Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS319B07f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 209 1e-54
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 209 1e-54
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 108 3e-24
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 108 3e-24
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 108 3e-24
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 103 1e-22
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 103 1e-22
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 88 4e-18
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 88 4e-18
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 81 5e-16
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 81 5e-16
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 81 5e-16
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 76 2e-14
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 76 2e-14
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 74 7e-14
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 64 4e-11
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 31 0.38
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 31 0.38
Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z49913-5|CAA90146.1| 404|Caenorhabditis elegans Hypothetical pr... 27 8.1
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 209 bits (510), Expect = 1e-54
Identities = 103/169 (60%), Positives = 127/169 (75%)
Frame = +3
Query: 15 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 194
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 195 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 374
NVLLHEM IQHPTAS+IA+ VLLIGELLKQA+ + EGLHPRI+T
Sbjct: 61 NVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVT 120
Query: 375 EGFDIARNKSLEVLESMKIPIEIARENLVDVARTSLKTKVHPSLADVLT 521
EGF+ A K+LE+LE K + R+ LV+V RT+L+TK+H LAD +T
Sbjct: 121 EGFEWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHIT 169
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 209 bits (510), Expect = 1e-54
Identities = 103/169 (60%), Positives = 127/169 (75%)
Frame = +3
Query: 15 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 194
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 195 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 374
NVLLHEM IQHPTAS+IA+ VLLIGELLKQA+ + EGLHPRI+T
Sbjct: 61 NVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVT 120
Query: 375 EGFDIARNKSLEVLESMKIPIEIARENLVDVARTSLKTKVHPSLADVLT 521
EGF+ A K+LE+LE K + R+ LV+V RT+L+TK+H LAD +T
Sbjct: 121 EGFEWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHIT 169
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 108 bits (259), Expect = 3e-24
Identities = 57/145 (39%), Positives = 88/145 (60%), Gaps = 2/145 (1%)
Frame = +3
Query: 66 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 245
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 246 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM 425
V+L G LL++A+ I G+HP I +GFD+A K+LE L+S+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 426 --KIPIEIARENLVDVARTSLKTKV 494
K P+E RE LV+ A+TSL +K+
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKI 176
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 108 bits (259), Expect = 3e-24
Identities = 57/145 (39%), Positives = 88/145 (60%), Gaps = 2/145 (1%)
Frame = +3
Query: 66 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 245
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 246 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM 425
V+L G LL++A+ I G+HP I +GFD+A K+LE L+S+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 426 --KIPIEIARENLVDVARTSLKTKV 494
K P+E RE LV+ A+TSL +K+
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKI 176
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 108 bits (259), Expect = 3e-24
Identities = 57/145 (39%), Positives = 88/145 (60%), Gaps = 2/145 (1%)
Frame = +3
Query: 66 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 245
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 246 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM 425
V+L G LL++A+ I G+HP I +GFD+A K+LE L+S+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 426 --KIPIEIARENLVDVARTSLKTKV 494
K P+E RE LV+ A+TSL +K+
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKI 176
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 103 bits (246), Expect = 1e-22
Identities = 50/139 (35%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Frame = +3
Query: 81 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 260
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M + HPTA ++
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 261 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 440
V++ G LL A +S+G+HP I+E F A ++ ++L+ M P++
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVD 155
Query: 441 IARENLVD-VARTSLKTKV 494
++ + L++ +A TSL +KV
Sbjct: 156 LSNDALLNKMATTSLNSKV 174
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 103 bits (246), Expect = 1e-22
Identities = 50/139 (35%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Frame = +3
Query: 81 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 260
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M + HPTA ++
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 261 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 440
V++ G LL A +S+G+HP I+E F A ++ ++L+ M P++
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVD 155
Query: 441 IARENLVD-VARTSLKTKV 494
++ + L++ +A TSL +KV
Sbjct: 156 LSNDALLNKMATTSLNSKV 174
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 87.8 bits (208), Expect = 4e-18
Identities = 41/140 (29%), Positives = 82/140 (58%), Gaps = 2/140 (1%)
Frame = +3
Query: 81 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 260
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++++HP ++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQ 84
Query: 261 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLE-VLESMKIPI 437
V++ ELLK+AD + + +HP I G+ +A ++++ + E++
Sbjct: 85 LQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTS 144
Query: 438 E-IARENLVDVARTSLKTKV 494
+ I R+++V+ A+TS+ +K+
Sbjct: 145 DSIGRQSVVNAAKTSMSSKI 164
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 87.8 bits (208), Expect = 4e-18
Identities = 41/140 (29%), Positives = 82/140 (58%), Gaps = 2/140 (1%)
Frame = +3
Query: 81 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 260
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++++HP ++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQ 84
Query: 261 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLE-VLESMKIPI 437
V++ ELLK+AD + + +HP I G+ +A ++++ + E++
Sbjct: 85 LQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTS 144
Query: 438 E-IARENLVDVARTSLKTKV 494
+ I R+++V+ A+TS+ +K+
Sbjct: 145 DSIGRQSVVNAAKTSMSSKI 164
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 81.0 bits (191), Expect = 5e-16
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Frame = +3
Query: 15 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 182
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 183 TKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHP 362
T DG +L + + +P A ++ +L ELLK+A+ +++ +HP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 363 RIITEGFDIARNKSLEVLESMKIPI-EIARENLVDVARTSLKTKV 494
+ I G+ A + E L+ I + R++L+ +ART+L +K+
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKI 165
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 81.0 bits (191), Expect = 5e-16
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Frame = +3
Query: 15 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 182
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 183 TKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHP 362
T DG +L + + +P A ++ +L ELLK+A+ +++ +HP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 363 RIITEGFDIARNKSLEVLESMKIPI-EIARENLVDVARTSLKTKV 494
+ I G+ A + E L+ I + R++L+ +ART+L +K+
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKI 165
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 81.0 bits (191), Expect = 5e-16
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Frame = +3
Query: 15 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 182
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 183 TKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHP 362
T DG +L + + +P A ++ +L ELLK+A+ +++ +HP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 363 RIITEGFDIARNKSLEVLESMKIPI-EIARENLVDVARTSLKTKV 494
+ I G+ A + E L+ I + R++L+ +ART+L +K+
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKI 165
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 75.8 bits (178), Expect = 2e-14
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Frame = +3
Query: 24 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 203
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 204 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF 383
L + I P AS + V+L E+LKQ FI +G+HP+++
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 384 DIARNKSLEVLESMKIPIE---IARENLVDVARTSLKTKV 494
A K+L+ L ++I I RE LV A T+L +K+
Sbjct: 126 GKACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKL 165
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 75.8 bits (178), Expect = 2e-14
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Frame = +3
Query: 24 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 203
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 204 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF 383
L + I P AS + V+L E+LKQ FI +G+HP+++
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 384 DIARNKSLEVLESMKIPIE---IARENLVDVARTSLKTKV 494
A K+L+ L ++I I RE LV A T+L +K+
Sbjct: 126 GKACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKL 165
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 73.7 bits (173), Expect = 7e-14
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Frame = +3
Query: 81 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 260
NI+A K I DV++T+LGP+ +KML+ G I +T DGN +L E+ ++HP A +
Sbjct: 28 NINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHPAAKSMIEIAR 87
Query: 261 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLES-MKIPI 437
++L GE++ A ++ + HP +I + + A ++ E+ +
Sbjct: 88 TQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMIQWSENKFSKTV 147
Query: 438 EIARE-NLVDVARTSLKTKV 494
+I + + V ++ L TK+
Sbjct: 148 DITDDAEIAKVVKSCLGTKM 167
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 64.5 bits (150), Expect = 4e-11
Identities = 36/139 (25%), Positives = 66/139 (47%)
Frame = +3
Query: 51 FARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHP 230
F +A+ NI A + +++ GP G KM+++ + +T D +L E++IQHP
Sbjct: 21 FKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHP 80
Query: 231 TASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLE 410
A +I V+L LL+ A I G+ P+ + G++ A K+LE
Sbjct: 81 AARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALE 140
Query: 411 VLESMKIPIEIARENLVDV 467
+L ++ + +N+ +V
Sbjct: 141 ILPTLVVKEATDMKNIEEV 159
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 31.5 bits (68), Expect = 0.38
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +3
Query: 54 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT 233
A QA+ V ++ + D + +GPKG ++ G KITKDG + + ++
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKY 81
Query: 234 ASLIAR 251
+L A+
Sbjct: 82 QNLGAK 87
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 31.5 bits (68), Expect = 0.38
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +3
Query: 54 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT 233
A QA+ V ++ + D + +GPKG ++ G KITKDG + + ++
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKY 81
Query: 234 ASLIAR 251
+L A+
Sbjct: 82 QNLGAK 87
>Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical
protein R166.5b protein.
Length = 707
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -2
Query: 454 FSRAISIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRR 302
F R S+GI I+ S + +S+ S PS++N+S L+ SP++R
Sbjct: 575 FPRKKSVGIAIEKSRSGEFTPPISRASPTTP--PPSMLNLSEDLTDSPVKR 623
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -2
Query: 454 FSRAISIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRR 302
F R S+GI I+ S + +S+ S PS++N+S L+ SP++R
Sbjct: 573 FPRKKSVGIAIEKSRSGEFTPPISRASPTTP--PPSMLNLSEDLTDSPVKR 621
>Z49913-5|CAA90146.1| 404|Caenorhabditis elegans Hypothetical
protein ZK938.7 protein.
Length = 404
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 241 SEAVGCWICISCNKTLPSLVIFMSPAPETNIFIVPFGPRLV 119
+E V CW CN+ L + + + P T+ ++P R V
Sbjct: 61 TEVVRCWDSFKCNQKLEFVRLKNTITPTTSSILIPCTRRTV 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,240,861
Number of Sequences: 27780
Number of extensions: 208865
Number of successful extensions: 490
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -