BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS319C02f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122201-1|AAM52713.1| 544|Drosophila melanogaster LD47396p pro... 124 1e-28
AE014297-822|AAF54292.2| 544|Drosophila melanogaster CG8351-PA ... 124 1e-28
AY128484-1|AAM75077.1| 533|Drosophila melanogaster RE61939p pro... 64 1e-10
AE014134-2227|AAF53210.1| 533|Drosophila melanogaster CG5525-PA... 64 1e-10
X95602-1|CAA64860.1| 545|Drosophila melanogaster CCT-gamma prot... 60 1e-09
U31961-17|AAA84416.1| 531|Drosophila melanogaster protein ( Dro... 60 1e-09
AY089543-1|AAL90281.1| 544|Drosophila melanogaster LD20933p pro... 60 1e-09
AE014297-2252|AAN13716.1| 544|Drosophila melanogaster CG8977-PB... 60 1e-09
AE014297-2251|AAF55350.1| 544|Drosophila melanogaster CG8977-PA... 60 1e-09
AY058756-1|AAL13985.1| 535|Drosophila melanogaster SD02216p pro... 58 7e-09
AE014298-1271|AAO41641.1| 533|Drosophila melanogaster CG7033-PC... 58 7e-09
AE014298-1270|AAN09241.1| 533|Drosophila melanogaster CG7033-PB... 58 7e-09
AE014298-1269|AAF46442.2| 535|Drosophila melanogaster CG7033-PA... 58 7e-09
M21159-1|AAA28927.1| 557|Drosophila melanogaster protein ( D.me... 55 5e-08
AY118416-1|AAM48445.1| 557|Drosophila melanogaster RE70560p pro... 55 5e-08
AE014297-3168|AAN13906.1| 557|Drosophila melanogaster CG5374-PB... 55 5e-08
AE014297-3167|AAF56009.1| 557|Drosophila melanogaster CG5374-PA... 55 5e-08
AY051470-1|AAK92894.1| 533|Drosophila melanogaster GH13725p pro... 37 0.014
AE014298-2206|AAF48503.1| 533|Drosophila melanogaster CG8231-PA... 37 0.014
AY058545-1|AAL13774.1| 546|Drosophila melanogaster LD24495p pro... 36 0.025
AE013599-736|AAF59029.3| 546|Drosophila melanogaster CG8258-PA ... 36 0.025
BT011330-1|AAR96122.1| 504|Drosophila melanogaster SD21550p pro... 28 6.7
BT010018-1|AAQ22487.1| 605|Drosophila melanogaster RE15062p pro... 28 6.7
AE013599-1291|AAM68734.1| 504|Drosophila melanogaster CG13204-P... 28 6.7
AE013599-1290|AAF58652.1| 605|Drosophila melanogaster CG13204-P... 28 6.7
>AY122201-1|AAM52713.1| 544|Drosophila melanogaster LD47396p
protein.
Length = 544
Score = 124 bits (298), Expect = 1e-28
Identities = 57/105 (54%), Positives = 73/105 (69%)
Frame = -1
Query: 518 HSLQLAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISG 339
+S +AGKEQL IPRQL DNAG D T +LNKLRQKHA G +GVD+
Sbjct: 422 YSRTIAGKEQLLIAAIAKGLEIIPRQLCDNAGFDATNILNKLRQKHAQGGQWYGVDINKE 481
Query: 338 EVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIKNVKGGE 204
++ DN+ +CVWEP+++K+NA++AA EA ILSVDETIK+ K GE
Sbjct: 482 DISDNYEQCVWEPSIIKINALTAAAEAACMILSVDETIKSPKAGE 526
>AE014297-822|AAF54292.2| 544|Drosophila melanogaster CG8351-PA
protein.
Length = 544
Score = 124 bits (298), Expect = 1e-28
Identities = 57/105 (54%), Positives = 73/105 (69%)
Frame = -1
Query: 518 HSLQLAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISG 339
+S +AGKEQL IPRQL DNAG D T +LNKLRQKHA G +GVD+
Sbjct: 422 YSRTIAGKEQLLIAAIAKGLEIIPRQLCDNAGFDATNILNKLRQKHAQGGQWYGVDINKE 481
Query: 338 EVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIKNVKGGE 204
++ DN+ +CVWEP+++K+NA++AA EA ILSVDETIK+ K GE
Sbjct: 482 DISDNYEQCVWEPSIIKINALTAAAEAACMILSVDETIKSPKAGE 526
>AY128484-1|AAM75077.1| 533|Drosophila melanogaster RE61939p
protein.
Length = 533
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/76 (38%), Positives = 47/76 (61%)
Frame = -1
Query: 452 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVS 273
IP LA+NAGL+ + +LR +HA GE G++V G + D FA+ V +P LV +++++
Sbjct: 454 IPSTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGAITDIFAENVVQPLLVSISSIT 513
Query: 272 AACEATAQILSVDETI 225
A E IL +D+ +
Sbjct: 514 LATETIRSILKIDDIV 529
>AE014134-2227|AAF53210.1| 533|Drosophila melanogaster CG5525-PA
protein.
Length = 533
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/76 (38%), Positives = 47/76 (61%)
Frame = -1
Query: 452 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVS 273
IP LA+NAGL+ + +LR +HA GE G++V G + D FA+ V +P LV +++++
Sbjct: 454 IPSTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGAITDIFAENVVQPLLVSISSIT 513
Query: 272 AACEATAQILSVDETI 225
A E IL +D+ +
Sbjct: 514 LATETIRSILKIDDIV 529
>X95602-1|CAA64860.1| 545|Drosophila melanogaster CCT-gamma protein
protein.
Length = 545
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = -1
Query: 452 IPRQLADNAGLDGTGLLNKLRQKHAA----GEHTHGVDVISGEVVDNFAKCVWEPALVKL 285
IPR LA N G + L LR KHA+ G G+D SGE+VD K +WEP VKL
Sbjct: 444 IPRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKL 503
Query: 284 NAVSAACEATAQILSVDETIKNVK--GGEE 201
A E +L +D+ + K GG E
Sbjct: 504 QTYKTAVETAILLLRIDDIVSGSKKRGGNE 533
>U31961-17|AAA84416.1| 531|Drosophila melanogaster protein (
Drosophila melanogasterbithorax complex (BX-C), complete
sequence. ).
Length = 531
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = -1
Query: 452 IPRQLADNAGLDGTGLLNKLRQKHAA----GEHTHGVDVISGEVVDNFAKCVWEPALVKL 285
IPR LA N G + L LR KHA+ G G+D SGE+VD K +WEP VKL
Sbjct: 430 IPRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKL 489
Query: 284 NAVSAACEATAQILSVDETIKNVK--GGEE 201
A E +L +D+ + K GG E
Sbjct: 490 QTYKTAVETAILLLRIDDIVSGSKKRGGNE 519
>AY089543-1|AAL90281.1| 544|Drosophila melanogaster LD20933p
protein.
Length = 544
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = -1
Query: 452 IPRQLADNAGLDGTGLLNKLRQKHAA----GEHTHGVDVISGEVVDNFAKCVWEPALVKL 285
IPR LA N G + L LR KHA+ G G+D SGE+VD K +WEP VKL
Sbjct: 443 IPRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKL 502
Query: 284 NAVSAACEATAQILSVDETIKNVK--GGEE 201
A E +L +D+ + K GG E
Sbjct: 503 QTYKTAVETAILLLRIDDIVSGSKKRGGNE 532
>AE014297-2252|AAN13716.1| 544|Drosophila melanogaster CG8977-PB,
isoform B protein.
Length = 544
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = -1
Query: 452 IPRQLADNAGLDGTGLLNKLRQKHAA----GEHTHGVDVISGEVVDNFAKCVWEPALVKL 285
IPR LA N G + L LR KHA+ G G+D SGE+VD K +WEP VKL
Sbjct: 443 IPRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKL 502
Query: 284 NAVSAACEATAQILSVDETIKNVK--GGEE 201
A E +L +D+ + K GG E
Sbjct: 503 QTYKTAVETAILLLRIDDIVSGSKKRGGNE 532
>AE014297-2251|AAF55350.1| 544|Drosophila melanogaster CG8977-PA,
isoform A protein.
Length = 544
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = -1
Query: 452 IPRQLADNAGLDGTGLLNKLRQKHAA----GEHTHGVDVISGEVVDNFAKCVWEPALVKL 285
IPR LA N G + L LR KHA+ G G+D SGE+VD K +WEP VKL
Sbjct: 443 IPRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKL 502
Query: 284 NAVSAACEATAQILSVDETIKNVK--GGEE 201
A E +L +D+ + K GG E
Sbjct: 503 QTYKTAVETAILLLRIDDIVSGSKKRGGNE 532
>AY058756-1|AAL13985.1| 535|Drosophila melanogaster SD02216p
protein.
Length = 535
Score = 58.0 bits (134), Expect = 7e-09
Identities = 33/93 (35%), Positives = 48/93 (51%)
Frame = -1
Query: 500 GKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNF 321
GKE + ++P +ADNAG D L+++LR HA G+ T G+D+ G+V D
Sbjct: 430 GKEAIAIEAFARALLSLPTAIADNAGYDSAQLVSELRAGHAQGKQTLGLDMELGKVADVR 489
Query: 320 AKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
+ E VK + +A EA IL VD I+
Sbjct: 490 ELGITESFAVKRQVLMSASEAAEMILRVDNIIR 522
>AE014298-1271|AAO41641.1| 533|Drosophila melanogaster CG7033-PC,
isoform C protein.
Length = 533
Score = 58.0 bits (134), Expect = 7e-09
Identities = 33/93 (35%), Positives = 48/93 (51%)
Frame = -1
Query: 500 GKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNF 321
GKE + ++P +ADNAG D L+++LR HA G+ T G+D+ G+V D
Sbjct: 428 GKEAIAIEAFARALLSLPTAIADNAGYDSAQLVSELRAGHAQGKQTLGLDMELGKVADVR 487
Query: 320 AKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
+ E VK + +A EA IL VD I+
Sbjct: 488 ELGITESFAVKRQVLMSASEAAEMILRVDNIIR 520
>AE014298-1270|AAN09241.1| 533|Drosophila melanogaster CG7033-PB,
isoform B protein.
Length = 533
Score = 58.0 bits (134), Expect = 7e-09
Identities = 33/93 (35%), Positives = 48/93 (51%)
Frame = -1
Query: 500 GKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNF 321
GKE + ++P +ADNAG D L+++LR HA G+ T G+D+ G+V D
Sbjct: 428 GKEAIAIEAFARALLSLPTAIADNAGYDSAQLVSELRAGHAQGKQTLGLDMELGKVADVR 487
Query: 320 AKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
+ E VK + +A EA IL VD I+
Sbjct: 488 ELGITESFAVKRQVLMSASEAAEMILRVDNIIR 520
>AE014298-1269|AAF46442.2| 535|Drosophila melanogaster CG7033-PA,
isoform A protein.
Length = 535
Score = 58.0 bits (134), Expect = 7e-09
Identities = 33/93 (35%), Positives = 48/93 (51%)
Frame = -1
Query: 500 GKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNF 321
GKE + ++P +ADNAG D L+++LR HA G+ T G+D+ G+V D
Sbjct: 430 GKEAIAIEAFARALLSLPTAIADNAGYDSAQLVSELRAGHAQGKQTLGLDMELGKVADVR 489
Query: 320 AKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
+ E VK + +A EA IL VD I+
Sbjct: 490 ELGITESFAVKRQVLMSASEAAEMILRVDNIIR 522
>M21159-1|AAA28927.1| 557|Drosophila melanogaster protein (
D.melanogaster T complexprotein 1 (Tcp-1) mRNA, complete
cds. ).
Length = 557
Score = 55.2 bits (127), Expect = 5e-08
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Frame = -1
Query: 506 LAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTH--------GVD 351
LA +EQL IP+ L+ NA D T L+ KLR H + + G+D
Sbjct: 433 LASREQLAIAEFAKSLLVIPKTLSVNAAKDATDLVAKLRSYHNSSQTKPERSDLKWTGLD 492
Query: 350 VISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
+I G V DN V EPA+ K+ ++ A EA IL +D+ IK
Sbjct: 493 LIEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIK 535
>AY118416-1|AAM48445.1| 557|Drosophila melanogaster RE70560p
protein.
Length = 557
Score = 55.2 bits (127), Expect = 5e-08
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Frame = -1
Query: 506 LAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTH--------GVD 351
LA +EQL IP+ L+ NA D T L+ KLR H + + G+D
Sbjct: 433 LASREQLAIAEFAKSLLVIPKTLSVNAAKDATDLVAKLRSYHNSSQTKPERSDLKWTGLD 492
Query: 350 VISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
+I G V DN V EPA+ K+ ++ A EA IL +D+ IK
Sbjct: 493 LIEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIK 535
>AE014297-3168|AAN13906.1| 557|Drosophila melanogaster CG5374-PB,
isoform B protein.
Length = 557
Score = 55.2 bits (127), Expect = 5e-08
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Frame = -1
Query: 506 LAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTH--------GVD 351
LA +EQL IP+ L+ NA D T L+ KLR H + + G+D
Sbjct: 433 LASREQLAIAEFAKSLLVIPKTLSVNAAKDATDLVAKLRSYHNSSQTKPERSDLKWTGLD 492
Query: 350 VISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
+I G V DN V EPA+ K+ ++ A EA IL +D+ IK
Sbjct: 493 LIEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIK 535
>AE014297-3167|AAF56009.1| 557|Drosophila melanogaster CG5374-PA,
isoform A protein.
Length = 557
Score = 55.2 bits (127), Expect = 5e-08
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Frame = -1
Query: 506 LAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTH--------GVD 351
LA +EQL IP+ L+ NA D T L+ KLR H + + G+D
Sbjct: 433 LASREQLAIAEFAKSLLVIPKTLSVNAAKDATDLVAKLRSYHNSSQTKPERSDLKWTGLD 492
Query: 350 VISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
+I G V DN V EPA+ K+ ++ A EA IL +D+ IK
Sbjct: 493 LIEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIK 535
>AY051470-1|AAK92894.1| 533|Drosophila melanogaster GH13725p
protein.
Length = 533
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/95 (24%), Positives = 43/95 (45%)
Frame = -1
Query: 506 LAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVD 327
+ GK +L IP+ LA N+G D + KL + G+D+ +GE +
Sbjct: 431 IKGKSRLAVQAFADALLVIPKTLAVNSGYDAQDTIVKLTVEDRLSPELVGLDLATGEPMK 490
Query: 326 NFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
V++ +VK +++ + +L VDE ++
Sbjct: 491 PVDLGVYDNYIVKKQILNSCSIIASNLLLVDEVMR 525
>AE014298-2206|AAF48503.1| 533|Drosophila melanogaster CG8231-PA
protein.
Length = 533
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/95 (24%), Positives = 43/95 (45%)
Frame = -1
Query: 506 LAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVD 327
+ GK +L IP+ LA N+G D + KL + G+D+ +GE +
Sbjct: 431 IKGKSRLAVQAFADALLVIPKTLAVNSGYDAQDTIVKLTVEDRLSPELVGLDLATGEPMK 490
Query: 326 NFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
V++ +VK +++ + +L VDE ++
Sbjct: 491 PVDLGVYDNYIVKKQILNSCSIIASNLLLVDEVMR 525
>AY058545-1|AAL13774.1| 546|Drosophila melanogaster LD24495p
protein.
Length = 546
Score = 36.3 bits (80), Expect = 0.025
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Frame = -1
Query: 506 LAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKH--AAGEHTHGVDVIS--G 339
L G +Q P+ LA+N+G++GT ++N+L H AG+ T G D+ +
Sbjct: 430 LPGLDQYAVRKFANALEVFPKALAENSGINGTEIVNQLYLAHNNEAGK-TIGFDIEAEKA 488
Query: 338 EVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIKNVKGG 207
+D +++ K + A A A IL VD+ I + G
Sbjct: 489 STIDTTKAKLFDLYQSKFWGLKYAVGAAATILKVDQIIMAKRAG 532
>AE013599-736|AAF59029.3| 546|Drosophila melanogaster CG8258-PA
protein.
Length = 546
Score = 36.3 bits (80), Expect = 0.025
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Frame = -1
Query: 506 LAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKH--AAGEHTHGVDVIS--G 339
L G +Q P+ LA+N+G++GT ++N+L H AG+ T G D+ +
Sbjct: 430 LPGLDQYAVRKFANALEVFPKALAENSGINGTEIVNQLYLAHNNEAGK-TIGFDIEAEKA 488
Query: 338 EVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIKNVKGG 207
+D +++ K + A A A IL VD+ I + G
Sbjct: 489 STIDTTKAKLFDLYQSKFWGLKYAVGAAATILKVDQIIMAKRAG 532
>BT011330-1|AAR96122.1| 504|Drosophila melanogaster SD21550p
protein.
Length = 504
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 322 LRSACGSRPSSSLTP*VPPARPPLRFYQWMRPSRMSRAV 206
L +C S P + TP PP PP + ++PS + A+
Sbjct: 280 LNGSCPSLPMGNPTPPPPPPAPPASKVRRVQPSPQTTAI 318
>BT010018-1|AAQ22487.1| 605|Drosophila melanogaster RE15062p
protein.
Length = 605
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 322 LRSACGSRPSSSLTP*VPPARPPLRFYQWMRPSRMSRAV 206
L +C S P + TP PP PP + ++PS + A+
Sbjct: 381 LNGSCPSLPMGNPTPPPPPPAPPASKVRRVQPSPQTTAI 419
>AE013599-1291|AAM68734.1| 504|Drosophila melanogaster CG13204-PB,
isoform B protein.
Length = 504
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 322 LRSACGSRPSSSLTP*VPPARPPLRFYQWMRPSRMSRAV 206
L +C S P + TP PP PP + ++PS + A+
Sbjct: 280 LNGSCPSLPMGNPTPPPPPPAPPASKVRRVQPSPQTTAI 318
>AE013599-1290|AAF58652.1| 605|Drosophila melanogaster CG13204-PA,
isoform A protein.
Length = 605
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 322 LRSACGSRPSSSLTP*VPPARPPLRFYQWMRPSRMSRAV 206
L +C S P + TP PP PP + ++PS + A+
Sbjct: 381 LNGSCPSLPMGNPTPPPPPPAPPASKVRRVQPSPQTTAI 419
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,405,351
Number of Sequences: 53049
Number of extensions: 448932
Number of successful extensions: 1168
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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