Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS319D04f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 75 2e-14
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 68 5e-12
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 67 8e-12
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 59 2e-09
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 49 2e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 47 7e-06
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 47 7e-06
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 47 7e-06
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 47 9e-06
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 46 2e-05
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 38 0.004
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 38 0.004
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 38 0.004
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 38 0.006
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 38 0.006
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 36 0.013
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 33 0.12
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 33 0.12
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 33 0.12
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 33 0.16
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 33 0.16
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 1.2
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 1.5
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 2.0
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 2.0
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 2.7
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 28 3.5
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 28 3.5
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 28 3.5
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 28 3.5
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z48045-7|CAA88098.1| 329|Caenorhabditis elegans Hypothetical pr... 27 8.1
U67954-7|AAP40534.1| 119|Caenorhabditis elegans Wrapper/rega-1/... 27 8.1
AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (... 27 8.1
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 75.4 bits (177), Expect = 2e-14
Identities = 33/99 (33%), Positives = 61/99 (61%)
Frame = +2
Query: 224 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN 403
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 404 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQ 520
P + + + +++PT IQ+ WPIAMSG++++ +A+
Sbjct: 137 LPGQIHE-LLYGKFQKPTVIQSISWPIAMSGRDIISIAK 174
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 67.7 bits (158), Expect = 5e-12
Identities = 29/95 (30%), Positives = 53/95 (55%)
Frame = +2
Query: 236 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 415
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 416 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQ 520
+ + ++ Y++PTPIQA P A+SG++++G+A+
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAK 310
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 66.9 bits (156), Expect = 8e-12
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = +2
Query: 329 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 509 GVAQ 520
GVA+
Sbjct: 343 GVAE 346
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 58.8 bits (136), Expect = 2e-09
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Frame = +2
Query: 224 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEA 400
+ + D V + F KNFY + + + EV+ YR + + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 401 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQ 520
+ +K Y +PT IQAQ P MSG++++G+A+
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAK 349
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 48.8 bits (111), Expect = 2e-06
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 347 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQ 520
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+ AQ
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQ 211
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 47.2 bits (107), Expect = 7e-06
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +2
Query: 323 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 502
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 503 LVGVAQ 520
L+ AQ
Sbjct: 179 LMSCAQ 184
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 47.2 bits (107), Expect = 7e-06
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +2
Query: 323 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 502
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 503 LVGVAQ 520
L+ AQ
Sbjct: 163 LMSCAQ 168
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 47.2 bits (107), Expect = 7e-06
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +2
Query: 323 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 502
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 503 LVGVAQ 520
L+ AQ
Sbjct: 160 LMSCAQ 165
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 46.8 bits (106), Expect = 9e-06
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 284 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 460
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 461 IQAQGWPIAMSGKNLVGVA 517
IQ QG P+A+SG++++G+A
Sbjct: 216 IQIQGIPVALSGRDMIGIA 234
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/56 (35%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +2
Query: 356 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQ 520
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ +GV+Q
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQ 129
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQ 520
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQ
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQ 386
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQ 520
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQ
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQ 386
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQ 520
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQ
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQ 386
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQ 520
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQ
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQ 343
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQ 520
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQ
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQ 343
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 517
FE+ N + + GY +PTPIQ P+A++GK++ A
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACA 192
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 33.1 bits (72), Expect = 0.12
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQ 520
F EAN + +++ V GY + TPIQ P+ G +++ AQ
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQ 597
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 33.1 bits (72), Expect = 0.12
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQ 520
F EAN + +++ V GY + TPIQ P+ G +++ AQ
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQ 597
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 33.1 bits (72), Expect = 0.12
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQ 520
F EAN + +++ V GY + TPIQ P+ G +++ AQ
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQ 597
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 32.7 bits (71), Expect = 0.16
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 371 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQ 520
H +++ V + ++ G+ +PTPIQ + P M GK++V +++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSR 69
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 32.7 bits (71), Expect = 0.16
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 371 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQ 520
H +++ V + ++ G+ +PTPIQ + P M GK++V +++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSR 69
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 4 PASERIHSLNKHLQLNPKNNHVW 72
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 90 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 206
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 407 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAQ 520
P+ V + ++ MG+ EPT IQ+ P A+ + +++G A+
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAE 201
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -2
Query: 502 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 323
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 322 D 320
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -2
Query: 502 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 323
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 322 D 320
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 145 RRIIAEFVASSKFGTTVSTAIIPV 74
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 145 RRIIAEFVASSKFGTTVSTAIIPV 74
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -2
Query: 238 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 59
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 58 FSDLVEDVYLNYGFFLTQ 5
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -2
Query: 238 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 59
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 58 FSDLVEDVYLNYGFFLTQ 5
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -2
Query: 238 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 59
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 58 FSDLVEDVYLNYGFFLTQ 5
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -2
Query: 238 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 59
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 58 FSDLVEDVYLNYGFFLTQ 5
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 284 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 442
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 284 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 442
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>Z48045-7|CAA88098.1| 329|Caenorhabditis elegans Hypothetical
protein C41C4.1 protein.
Length = 329
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -1
Query: 233 GVACSALQRILFSHQSLQILQIYCHR-CQTETNYRRI 126
GVAC F + IL+++ HR C + YRR+
Sbjct: 100 GVACVLYDTGKFMRNNRSILEVWSHRFCGEKNEYRRM 136
>U67954-7|AAP40534.1| 119|Caenorhabditis elegans
Wrapper/rega-1/klingon homologprotein 1, isoform d
protein.
Length = 119
Score = 27.1 bits (57), Expect = 8.1
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +3
Query: 111 LEEATNSAIIRLGLATVAIDLEDLEALVGKKNSLEGRTCDAQIGILFHSNLSTKTFMIHI 290
+E+ + + I R VA+D E L+ G + S+EG + ++ L TK + +
Sbjct: 41 VEDPSVAIIWRKNTEVVAVDDEILDTYGGYEISMEGSVTRFNLHLIRIKGL-TKFSLSSL 99
Query: 291 LQFSKD---HHMKSKSIEI 338
+ S D HH +S++ ++
Sbjct: 100 FEISSDICAHHQESRANQL 118
>AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (grd
related) protein13 protein.
Length = 273
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 257 QPFNK-NFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQ 385
QP++ +F P PT++++ PY Y H + + + HN Q
Sbjct: 63 QPYSPVSFRPPPPTIIQQQPY----YSVPHPIPIQTQQFHNSYQ 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,885,859
Number of Sequences: 27780
Number of extensions: 220673
Number of successful extensions: 798
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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