Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS319D05f
         (447 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101699-1|AAI01700.1|  278|Homo sapiens HUS1 checkpoint protein...    29   7.2  
BC101697-1|AAI01698.1|  278|Homo sapiens HUS1 checkpoint homolog...    29   7.2  
AY956763-1|AAX38250.1|  422|Homo sapiens heat shock protein 90Bb...    29   7.2  
AL357054-1|CAI15190.1|  278|Homo sapiens HUS1 checkpoint homolog...    29   7.2  
AF508547-1|AAM28904.1|  278|Homo sapiens HUS1B protein.                29   7.2  

>BC101699-1|AAI01700.1|  278|Homo sapiens HUS1 checkpoint protein B
           protein.
          Length = 278

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -1

Query: 273 IALVHXRASVLPLKITTHQVLGRILHFLHGFLLRVHRNRVWYECV 139
           + L H R   L + +     LGR    +H   +RV   RVW +C+
Sbjct: 102 LQLTHKRRPSLTVAVELVSSLGRARSVVHDLPVRVLPRRVWRDCL 146


>BC101697-1|AAI01698.1|  278|Homo sapiens HUS1 checkpoint homolog b
           (S. pombe) protein.
          Length = 278

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -1

Query: 273 IALVHXRASVLPLKITTHQVLGRILHFLHGFLLRVHRNRVWYECV 139
           + L H R   L + +     LGR    +H   +RV   RVW +C+
Sbjct: 102 LQLTHKRRPSLTVAVELVSSLGRARSVVHDLPVRVLPRRVWRDCL 146


>AY956763-1|AAX38250.1|  422|Homo sapiens heat shock protein 90Bb
           protein.
          Length = 422

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 127 MAEKHA-LIPDPITMYTQKETMKEVKDASKNLMGGDFERQ 243
           + EKH+  +  PIT+Y +KE  KE+ D       G+ E +
Sbjct: 164 VVEKHSQFLGYPITLYLEKEREKEISDGKAEEEKGEKEEE 203


>AL357054-1|CAI15190.1|  278|Homo sapiens HUS1 checkpoint homolog
           (S. pombe) protein.
          Length = 278

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -1

Query: 273 IALVHXRASVLPLKITTHQVLGRILHFLHGFLLRVHRNRVWYECV 139
           + L H R   L + +     LGR    +H   +RV   RVW +C+
Sbjct: 102 LQLTHKRRPSLTVAVELVSSLGRARSVVHDLPVRVLPRRVWRDCL 146


>AF508547-1|AAM28904.1|  278|Homo sapiens HUS1B protein.
          Length = 278

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -1

Query: 273 IALVHXRASVLPLKITTHQVLGRILHFLHGFLLRVHRNRVWYECV 139
           + L H R   L + +     LGR    +H   +RV   RVW +C+
Sbjct: 102 LQLTHKRRPSLTVAVELVSSLGRARSVVHDLPVRVLPRRVWRDCL 146


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,306,987
Number of Sequences: 237096
Number of extensions: 1247145
Number of successful extensions: 3050
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3050
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)