Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS319F04f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   3.3  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   5.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   5.8  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   7.7  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   7.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   7.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.7  

>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 173 YSAYYKYNKYFTNNH 217
           YS Y  YN Y  NN+
Sbjct: 324 YSNYNNYNNYNNNNY 338


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 388 NPDKGRYLYDKYKCLFQGY 332
           N D  R + +KY+ +F GY
Sbjct: 108 NDDNFRNISEKYQEIFNGY 126


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 339 WKRHLYLSYKYLPLSG 386
           W+R+  +SYK++  SG
Sbjct: 77  WERYQPISYKWITRSG 92


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 173 YSAYYKYNKYFTNNH 217
           YS Y  YN  + NN+
Sbjct: 91  YSNYNNYNNNYNNNY 105


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 173 YSAYYKYNKYFTNNH 217
           YS Y  YN  + NN+
Sbjct: 91  YSNYNNYNNNYNNNY 105


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = +2

Query: 104 TLDGVILSVVSINASKEKRGYLFYSAYYKYNKYFTNNHATLTGSVISSLR 253
           TLDGV   V   + S+ +  ++  +       +FT +H ++   ++ SL+
Sbjct: 173 TLDGVNDVVQHQSGSEAEAEFVCIATPEAIELHFTTDHPSVAYLLVGSLK 222


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 370 YLYDKYKCLFQGYG 329
           Y+YD+Y C+  G G
Sbjct: 568 YVYDEYTCMDCGPG 581


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,180
Number of Sequences: 438
Number of extensions: 3174
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)