Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS319B09f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 146 2e-36
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 130 2e-31
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 105 3e-24
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 101 9e-23
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 94 1e-20
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 45 6e-06
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 33 0.034
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 27 1.7
SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase |Schizos... 25 5.2
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 25 6.8
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 25 6.8
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 25 9.0
SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1||... 25 9.0
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 25 9.0
SPAC1952.16 |rga9||RhoGAp, GTPase activator towards Rho/Rac/Cdc4... 25 9.0
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 25 9.0
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 146 bits (353), Expect = 2e-36
Identities = 75/174 (43%), Positives = 100/174 (57%), Gaps = 1/174 (0%)
Frame = +1
Query: 1 NYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXKEAXXXXXXXXXXXXXXATA 180
N+P M +WKIAPA+A G T++LK AE TPL+ E
Sbjct: 171 NFPFLMCAWKIAPAVACGNTIILKTAELTPLSALCLTKFVPECGFPPGVINVLSGDGRRC 230
Query: 181 GGALTHHPDVDKIAFTGSTEVGRIILGAASAVNLKRVTLELGGKSPLIVFNDADVEKXXX 360
G A++ H D+DK+AFTGST VGR+++ AA++ NLK+VTLELGGKSP IVFNDAD++
Sbjct: 231 GNAISSHMDIDKVAFTGSTGVGRMVMRAAASSNLKKVTLELGGKSPNIVFNDADLDSAAV 290
Query: 361 XXXXXXXXXXXXXXXXGTRTYVQSGIYDKFVKKAAEIAEKRSVGNPF-EDVQQG 519
G+R YVQ +YD+F+K+ A+ VG+PF ED QG
Sbjct: 291 WTNYGIFYNSGQVCCAGSRVYVQEDVYDEFIKRMVAKAKTLKVGDPFAEDTFQG 344
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 130 bits (313), Expect = 2e-31
Identities = 69/170 (40%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
Frame = +1
Query: 1 NYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXKEAXXXXXXXXXXXXXXATA 180
NYP+ M WKIAPALAAG +++K AE TPL+ +EA A
Sbjct: 165 NYPLNMAGWKIAPALAAGNCIIIKSAETTPLSLLYFATLVEEAGFPKGVVNIISGLGTVA 224
Query: 181 GGALTHHPDVDKIAFTGSTEVGRIILGAASAVNLKRVTLELGGKSPLIVFNDADVEKXXX 360
G + HP +DKIAFTGST+VG +I+ +A NLK VTLE GGKSP +VF DAD+++
Sbjct: 225 GSYMAKHPGIDKIAFTGSTKVG-VIVQQLAASNLKAVTLECGGKSPFLVFEDADLDQAVK 283
Query: 361 XXXXXXXXXXXXXXXXGTRTYVQSGIYDKFVKK-AAEIAEKRSVGNPFED 507
+R YVQ +YDKF++ + + VG PF+D
Sbjct: 284 WAALGIMYNSGQICTSNSRIYVQDSVYDKFIELFKKHVIQDYIVGMPFDD 333
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 105 bits (253), Expect = 3e-24
Identities = 61/165 (36%), Positives = 83/165 (50%), Gaps = 1/165 (0%)
Frame = +1
Query: 1 NYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXKEAXXXXXXXXXXXXXXATA 180
N+P M++ K+ ALAAGCTVV++PA +TP T + A +
Sbjct: 170 NFPAAMITRKVGAALAAGCTVVIRPAAETPFTALALAKLAERAGVPAGVLNMVTANSPSE 229
Query: 181 GG-ALTHHPDVDKIAFTGSTEVGRIILGAASAVNLKRVTLELGGKSPLIVFNDADVEKXX 357
G LT +P + K++FTGST VG+ IL S+ LK+++LELGG +P IVF DAD+EK
Sbjct: 230 HGIELTTNPLIRKVSFTGSTNVGK-ILAKQSSSTLKKLSLELGGNAPFIVFEDADLEKAA 288
Query: 358 XXXXXXXXXXXXXXXXXGTRTYVQSGIYDKFVKKAAEIAEKRSVG 492
R YV S +YD FV E K +G
Sbjct: 289 DALMACKFRGSGQTCVCANRIYVHSSVYDAFVDLVTERVSKFKLG 333
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 101 bits (241), Expect = 9e-23
Identities = 59/169 (34%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Frame = +1
Query: 1 NYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXKEAXXXXXXXXXXXXXXATA 180
N+P M++ K ALAAGCT + PA +TP +EA A+A
Sbjct: 165 NFPAAMIARKGGAALAAGCTAIFLPAFRTPYVCLGLVRLAQEAGFPDGVLNVITSSDASA 224
Query: 181 GGA-LTHHPDVDKIAFTGSTEVGRIILGAASAVNLKRVTLELGGKSPLIVFNDADVEKXX 357
G LT +P V K++FTGST VG+I++G SA +K+V++ELGG +P IVF D +++
Sbjct: 225 HGKELTTNPIVRKVSFTGSTNVGKILMG-QSASTIKKVSMELGGNAPFIVFPDFPIDQAV 283
Query: 358 XXXXXXXXXXXXXXXXXGTRTYVQSGIYDKFVKKAAEIAEKRSVGNPFE 504
R YV +YD+FV K E + VG+ F+
Sbjct: 284 ESFCTIKFNSCGQVCVCPNRVYVHKNVYDEFVSKLTEKVKTIKVGDGFD 332
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 94.3 bits (224), Expect = 1e-20
Identities = 56/165 (33%), Positives = 78/165 (47%)
Frame = +1
Query: 1 NYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXKEAXXXXXXXXXXXXXXATA 180
N+P+ M WK+ PA+A+G VVLKP+E P + KEA +
Sbjct: 173 NFPLKMALWKLVPAIASGNCVVLKPSELAPWSCLEFALICKEAGLPDGVLNVIIGSGKES 232
Query: 181 GGALTHHPDVDKIAFTGSTEVGRIILGAASAVNLKRVTLELGGKSPLIVFNDADVEKXXX 360
G AL+ HP + +AFTGS G+ I+ AA A N+ +TLELGGKSPLI+ DAD+
Sbjct: 233 GAALSCHPKIAYLAFTGSLATGKKIMHAA-AENIVPLTLELGGKSPLIICEDADLSLAIP 291
Query: 361 XXXXXXXXXXXXXXXXGTRTYVQSGIYDKFVKKAAEIAEKRSVGN 495
+R V + D+ + A K +GN
Sbjct: 292 SAAFAIFFNQGEACTAASRLIVHESVADEVLGGLVSEANKLIIGN 336
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 45.2 bits (102), Expect = 6e-06
Identities = 37/156 (23%), Positives = 59/156 (37%), Gaps = 3/156 (1%)
Frame = +1
Query: 1 NYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXK---EAXXXXXXXXXXXXXX 171
NYP+ I AL AG +V+K +E T + + ++
Sbjct: 138 NYPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLLQSMGHSPELVQCITCL 197
Query: 172 ATAGGALTHHPDVDKIAFTGSTEVGRIILGAASAVNLKRVTLELGGKSPLIVFNDADVEK 351
LT H + I F GS + +++ A++A L + LELGGK P I+ +D +E+
Sbjct: 198 PDVADHLTSHSGIKHITFIGSQPIAKLV-AASAAKQLTPLCLELGGKDPCILTDDHRLEE 256
Query: 352 XXXXXXXXXXXXXXXXXXXGTRTYVQSGIYDKFVKK 459
R G+YD + K
Sbjct: 257 ILSIVMRGVFQSAGQNCIGIERIIALDGVYDTIITK 292
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 32.7 bits (71), Expect = 0.034
Identities = 35/166 (21%), Positives = 60/166 (36%), Gaps = 8/166 (4%)
Frame = +1
Query: 34 APALAAGCTVVLKPAEQTPLTXXXXXXXXKEAXXXXXXXXXXXXXXATAGGALTHHPDVD 213
A L G V++KP++ L+ +EA +HP+
Sbjct: 203 AAPLLMGNVVLMKPSDHAVLSSYIVYQIFREAGLPAGALQFIPGDAVEVSKVCFNHPEFA 262
Query: 214 KIAFTGSTEVGRIILG--AASAVNLK-----RVTLELGGKSPLIVFNDADVEKXXXXXXX 372
+ FTGST V R + G + N K ++ E GGK+ +V + A+++
Sbjct: 263 GLHFTGSTAVFRSLWGTIGENVANGKYRTYPKIVGETGGKNFHLVHSSAEIKSAVVNAVR 322
Query: 373 XXXXXXXXXXXXGTRTYVQSGIYDK-FVKKAAEIAEKRSVGNPFED 507
+R YV ++ F + + + VG P D
Sbjct: 323 AAFEYQGQKCSALSRLYVSKYAWENGFRDELTKQVKSLKVGAPLTD 368
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 395 SVAAPEPERTSNPVSMTSLSRKLPRSQKRDPSEIPSRTFN 514
+ + P P + NP+S TS+S ++P K + +P N
Sbjct: 186 NTSKPNPIVSENPISATSVSIEIPIKPKELSNNLPFPRLN 225
>SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 25.4 bits (53), Expect = 5.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 460 AAEIAEKRSVGNPFEDVQQG 519
A E+A++R++ PFED Q G
Sbjct: 267 AYEVAKRRNIIIPFEDAQTG 286
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 418 FWFRRSNTDRRLRKPLRERFVLLFQR 341
FW RR +DRR K + E V+L Q+
Sbjct: 702 FWSRRMASDRRSYKQVVETTVVLAQQ 727
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -1
Query: 278 LTAEAAPKMILPTSVEPVKAI 216
L+AE K++ PT+V+P +AI
Sbjct: 31 LSAETISKLMAPTTVDPQQAI 51
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +2
Query: 338 LTLKKQHKSLTQRLSQTPVSVAAPEPERTSNPVSMTSLSRKLPRSQKRDPSEI 496
L L + + ++Q L + A +PE + V + +L+ +LP K E+
Sbjct: 180 LQLYSKKRKVSQPLESHASAFAVIQPEGVDHEVQVLALASRLPTGSKLSIVEV 232
>SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +2
Query: 347 KKQHKSLTQRLSQTPVSVAAPEPERTSNPVSMTSLSRKLPRSQKRDPSEIPSRTFN 514
++ H+S + S P S+A P P S + + +P + ++ S+T N
Sbjct: 451 REMHRSQVIQTSGRPKSMAPPSPSPISPSFPLHEIQSPMPNRRMAASADDISQTSN 506
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 435 TGLDVRSGSGAATLTGV 385
TG D R G GA +TG+
Sbjct: 102 TGADTRDGDGAGVMTGM 118
>SPAC1952.16 |rga9||RhoGAp, GTPase activator towards
Rho/Rac/Cdc42-like small GTPases|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 684
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 410 EPERTSNPVSMTSLSRKLPRSQKRDPSEIPSRTF 511
E ER P++ + KLPRS + P+R F
Sbjct: 648 EIERALTPITTSPQKLKLPRSSSPCKNPSPTRRF 681
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -3
Query: 396 LTGVCESRCVSDLCCFFNVSIIENYQRTFAAEFQSYTFQI 277
+TG S C+S + FF+ II A ++ +F I
Sbjct: 118 MTGYITSLCLSAILKFFSFRIISEESPNLALSMRNLSFAI 157
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.132 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,943,889
Number of Sequences: 5004
Number of extensions: 34222
Number of successful extensions: 97
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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