Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS319C02f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 118 4e-27
10_08_0620 - 19321612-19323237 66 2e-11
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 65 3e-11
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 58 6e-09
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 57 7e-09
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 54 7e-08
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 54 9e-08
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 50 1e-06
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 46 1e-05
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 43 1e-04
03_01_0122 + 954356-954491,954877-955030,955141-955231,955732-95... 33 0.14
07_03_0436 - 18188221-18188373,18189121-18189233,18189817-181898... 29 2.3
01_06_1322 - 36290275-36291693,36291837-36291954,36292485-36292516 28 4.0
11_04_0460 - 17955102-17955146,17955253-17955310,17955442-179555... 28 5.2
10_01_0181 - 2041502-2043013 27 9.1
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 27 9.1
01_05_0657 + 24034198-24036306 27 9.1
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 118 bits (283), Expect = 4e-27
Identities = 60/109 (55%), Positives = 74/109 (67%), Gaps = 1/109 (0%)
Frame = -1
Query: 518 HSLQLAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTH-GVDVIS 342
H+ +AGK Q IPRQL DNAG D T +LNKLRQKHA+GE + GVD+ +
Sbjct: 426 HARTIAGKSQFFVNSFAKALEVIPRQLCDNAGFDATDVLNKLRQKHASGEGANFGVDINT 485
Query: 341 GEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIKNVKGGEEAQ 195
G + D+FA VWEPA+VK+NA++AA EA ILSVDET+KN K E AQ
Sbjct: 486 GGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK-SESAQ 533
>10_08_0620 - 19321612-19323237
Length = 541
Score = 65.7 bits (153), Expect = 2e-11
Identities = 33/95 (34%), Positives = 49/95 (51%)
Frame = -1
Query: 509 QLAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVV 330
+L G E IP LA+NAGLD + +LR +HA GE G++V G +
Sbjct: 444 ELRGMESYCVREFAEALEVIPYTLAENAGLDPISTVTELRNRHAKGEKNAGINVRKGRIT 503
Query: 329 DNFAKCVWEPALVKLNAVSAACEATAQILSVDETI 225
+ + V +P LV +AV+ ACE IL +D+ +
Sbjct: 504 NILEENVVQPLLVSTSAVTLACECVRMILKIDDIV 538
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 65.3 bits (152), Expect = 3e-11
Identities = 31/95 (32%), Positives = 51/95 (53%)
Frame = -1
Query: 509 QLAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVV 330
+L G E IP LA+NAGL+ ++ +LR +HA GE G++V G++
Sbjct: 453 ELQGMESYCIKEFAEALEVIPYTLAENAGLNPISIVTELRNRHAKGEKNAGINVRKGQIT 512
Query: 329 DNFAKCVWEPALVKLNAVSAACEATAQILSVDETI 225
+ + V +P LV +A++ ACE IL +D+ +
Sbjct: 513 NILEENVVQPLLVSTSAITLACECVRMILKIDDIV 547
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 57.6 bits (133), Expect = 6e-09
Identities = 33/76 (43%), Positives = 44/76 (57%)
Frame = -1
Query: 452 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVS 273
IP +ADNAGLD L+++LR +H T G+DVI+G V D + + E VK +
Sbjct: 439 IPTIIADNAGLDSAELISQLRAEHHKENCTAGIDVITGSVGDMQKRGISEAFKVKQAILL 498
Query: 272 AACEATAQILSVDETI 225
+A EA IL VDE I
Sbjct: 499 SATEAAEMILRVDEII 514
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 57.2 bits (132), Expect = 7e-09
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = -1
Query: 452 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTH-GVDVISGEVVDNFAKCVWEPALVKLNAV 276
IPR L N GL+ + +L+ KHA GE+ G+D SG++VD + +W+ VK
Sbjct: 449 IPRTLLQNCGLNVIRTMTQLQGKHANGENAWVGIDGSSGDIVDMKERKIWDSYSVKAQTF 508
Query: 275 SAACEATAQILSVDETIKNVK 213
A EA +L +D+ + +K
Sbjct: 509 KTAIEAACMLLRIDDIVSGIK 529
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 54.0 bits (124), Expect = 7e-08
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = -1
Query: 452 IPRQLADNAGLDGTGLLNKLRQK---HAAGEHTH-GVDVISGEVVDNFAKCVWEPALVKL 285
IPR LA N GL+ ++ +L+ K HA GE+ G+D SG++VD + +W+ VK
Sbjct: 449 IPRTLAQNCGLNVIRIMTQLQGKDMLHANGENAWVGIDGRSGDIVDMKERKIWDSYSVKA 508
Query: 284 NAVSAACEATAQILSVDETIKNVK 213
A EA +L +D+ + +K
Sbjct: 509 QTFKTAIEAACMLLRIDDIVSGIK 532
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 53.6 bits (123), Expect = 9e-08
Identities = 29/97 (29%), Positives = 47/97 (48%)
Frame = -1
Query: 515 SLQLAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGE 336
SL+ G +Q +PR LA+NAGL +++ L +HA G G+D+ G
Sbjct: 425 SLKETGLDQYAIAKFAESFEMVPRTLAENAGLSAMEIISSLYAEHAGGNTKVGIDLEEGG 484
Query: 335 VVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETI 225
D +W+ + KL A+ + +A +L VD+ I
Sbjct: 485 CKDVSIMKIWDLYVTKLFALKYSADAACTVLRVDQII 521
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 50.0 bits (114), Expect = 1e-06
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Frame = -1
Query: 506 LAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKH------AAGEH--THGVD 351
L +EQL IP+ L+ NA D T L+ KLR H A +H + G+D
Sbjct: 415 LGSREQLAIAEFAESLLIIPKVLSVNAAKDATELVAKLRAYHHTAQTKADKQHFSSMGLD 474
Query: 350 VISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIKNVK---GGEE 201
+ G + +N V EPA+ K+ + A EA IL +D+ IK K G EE
Sbjct: 475 LSKGIIRNNLEYGVIEPAMSKVKIIQFATEAAITILRIDDMIKLTKEESGNEE 527
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 46.4 bits (105), Expect = 1e-05
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Frame = -1
Query: 452 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISG-----------EVVDNFAKCVW 306
IP +ADNAGLD L+++LR +H + T G+DVISG +V D +
Sbjct: 416 IPTIIADNAGLDSADLISQLRAEHHKEQSTAGIDVISGGGLELILRLLPQVGDMEKLGIS 475
Query: 305 EPALVKLNAVSAACEATAQILSVDETI 225
E K + +A EA IL VDE +
Sbjct: 476 ESFKAKQAVLMSATEAAEMILRVDEIV 502
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/93 (29%), Positives = 48/93 (51%)
Frame = -1
Query: 500 GKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNF 321
G+ QL IP+ LA+N+GLD ++ L+ +H G G++ SGE +D
Sbjct: 451 GRAQLGVEAFADALLVIPKTLAENSGLDTQDVIVSLQNEHDRG-LVVGLNHHSGEPIDPQ 509
Query: 320 AKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
+ +++ VK +++ +Q+L VDE I+
Sbjct: 510 MEGIFDNYSVKRQIINSGPIIASQLLLVDEVIR 542
>03_01_0122 +
954356-954491,954877-955030,955141-955231,955732-955806,
955884-955972,956084-956202,956338-956478,956817-956893,
958615-959217
Length = 494
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -2
Query: 292 SSLTP*VPPARPPLRFYQWMRPSRMSRAVKRRRCLVAAWAALVWDRTRQWLIT 134
S+ +P A P LR RPSR S + ++ AAL D RQW++T
Sbjct: 8 SAASPSTSSAAPRLRHVARRRPSRRSACPRSAASRLSIMAALGEDPIRQWILT 60
>07_03_0436 -
18188221-18188373,18189121-18189233,18189817-18189889,
18189979-18190046,18190132-18190372,18191614-18191732,
18192977-18193028,18193178-18193192
Length = 277
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -2
Query: 319 RSACGS-RPSSSLTP*VPPARPPLRFY 242
R ACG+ RPS SL+P VPP PP Y
Sbjct: 48 RGACGAPRPSPSLSPRVPP--PPAAGY 72
>01_06_1322 - 36290275-36291693,36291837-36291954,36292485-36292516
Length = 522
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 440 ADEGWPQRLGPLPLQPTAP 496
A GW + GP+P+QP AP
Sbjct: 207 AFRGWNRLSGPIPMQPVAP 225
>11_04_0460 -
17955102-17955146,17955253-17955310,17955442-17955593,
17955888-17955993,17956101-17956222,17956766-17956834,
17956969-17957214,17957331-17957373,17957449-17957520,
17957954-17958066,17958158-17958238,17958343-17958415,
17959413-17959519,17960410-17960514,17960684-17960974,
17961621-17961707,17961774-17961842,17961917-17961973,
17962057-17962155,17962223-17962312,17962395-17962511,
17964164-17964244,17964353-17964502,17964812-17964956,
17967359-17967510,17967647-17967784,17967838-17967914,
17968032-17968134
Length = 1015
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -2
Query: 322 LRSACGSRPSSSLTP*VPPARPP 254
L +A S PSS+L P PPA PP
Sbjct: 475 LPAAYSSTPSSTLRPAPPPAAPP 497
>10_01_0181 - 2041502-2043013
Length = 503
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 353 DVISGEVVDNFA-KCVWEPALVKLNAVSAACEATAQILSVDETIKNVK 213
D+I+G V + VWE L +SA C A ++LS T K K
Sbjct: 452 DIIAGSVTMPMKFQLVWESRLAPYTVISATCGA-EELLSTTSTRKKRK 498
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = -1
Query: 440 LADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVSAACE 261
+A NAG+DG ++ KL ++ G D GE VD + +P V A+ A
Sbjct: 589 IAANAGIDGGVVIGKLIEQ---DNLNMGYDAARGEYVDMIKAGIIDPVKVIRTALQDASS 645
Query: 260 ATAQILSVDETI 225
+ + + + +
Sbjct: 646 VSLLMTTTEAAV 657
>01_05_0657 + 24034198-24036306
Length = 702
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 505 WLARSSWL*RQWPEPLRPSLVSWQTMQAW 419
++AR SW RQW L + S+++ ++W
Sbjct: 396 YVARESWSSRQWVANLIGCITSFKSFRSW 424
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,653,099
Number of Sequences: 37544
Number of extensions: 304840
Number of successful extensions: 923
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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