Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS319C04f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 90 2e-19
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 54 1e-08
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 54 2e-08
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 48 8e-07
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 42 4e-05
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 38 0.001
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 36 0.004
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 32 0.045
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 31 0.14
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 3.9
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 3.9
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 25 5.2
SPAC1851.02 |||1-acylglycerol-3-phosphate O-acyltransferase|Schi... 25 5.2
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 25 9.0
SPAC26A3.02 |myh1|myh|adenine DNA glycosylase |Schizosaccharomyc... 25 9.0
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 89.8 bits (213), Expect = 2e-19
Identities = 42/66 (63%), Positives = 50/66 (75%)
Frame = +1
Query: 286 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 465
+GPKVT V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G GY+GS FHRVI
Sbjct: 21 RGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVI 80
Query: 466 KNFMIQ 483
NFMIQ
Sbjct: 81 PNFMIQ 86
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 54.4 bits (125), Expect = 1e-08
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = +1
Query: 316 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 483
FD+ +G IV LF VPKT NF L +G GY GS FHRVI FM+Q
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQ 61
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 53.6 bits (123), Expect = 2e-08
Identities = 32/63 (50%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +1
Query: 307 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNF 474
K+S D KI TI LF VPKT +NF L E +G YKGS+FHRVIKNF
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNF 63
Query: 475 MIQ 483
M+Q
Sbjct: 64 MLQ 66
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 48.0 bits (109), Expect = 8e-07
Identities = 31/66 (46%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Frame = +1
Query: 310 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVI 465
V D+ I +G I I LF VPKT ENF Q QKP G YK S FHR+I
Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRII 64
Query: 466 KNFMIQ 483
+ FMIQ
Sbjct: 65 QGFMIQ 70
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 42.3 bits (95), Expect = 4e-05
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +1
Query: 340 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 483
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQ 53
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 37.9 bits (84), Expect = 0.001
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +1
Query: 346 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 483
G I I L+ + PK +NF A E Y + FHR+IKNFMIQ
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQ 506
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 35.9 bits (79), Expect = 0.004
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = +1
Query: 346 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 483
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQ 64
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 32.3 bits (70), Expect = 0.045
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 334 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 483
+ +G +VI LF K PKT ENF +L + + Y F+ + N+ Q
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQ 52
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 30.7 bits (66), Expect = 0.14
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 340 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 483
N G I I L P NF QLA++ Y+ + FHR I FMIQ
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQ 327
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 3.9
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 332 PIFMSKLTL*VTLG-PLGISSDLALAMNNKIPKAIVRVPMIKTSLVRFL 189
PIF KL + +TLG L ISS + + KA V ++ TS + FL
Sbjct: 3530 PIFQGKLDMAITLGHKLSISSAKLSTICRSVLKASVNSALL-TSWICFL 3577
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 204 FSSFPCYFYKIRFECLFFQNLRY 136
FSSF F+++ F C FF L Y
Sbjct: 11 FSSFESLFFRLFFVCSFFFPLLY 33
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -3
Query: 519 PSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLS 370
PSS + L K+ LDH + + S P P +++ K+ S L+ + S
Sbjct: 187 PSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSS 236
>SPAC1851.02 |||1-acylglycerol-3-phosphate
O-acyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 279
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 160 TFETNFVKIARKRTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKV 312
TF N+ IA+K + V I+G + ++ S +SD I K ++
Sbjct: 119 TFGPNYSVIAKKSLRYVPILGWFMILSDVVFIDRSRRSDAIQLFAKAARRM 169
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = -3
Query: 201 SSFPCYFYKIRFECLFFQNLRYKIRNLI*KPSQFTILLIRNNHTVLSLASSVEL 40
++ P + Y E L+ + +I +L+ +P+Q + +I + H+ + S++EL
Sbjct: 323 NAIPEHGYLHSSELLYPEGTEQQIISLVDEPNQNALWIIEHEHSQDNNRSNIEL 376
>SPAC26A3.02 |myh1|myh|adenine DNA glycosylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 461
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 355 VIGLFGKTVPKTTENFFQLAQKP 423
++ +F KT P T E FF + ++P
Sbjct: 302 LVVIFQKTDPSTKEKFFLIRKRP 324
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,030,333
Number of Sequences: 5004
Number of extensions: 39021
Number of successful extensions: 111
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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