Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS319F04f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0194 + 13645418-13645790,13645879-13647653                       30   0.98 
02_05_0969 + 33165396-33165935,33166352-33166883,33166988-331672...    28   5.2  
01_07_0238 + 42209407-42209964,42210039-42210561,42212577-422126...    27   9.1  

>01_03_0194 + 13645418-13645790,13645879-13647653
          Length = 715

 Score = 30.3 bits (65), Expect = 0.98
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2

Query: 361 DKYKCLFQGYGCILNICMCIIKILHLFPISGTCNTSS 251
           DKY  LF G  C+ N   C++    L P+ G  NTSS
Sbjct: 79  DKYYNLFHGLECVDNRAFCLLLWAALLPMVG-MNTSS 114


>02_05_0969 +
           33165396-33165935,33166352-33166883,33166988-33167242,
           33167515-33167606,33167745-33167942,33168049-33168240,
           33168341-33168562,33168858-33169024,33169117-33169210,
           33169308-33169364,33169459-33169587,33169681-33169752,
           33170180-33170293,33170419-33170580,33170666-33170794,
           33171057-33171158,33171266-33171342,33171470-33171592,
           33171666-33172227
          Length = 1272

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 152 EKRGYLFYSAYYKYNKYFTNNHATLTGSVISSLRTCVTGTRYR 280
           +KR Y   S   K  ++   N  TL G +ISSL       RYR
Sbjct: 771 QKRAYKVLSMLLKDTEFIERNLDTLLGLMISSLPCQFPSKRYR 813


>01_07_0238 +
           42209407-42209964,42210039-42210561,42212577-42212665,
           42212981-42213191,42213265-42213446,42213573-42213812,
           42214691-42214878,42215230-42215323,42215407-42215463,
           42215552-42215686,42216460-42216525,42216745-42216858,
           42217849-42218010,42218093-42218221,42218323-42218424,
           42219428-42219504,42219600-42219957
          Length = 1094

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -2

Query: 391 SNPDKGRYLYDKYKCLFQGYGCILNICMCIIKILHLFPISGT 266
           S+P+K  +L D  +CL Q  G   NIC   + ++  F +  T
Sbjct: 592 SSPEKRSHLKDALRCLAQLSGS-TNICNLFLSLVKRFGLEDT 632


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,316,426
Number of Sequences: 37544
Number of extensions: 246252
Number of successful extensions: 426
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)