Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS319F01f
         (466 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ133776-1|CAB45384.1|  214|Homo sapiens neurogenin 3 protein.         32   0.85 
BC126468-1|AAI26469.1|  214|Homo sapiens neurogenin 3 protein.         32   1.1  
BC117488-1|AAI17489.1|  214|Homo sapiens neurogenin 3 protein.         32   1.1  
BC074939-1|AAH74939.1|  214|Homo sapiens neurogenin 3 protein.         32   1.1  
BC074938-1|AAH74938.1|  214|Homo sapiens neurogenin 3 protein.         32   1.1  
BC069098-1|AAH69098.1|  214|Homo sapiens neurogenin 3 protein.         32   1.1  
AL450311-1|CAH72729.1|  214|Homo sapiens neurogenin 3 protein.         32   1.1  
AF234829-1|AAK15022.1|  214|Homo sapiens neurogenin 3 protein.         32   1.1  

>AJ133776-1|CAB45384.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 32.3 bits (70), Expect = 0.85
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = +3

Query: 267 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSXSPANSPL 446
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTPGNCAEAEEGGCRGAPRKLRA 63

Query: 447 RR 452
           RR
Sbjct: 64  RR 65


>BC126468-1|AAI26469.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = +3

Query: 267 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSXSPANSPL 446
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 447 RR 452
           RR
Sbjct: 64  RR 65


>BC117488-1|AAI17489.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = +3

Query: 267 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSXSPANSPL 446
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 447 RR 452
           RR
Sbjct: 64  RR 65


>BC074939-1|AAH74939.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = +3

Query: 267 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSXSPANSPL 446
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 447 RR 452
           RR
Sbjct: 64  RR 65


>BC074938-1|AAH74938.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = +3

Query: 267 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSXSPANSPL 446
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 447 RR 452
           RR
Sbjct: 64  RR 65


>BC069098-1|AAH69098.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = +3

Query: 267 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSXSPANSPL 446
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 447 RR 452
           RR
Sbjct: 64  RR 65


>AL450311-1|CAH72729.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = +3

Query: 267 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSXSPANSPL 446
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 447 RR 452
           RR
Sbjct: 64  RR 65


>AF234829-1|AAK15022.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = +3

Query: 267 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSXSPANSPL 446
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 447 RR 452
           RR
Sbjct: 64  RR 65


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,661,103
Number of Sequences: 237096
Number of extensions: 1377364
Number of successful extensions: 2787
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2786
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)