Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS319C02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 105 2e-23
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 77 6e-15
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 77 8e-15
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 77 8e-15
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 58 4e-09
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 58 4e-09
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 55 3e-08
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 53 1e-07
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 52 2e-07
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 52 2e-07
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 44 5e-05
Z81534-1|CAB04346.1| 284|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 27 6.2
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 105 bits (252), Expect = 2e-23
Identities = 49/102 (48%), Positives = 64/102 (62%)
Frame = -1
Query: 518 HSLQLAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISG 339
HS + GK+Q IPRQL NAGLD +LNKLR +HA GE G+D+
Sbjct: 421 HSKGIEGKDQAFWMAYGQAFEIIPRQLCQNAGLDALDVLNKLRHRHAQGEKWAGIDIHRE 480
Query: 338 EVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIKNVK 213
V DN CVWEP++VK NA++AA EA +LS+D+T+KNV+
Sbjct: 481 AVGDNLVACVWEPSIVKRNAITAATEAACLVLSIDQTVKNVR 522
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 77.4 bits (182), Expect = 6e-15
Identities = 43/96 (44%), Positives = 54/96 (56%)
Frame = -1
Query: 509 QLAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVV 330
++AGKE L +P + DNAGLD L+ +LR +HA G H G+D+ GEV
Sbjct: 421 KVAGKESLAVEAFGRALAQLPTIICDNAGLDSAELVTRLRAEHANGRHNMGIDIEKGEVA 480
Query: 329 DNFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
D V E VKL VS+A EAT QIL VD+ IK
Sbjct: 481 DVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIK 516
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 77.0 bits (181), Expect = 8e-15
Identities = 43/96 (44%), Positives = 54/96 (56%)
Frame = -1
Query: 509 QLAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVV 330
++AGKE L +P + DNAGLD L+ +LR +HA G H G+D+ GEV
Sbjct: 421 KVAGKEALAVEAFGRALAQLPTIICDNAGLDSAELVTRLRAEHANGRHNMGIDIEKGEVA 480
Query: 329 DNFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
D V E VKL VS+A EAT QIL VD+ IK
Sbjct: 481 DVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIK 516
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 77.0 bits (181), Expect = 8e-15
Identities = 43/96 (44%), Positives = 54/96 (56%)
Frame = -1
Query: 509 QLAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVV 330
++AGKE L +P + DNAGLD L+ +LR +HA G H G+D+ GEV
Sbjct: 421 KVAGKEALAVEAFGRALAQLPTIICDNAGLDSAELVTRLRAEHANGRHNMGIDIEKGEVA 480
Query: 329 DNFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
D V E VKL VS+A EAT QIL VD+ IK
Sbjct: 481 DVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIK 516
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 58.0 bits (134), Expect = 4e-09
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = -1
Query: 452 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVS 273
IP LA+NAGL + +LR HA G ++GV+V G V D + V +P LV +A+
Sbjct: 461 IPYTLAENAGLSPIHTVTELRNNHANGNSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIK 520
Query: 272 AACEATAQILSVDETIKNVK 213
A E IL +D+ + V+
Sbjct: 521 QASECVRSILKIDDIVMAVR 540
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 58.0 bits (134), Expect = 4e-09
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = -1
Query: 452 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVS 273
IP LA+NAGL + +LR HA G ++GV+V G V D + V +P LV +A+
Sbjct: 461 IPYTLAENAGLSPIHTVTELRNNHANGNSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIK 520
Query: 272 AACEATAQILSVDETIKNVK 213
A E IL +D+ + V+
Sbjct: 521 QASECVRSILKIDDIVMAVR 540
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 55.2 bits (127), Expect = 3e-08
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Frame = -1
Query: 521 SHSLQLAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGE------HTH 360
+++ L+ +EQL IP+ LA NA D T L+ KLR H+ + H
Sbjct: 428 TYAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDLVTKLRAYHSKAQLIPQLQHLK 487
Query: 359 --GVDVISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
G+D+ G + DN + EPAL K+ ++ A EA IL +D+ IK
Sbjct: 488 WAGLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLIK 535
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 53.2 bits (122), Expect = 1e-07
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = -1
Query: 521 SHSLQLAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVIS 342
S + G EQ +P+ +A+NAG+ T L KL +H AG+ G+D+
Sbjct: 458 SFGAKAPGLEQYAIKKFAHALETLPKAIAENAGMPTTETLTKLYAEHVAGKKNAGIDIWK 517
Query: 341 GEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETI--KNVKGG 207
E +D +++ K A+ A +A + IL VD+ I K GG
Sbjct: 518 RETMDAVVNNIFDLYAGKRLAIKLATDAASTILKVDQIIMSKQATGG 564
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 52.0 bits (119), Expect = 2e-07
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Frame = -1
Query: 521 SHSLQLAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGE------HTH 360
+++ L+ +EQL IP+ LA NA D T L+ LR H+ + H
Sbjct: 428 TYAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDLVTFLRAYHSKAQLIPQLQHLK 487
Query: 359 --GVDVISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
G+D+ G + DN + EPAL K+ ++ A EA IL +D+ IK
Sbjct: 488 WAGLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLIK 535
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 52.0 bits (119), Expect = 2e-07
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = -1
Query: 452 IPRQLADNAGLDGTGLLNKLRQKHA--AGEHTHGVDVISGEVVDNFAKCVWEPALVKLNA 279
IPR L N G + +LR HA A T GVD SG++VD +W+P V++
Sbjct: 449 IPRTLIQNCGGSTIRKMTELRAIHAQNAENWTFGVDGTSGDLVDMNKLEIWDPLAVRIQV 508
Query: 278 VSAACEATAQILSVDETIKNVK---GGEEAQ 195
+ A E + +L +D+ + K GGE+ +
Sbjct: 509 LKTAIETSVMLLRIDDIVSGTKKAVGGEKQE 539
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 44.4 bits (100), Expect = 5e-05
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = -1
Query: 506 LAGKEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKL-RQKHAAG-EHTHGVDVISGEV 333
L G+ +L IP+ LA N G D L KL +K AAG + G+D+ +G
Sbjct: 433 LKGRAKLGAEAFAQALLVIPKTLAVNGGYDAQETLVKLIEEKTAAGPDIAVGLDLETGGA 492
Query: 332 VDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 222
V+ + +W+ VK N++S+A +L VDE ++
Sbjct: 493 VE--PQGIWDNVTVKKNSISSATVLACNLLLVDEVMR 527
>Z81534-1|CAB04346.1| 284|Caenorhabditis elegans Hypothetical
protein F37H8.1 protein.
Length = 284
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 389 QKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVK 288
+KH +H G D+ + DN K W A++K
Sbjct: 240 RKHTVSQH--GSDIPPHNITDNIMKAEWHAAMIK 271
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 404 GVRSRPGLHCLPADEGWPQRLGP 472
G R PG LP D G P +GP
Sbjct: 238 GARGEPGHRGLPGDNGMPGPMGP 260
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 274 VPPARPPLRFYQWMRPSRMSRAVKR 200
VPP R PL Y +PS S V R
Sbjct: 1085 VPPTRAPLTVYNQQKPSSSSMMVSR 1109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,417,200
Number of Sequences: 27780
Number of extensions: 198878
Number of successful extensions: 620
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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