Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS319F05f
         (315 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC062705-1|AAH62705.1|   98|Homo sapiens similar to DNA segment,...    66   3e-11
BC051802-1|AAH51802.1|   98|Homo sapiens similar to DNA segment,...    66   3e-11
BC095436-1|AAH95436.1|  108|Homo sapiens MGC71993 protein protein.     31   0.94 
BX538025-1|CAD97971.1| 2416|Homo sapiens hypothetical protein pr...    28   6.6  
AB002319-1|BAA20779.1| 1542|Homo sapiens KIAA0321 protein.             28   6.6  

>BC062705-1|AAH62705.1|   98|Homo sapiens similar to DNA segment,
           Chr 11, Brigham & Womens Genetics 0434 expressed
           protein.
          Length = 98

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
 Frame = +2

Query: 104 CGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEK---NPPHSIEDFVIEV 271
           CGPKL+ CG+VLS WG+I L ++G+F+ + +  L+ED+PF EK   N P +I +   +V
Sbjct: 7   CGPKLAACGIVLSAWGVIMLIMLGIFFNVHSAVLIEDVPFTEKDFENGPQNIYNLYEQV 65


>BC051802-1|AAH51802.1|   98|Homo sapiens similar to DNA segment,
           Chr 11, Brigham & Womens Genetics 0434 expressed
           protein.
          Length = 98

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
 Frame = +2

Query: 104 CGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEK---NPPHSIEDFVIEV 271
           CGPKL+ CG+VLS WG+I L ++G+F+ + +  L+ED+PF EK   N P +I +   +V
Sbjct: 7   CGPKLAACGIVLSAWGVIMLIMLGIFFNVHSAVLIEDVPFTEKDFENGPQNIYNLYEQV 65


>BC095436-1|AAH95436.1|  108|Homo sapiens MGC71993 protein protein.
          Length = 108

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = +2

Query: 167 LMGVFYYIRAVALLEDLPFDEK---NPPHSIEDFVIEV 271
           ++G+F+ + +  L+ED+PF EK   N P +I +   +V
Sbjct: 38  MLGIFFNVHSAVLIEDVPFTEKDFENGPQNIYNLYEQV 75


>BX538025-1|CAD97971.1| 2416|Homo sapiens hypothetical protein
            protein.
          Length = 2416

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 18/67 (26%), Positives = 29/67 (43%)
 Frame = +2

Query: 104  CGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIEVEKGY 283
            C   L+LC    S      LT +G    + A   L+DLP    + P + E+  +E +   
Sbjct: 1108 CCEPLALCSSRQSQQTSSLLTRLGTLAQLHASHCLDDLPLSTPSSPRTTENPTLERKPYS 1167

Query: 284  TPECTKL 304
            +P  + L
Sbjct: 1168 SPRDSSL 1174


>AB002319-1|BAA20779.1| 1542|Homo sapiens KIAA0321 protein.
          Length = 1542

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 18/67 (26%), Positives = 29/67 (43%)
 Frame = +2

Query: 104 CGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIEVEKGY 283
           C   L+LC    S      LT +G    + A   L+DLP    + P + E+  +E +   
Sbjct: 234 CCEPLALCSSRQSQQTSSLLTRLGTLAQLHASHCLDDLPLSTPSSPRTTENPTLERKPYS 293

Query: 284 TPECTKL 304
           +P  + L
Sbjct: 294 SPRDSSL 300


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,758,286
Number of Sequences: 237096
Number of extensions: 825641
Number of successful extensions: 5142
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5142
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)