Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS319D12f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   1.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.5  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   4.4  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   4.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.4  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +1

Query: 109  GLQHGSMTPVGLQHGGMTPAGLQHGAMTPVGLQHGGMTPAGLQHGG 246
            G+Q G   P G+Q G        +  +  V +   G+  +G QH G
Sbjct: 888  GVQ-GMNVPYGMQRGQSGGQTWSNSQVQGVAVPGSGIVASGQQHAG 932


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +1

Query: 289 GVSSGALLQVSGEVPMMPQVCGAEPVAALGSGRALSAPPPADHLAHSVP 435
           GV  G+   VS +V  + ++     ++   + +ALS     D+ A +VP
Sbjct: 72  GVIGGSYSSVSLQVANLLRLFHIPQISPASTAKALSDKTRFDYFARTVP 120


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
 Frame = -1

Query: 173 SPAG-VMPPCWSPTGVMLPCCRPAGVIPPCCNPTGVMPPCSNPPGVIPP 30
           SPAG  +PP        +P       +PP  N  G MP     P +  P
Sbjct: 403 SPAGGQLPPSAGAPMPPIPNMSNMSGMPPLPNMPGSMPTMPTMPSMAGP 451


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +1

Query: 289 GVSSGALLQVSGEVPMMPQVCGAEPVAALGSGRALSAPPPADHLAHSVP 435
           GV  G+   VS +V  + ++     ++   + +ALS     D+ A +VP
Sbjct: 162 GVIGGSYSSVSLQVANLLRLFHIPQISPASTAKALSDKTRFDYFARTVP 210


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 365 TGSAPHTCGIIGTS 324
           TG  P+TC I G S
Sbjct: 227 TGEKPYTCDICGKS 240


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 325 EVPMMPQVCGAEPVAALGSGRALSAPPPADHLA 423
           E P+MP+V  A            S PPP D ++
Sbjct: 640 EPPIMPRVQNATDTTNFDEYPPDSDPPPPDDIS 672


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -2

Query: 280 SCRHVVALPASYHRAAGPPGSYRRAAAPQASWLRAEVRP 164
           +C   VA    YH  A P G +  +A   A+ L   + P
Sbjct: 499 TCSGEVASLTEYHHVAPPSGHHASSAPLLAATLAGGLCP 537


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.314    0.136    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,075
Number of Sequences: 438
Number of extensions: 4004
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)