Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS319B01f
(467 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_1218 - 11633829-11634628,11634713-11635050,11635349-116354... 31 0.35
02_01_0387 - 2804990-2805059,2805106-2806086,2806856-2806875 29 2.5
10_08_1057 + 22594419-22594466,22594710-22594776,22595053-225952... 28 4.3
10_08_1022 + 22337332-22339398 27 5.7
08_02_1247 + 25578291-25578305,25579084-25579197,25579497-255796... 27 5.7
05_07_0267 + 28818396-28818513,28819292-28819697,28819796-288199... 27 5.7
04_04_0794 + 28104725-28104829,28105721-28105762,28106470-281065... 27 5.7
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 27 5.7
07_01_0535 + 3952066-3952986 27 7.5
05_07_0106 + 27723877-27723978,27724825-27725100,27726103-27727281 27 7.5
01_01_0764 + 5910687-5910961,5912549-5912636,5912750-5912909,591... 27 7.5
10_01_0326 + 3574129-3574329,3575144-3575692,3575914-3576072,357... 27 10.0
07_03_1782 + 29477748-29478169,29478257-29478413,29478518-294786... 27 10.0
07_03_1498 + 26995209-26995752,26995945-26996513 27 10.0
06_03_1231 + 28580006-28580934,28581810-28582086 27 10.0
06_02_0013 - 10581449-10585105 27 10.0
03_04_0151 - 17729023-17729372,17729441-17730623,17730723-177309... 27 10.0
02_01_0564 - 4136114-4136566,4136977-4137047,4137197-4137275,413... 27 10.0
>07_01_1218 -
11633829-11634628,11634713-11635050,11635349-11635445,
11635482-11635725,11636114-11636122
Length = 495
Score = 31.5 bits (68), Expect = 0.35
Identities = 25/84 (29%), Positives = 35/84 (41%)
Frame = -1
Query: 407 NKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTIQENYPNDQQV 228
N E+ P +F D +I Y P+HQY I + Y N Y TI + Q
Sbjct: 167 NIEEVILPLEFGDSDLNIIKIMGKYFPQHQY-FIPEYEYPGKDQNYYETILCETRSAQIF 225
Query: 227 QYTTEQQHYSSKPHEEYPSKRYDY 156
+ YS+ Y +KRY+Y
Sbjct: 226 HTRNARTIYST----SYANKRYNY 245
>02_01_0387 - 2804990-2805059,2805106-2806086,2806856-2806875
Length = 356
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -1
Query: 242 NDQQVQYTTEQQHYSSKPHEEYPSKRYDYPTAQ 144
N ++Q T+Q+H +S+P E P++R D+ Q
Sbjct: 170 NFHELQKHTQQKHPNSRPSEIDPARRVDWENFQ 202
>10_08_1057 +
22594419-22594466,22594710-22594776,22595053-22595270,
22595425-22595981,22596398-22597217
Length = 569
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 296 KFVLLWCTDVPEGSAQVSLWYNH--LLKRNHLVLFVFLCLHMVWYL 427
+FV+L C+DV G AQ+ +Y+ + R+ F FL L + +Y+
Sbjct: 459 QFVILACSDVFCGIAQLEFFYSEAPVSMRSLCSAFSFLALSLGYYV 504
>10_08_1022 + 22337332-22339398
Length = 688
Score = 27.5 bits (58), Expect = 5.7
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -1
Query: 383 DDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTIQENYPNDQQVQYTTEQQH 204
D S+ D ++ P P HQ + S ST+ N P++ P+ +QQ
Sbjct: 273 DSISAADISVSKPPPP--PPHQIQHFENGSTSTLTENPSPSVHAPTPSQPAAPPQRQQQQ 330
Query: 203 YSSKPHEEYPSKR 165
S ++ P +R
Sbjct: 331 QQSSQAQQGPFRR 343
>08_02_1247 +
25578291-25578305,25579084-25579197,25579497-25579628,
25579726-25579854,25580024-25580421,25580503-25580602,
25580734-25580793,25580881-25580967,25581058-25581186,
25581260-25581559
Length = 487
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 359 YTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTIQENYPNDQQV 228
Y+ +PEH LPEH T + S T+ ++ + E +++V
Sbjct: 17 YSLNLPEH-LPEHHVITSAEQSEKTISKSIADLVWEIAALEEEV 59
>05_07_0267 +
28818396-28818513,28819292-28819697,28819796-28819973,
28820414-28820553,28820629-28821874,28821952-28822052,
28822170-28822314,28822755-28822823,28822910-28822955,
28823049-28823422,28823622-28823701,28823813-28823948,
28824199-28824358,28824582-28824664,28825417-28825545
Length = 1136
Score = 27.5 bits (58), Expect = 5.7
Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Frame = -1
Query: 380 DFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNL-YPTIQENY---PNDQQVQYTTE 213
D SS+ PEH E+ +T K V+H P+ + P Q Y+T
Sbjct: 420 DISSQQKSQALAPEHL--ENMWTKGKNYKSENVKHVARVPSKSSSLGTSPVQQSAPYSTS 477
Query: 212 QQHYSSKPHEEYPSKRYD 159
HY S P + R D
Sbjct: 478 VGHYPSAPQRQTTMSRSD 495
>04_04_0794 +
28104725-28104829,28105721-28105762,28106470-28106544,
28106811-28106950,28107036-28107093,28107239-28107241,
28107740-28107849,28108562-28108648,28108773-28108856,
28109212-28109277,28109377-28109488,28109949-28110149
Length = 360
Score = 27.5 bits (58), Expect = 5.7
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 408 CTWCGTCFTNNNIIPFW 458
C W GTC N FW
Sbjct: 162 CVWLGTCIAKRNYCRFW 178
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = -1
Query: 281 QHNLYPTIQENYPNDQQVQYTTEQQHYSSKPHEEYPSKRYDY 156
QHN + Q + P+ QQ QQH+ H+++ ++ +
Sbjct: 31 QHNHHQQQQTSAPHHQQYVQRQPQQHHHHNHHQQHQQQQQQW 72
>07_01_0535 + 3952066-3952986
Length = 306
Score = 27.1 bits (57), Expect = 7.5
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = -1
Query: 419 TPCA-NKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYPT----IQ 255
T C NK ++ +P S +T + Y +H + ++Q L+ +Q
Sbjct: 3 TECGVNKSRRFDPG-MSRRTRRSTSLIVCYQDQHAPSLVQQLRQDDKLKTLFQRQGMELQ 61
Query: 254 ENYP-NDQQVQYTTEQQHYSSKPHEEYPSKRYDY 156
YP DQ++Q ++Q ++ H+E K + Y
Sbjct: 62 PPYPYEDQELQSEGDEQETPNRYHDEQEEKPHHY 95
>05_07_0106 + 27723877-27723978,27724825-27725100,27726103-27727281
Length = 518
Score = 27.1 bits (57), Expect = 7.5
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Frame = -1
Query: 404 KEKQKEPDDFSSEDDYTTEIPEHYL-PEHQYT-TIKQTSYSTVQHNLYPTIQENYPNDQQ 231
+ Q P T++ P+ Y+ P+ Q+ Q + Q Q++Y N QQ
Sbjct: 259 RHTQNTPQTVVEAQQVTSQAPDFYIQPQQQWAHQTGQQVHQARQPQPQVVQQQHYNNIQQ 318
Query: 230 VQYTTEQQHYSSKPHEEYPSKRYDYP 153
V Q SS + P YP
Sbjct: 319 VPAQIVQMQTSSPQAQSAPHVTLLYP 344
>01_01_0764 +
5910687-5910961,5912549-5912636,5912750-5912909,
5913017-5913237,5913315-5913610,5914176-5914287,
5914376-5914514,5914850-5915046,5915134-5915223,
5915611-5915646
Length = 537
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Frame = -3
Query: 183 RISFKTV*LSHSTTSSIVSV-----DIYCYWAFTVFVFQCLKF 70
R SF+ V LS TS + V D YCY +T VF LK+
Sbjct: 230 RGSFRRVFLSGFLTSMFLLVLSVIADYYCYGKWTASVFNLLKY 272
>10_01_0326 +
3574129-3574329,3575144-3575692,3575914-3576072,
3576349-3577543,3577626-3577762,3578052-3578242,
3578888-3579218
Length = 920
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 245 PNDQQVQYTTEQQH--YSSKPHEEYPSKRYDYPTAQP 141
PN+QQ Q+ ++QH +P + +P + QP
Sbjct: 445 PNEQQQQHRLDEQHQRQDHQPKQNHPHDELQHQKQQP 481
>07_03_1782 +
29477748-29478169,29478257-29478413,29478518-29478610,
29478753-29478938,29479107-29479187,29479788-29479925,
29480044-29480208
Length = 413
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 214 SNNTILQSLMKNILQNGMIIPQH 146
SNN+ L S+M +IL + +++P H
Sbjct: 147 SNNSRLNSVMGHILHSSILVPYH 169
>07_03_1498 + 26995209-26995752,26995945-26996513
Length = 370
Score = 26.6 bits (56), Expect = 10.0
Identities = 19/84 (22%), Positives = 29/84 (34%)
Frame = -1
Query: 428 TGTTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTIQEN 249
T TTP + S D+ ++ EH +T + T H+ T N
Sbjct: 277 TWTTPMEPNSFGYDSIKVHSFSDFDSDSDSIEFEEHSFTVLTGTDVVPCVHDGNGTGNGN 336
Query: 248 YPNDQQVQYTTEQQHYSSKPHEEY 177
Y N + ++SK H Y
Sbjct: 337 YANGSNGKVELRMIKHNSKSHISY 360
>06_03_1231 + 28580006-28580934,28581810-28582086
Length = 401
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 242 NDQQVQYTTEQQHYSSKPHEEYPSKRYDYPTAQ 144
N ++Q T+Q+H S+P E P+++ D+ Q
Sbjct: 146 NFNELQKHTQQKHPDSRPSEIDPARQVDWENFQ 178
>06_02_0013 - 10581449-10585105
Length = 1218
Score = 26.6 bits (56), Expect = 10.0
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = -1
Query: 404 KEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTIQENYPNDQQVQ 225
KE DDF + D ++ HQ T +K+ ST+ ++L T E D
Sbjct: 548 KENSSSIDDFKTLKDGISDPEPQSADSHQVTDMKE--QSTMTNDLKTTDTEGSMPDPD-N 604
Query: 224 YTTEQQHYSSK 192
+T+ QH +K
Sbjct: 605 RSTDSQHVINK 615
>03_04_0151 -
17729023-17729372,17729441-17730623,17730723-17730953,
17730975-17731036,17732085-17732157,17737044-17737834,
17737932-17738004
Length = 920
Score = 26.6 bits (56), Expect = 10.0
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Frame = -1
Query: 467 KPXPK---WNDIIISETGTTPCANKEKQKEPDDFSSEDDYTTE---IPEHYLPEHQYTTI 306
KP PK W ++ S+ P NK+K K+PD S+ ++ + + L +
Sbjct: 573 KPQPKRRTWQNL--SKQSAIPIVNKKKAKKPDIGPSDVKKPSKGKMLLKQTLQKGILIAT 630
Query: 305 KQTSYSTVQHNLYPTIQENYPNDQQVQYTTEQ 210
STVQ N P ++ + N + + T Q
Sbjct: 631 SSCKSSTVQANTGPVPRKKHANAIRSNHGTGQ 662
>02_01_0564 -
4136114-4136566,4136977-4137047,4137197-4137275,
4137380-4137535,4137867-4137938,4138081-4138161,
4138237-4138302,4138482-4138547,4138648-4138698,
4138982-4139109,4139239-4139377,4139606-4139643,
4139679-4139748,4140194-4140277
Length = 517
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = -1
Query: 341 EHYLPEHQYTTIKQTSYSTVQHNLYPTIQENYPNDQQVQYTTEQQHYSSKP 189
++Y +HQ + + QH+ Q +Y +Q Q +QQH P
Sbjct: 435 QYYQSQHQQQYYQPHHFQDHQHHHNMYFQTHYQQNQIYQQQQQQQHQYPAP 485
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,855,302
Number of Sequences: 37544
Number of extensions: 191474
Number of successful extensions: 561
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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