Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS319B01f
(467 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46116-1|AAC50439.1| 1445|Homo sapiens receptor tyrosine phospha... 34 0.28
L09247-1|AAA60224.1| 1445|Homo sapiens receptor-type protein tyr... 34 0.28
AB209871-1|BAD93108.1| 1530|Homo sapiens protein tyrosine phosph... 34 0.28
DQ336121-1|ABC61872.1| 72|Homo sapiens SPANX-N1 locus variant ... 33 0.65
DQ336120-1|ABC61871.1| 72|Homo sapiens SPANX-N1 locus variant ... 33 0.65
DQ336119-1|ABC61870.1| 72|Homo sapiens SPANX-N1 locus variant ... 33 0.65
DQ336118-1|ABC61869.1| 72|Homo sapiens SPANX-N1 locus variant ... 33 0.65
AY825029-1|AAV97585.1| 72|Homo sapiens SPANX-N1 protein. 33 0.65
AL713923-1|CAH70536.1| 72|Homo sapiens novel protein similar t... 33 0.65
AL356499-1|CAI42585.1| 72|Homo sapiens novel protein similar t... 33 0.65
D87930-1|BAA22378.1| 1030|Homo sapiens myosin phosphatase target... 30 4.6
BC111752-1|AAI11753.1| 1030|Homo sapiens PPP1R12A protein protein. 30 4.6
AF458589-1|AAM49717.1| 995|Homo sapiens myosin phosphatase targ... 30 4.6
AF230662-1|AAF79937.1| 492|Homo sapiens unknown protein. 30 4.6
X78520-2|CAA55281.1| 762|Homo sapiens chloride channel 3 protein. 29 6.1
X78520-1|CAA55280.1| 820|Homo sapiens chloride channel 3 protein. 29 6.1
BC096223-1|AAH96223.1| 418|Homo sapiens synovial sarcoma transl... 29 6.1
BC096222-1|AAH96222.1| 418|Homo sapiens synovial sarcoma transl... 29 6.1
BC054877-1|AAH54877.1| 191|Homo sapiens CLCN3 protein protein. 29 6.1
AF343880-1|AAK21314.1| 422|Homo sapiens SYT variant 1 protein. 29 6.1
AF257500-1|AAG31034.1| 492|Homo sapiens SYT/SSX4 fusion protein... 29 6.1
AF244972-1|AAM00188.1| 414|Homo sapiens SYT protein protein. 29 6.1
AF172729-1|AAD51034.1| 818|Homo sapiens chloride channel 3 prot... 29 6.1
AF029346-1|AAB95161.1| 818|Homo sapiens chloride channel protei... 29 6.1
AB300356-1|BAF56183.1| 488|Homo sapiens fusion protein SYT-SSX2... 29 6.1
AB300354-1|BAF56181.1| 488|Homo sapiens fusion protein SYT-SSX1... 29 6.1
AB019542-1|BAC54560.1| 810|Homo sapiens clcn3e protein. 29 6.1
X79201-1|CAA55792.1| 391|Homo sapiens SYT protein. 29 8.0
U59464-1|AAC50550.1| 1447|Homo sapiens PATCHED protein. 29 8.0
U43148-1|AAC50496.1| 1296|Homo sapiens PTC protein. 29 8.0
CR542103-1|CAG46900.1| 391|Homo sapiens SS18 protein. 29 8.0
CR542088-1|CAG46885.1| 391|Homo sapiens SS18 protein. 29 8.0
BC096224-1|AAH96224.1| 387|Homo sapiens synovial sarcoma transl... 29 8.0
BC096221-1|AAH96221.1| 387|Homo sapiens synovial sarcoma transl... 29 8.0
AY395768-1|AAR21239.1| 651|Homo sapiens patched protein. 29 8.0
AL161729-2|CAH73818.1| 1296|Homo sapiens patched homolog 1 (Dros... 29 8.0
AL161729-1|CAH73817.1| 1447|Homo sapiens patched homolog 1 (Dros... 29 8.0
AB300357-1|BAF56184.1| 457|Homo sapiens fusion protein SYT-SSX2... 29 8.0
AB300355-1|BAF56182.1| 457|Homo sapiens fusion protein SYT-SSX1... 29 8.0
AB233422-1|BAE45302.1| 348|Homo sapiens PTCH protein -10 protein. 29 8.0
AB209495-1|BAD92732.1| 586|Homo sapiens patched variant protein. 29 8.0
>U46116-1|AAC50439.1| 1445|Homo sapiens receptor tyrosine
phosphatase gamma protein.
Length = 1445
Score = 33.9 bits (74), Expect = 0.28
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = -1
Query: 431 ETGTTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEH-QYTTIKQTSYSTVQHNLYPTIQ 255
++G T A + Q EP S + T E +P H Q T T + + + P +
Sbjct: 608 KSGVTHAAEERNQTEPSPTPSSPNRTAEGGHQTIPGHEQDHTAVPTDQTGGRRDAGPGLD 667
Query: 254 ENYPNDQQVQYT-TEQQHYSSKP-HEEYPSKR 165
+ QV T TE+Q+ S P E PSK+
Sbjct: 668 PDMVTSTQVPPTATEEQYAGSDPKRPEMPSKK 699
>L09247-1|AAA60224.1| 1445|Homo sapiens receptor-type protein
tyrosine phosphatase gamma protein.
Length = 1445
Score = 33.9 bits (74), Expect = 0.28
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = -1
Query: 431 ETGTTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEH-QYTTIKQTSYSTVQHNLYPTIQ 255
++G T A + Q EP S + T E +P H Q T T + + + P +
Sbjct: 608 KSGVTHAAEERNQTEPSPTPSSPNRTAEGGHQTIPGHEQDHTAVPTDQTGGRRDAGPGLD 667
Query: 254 ENYPNDQQVQYT-TEQQHYSSKP-HEEYPSKR 165
+ QV T TE+Q+ S P E PSK+
Sbjct: 668 PDMVTSTQVPPTATEEQYAGSDPKRPEMPSKK 699
>AB209871-1|BAD93108.1| 1530|Homo sapiens protein tyrosine
phosphatase, receptor type, G precursor variant protein.
Length = 1530
Score = 33.9 bits (74), Expect = 0.28
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = -1
Query: 431 ETGTTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEH-QYTTIKQTSYSTVQHNLYPTIQ 255
++G T A + Q EP S + T E +P H Q T T + + + P +
Sbjct: 693 KSGVTHAAEERNQTEPSPTPSSPNRTAEGGHQTIPGHEQDHTAVPTDQTGGRRDAGPGLD 752
Query: 254 ENYPNDQQVQYT-TEQQHYSSKP-HEEYPSKR 165
+ QV T TE+Q+ S P E PSK+
Sbjct: 753 PDMVTSTQVPPTATEEQYAGSDPKRPEMPSKK 784
>DQ336121-1|ABC61872.1| 72|Homo sapiens SPANX-N1 locus variant 4
protein.
Length = 72
Score = 32.7 bits (71), Expect = 0.65
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 419 TPCANKEKQKEPDDFSSEDDYTTEIPEHYL-PEHQYTTIKQTSYSTVQHNLYPTIQENYP 243
T N EK+K P + ++E+D E P L PE +K + YSTV Y ++ +
Sbjct: 5 TSSINGEKRKSPCESNNENDEMQETPNRDLAPEPSLKKMKTSEYSTVLAFCYRKAKKIHS 64
Query: 242 N 240
N
Sbjct: 65 N 65
>DQ336120-1|ABC61871.1| 72|Homo sapiens SPANX-N1 locus variant 3
protein.
Length = 72
Score = 32.7 bits (71), Expect = 0.65
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 419 TPCANKEKQKEPDDFSSEDDYTTEIPEHYL-PEHQYTTIKQTSYSTVQHNLYPTIQENYP 243
T N EK+K P + ++E+D E P L PE +K + YSTV Y ++ +
Sbjct: 5 TSSINGEKRKSPCESNNENDEMQETPNRDLAPEPSLKKMKTSEYSTVLAFCYRKAKKIHS 64
Query: 242 N 240
N
Sbjct: 65 N 65
>DQ336119-1|ABC61870.1| 72|Homo sapiens SPANX-N1 locus variant 2
protein.
Length = 72
Score = 32.7 bits (71), Expect = 0.65
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 419 TPCANKEKQKEPDDFSSEDDYTTEIPEHYL-PEHQYTTIKQTSYSTVQHNLYPTIQENYP 243
T N EK+K P + ++E+D E P L PE +K + YSTV Y ++ +
Sbjct: 5 TSSINGEKRKSPCESNNENDEMQETPNRDLAPEPSLKKMKTSEYSTVLAFCYRKAKKIHS 64
Query: 242 N 240
N
Sbjct: 65 N 65
>DQ336118-1|ABC61869.1| 72|Homo sapiens SPANX-N1 locus variant 1
protein.
Length = 72
Score = 32.7 bits (71), Expect = 0.65
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 419 TPCANKEKQKEPDDFSSEDDYTTEIPEHYL-PEHQYTTIKQTSYSTVQHNLYPTIQENYP 243
T N EK+K P + ++E+D E P L PE +K + YSTV Y ++ +
Sbjct: 5 TSSINGEKRKSPCESNNENDEMQETPNRDLAPEPSLKKMKTSEYSTVLAFCYRKAKKIHS 64
Query: 242 N 240
N
Sbjct: 65 N 65
>AY825029-1|AAV97585.1| 72|Homo sapiens SPANX-N1 protein.
Length = 72
Score = 32.7 bits (71), Expect = 0.65
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 419 TPCANKEKQKEPDDFSSEDDYTTEIPEHYL-PEHQYTTIKQTSYSTVQHNLYPTIQENYP 243
T N EK+K P + ++E+D E P L PE +K + YSTV Y ++ +
Sbjct: 5 TSSINGEKRKSPCESNNENDEMQETPNRDLAPEPSLKKMKTSEYSTVLAFCYRKAKKIHS 64
Query: 242 N 240
N
Sbjct: 65 N 65
>AL713923-1|CAH70536.1| 72|Homo sapiens novel protein similar to
Gorilla gorilla SPANX N member 1 protein.
Length = 72
Score = 32.7 bits (71), Expect = 0.65
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 419 TPCANKEKQKEPDDFSSEDDYTTEIPEHYL-PEHQYTTIKQTSYSTVQHNLYPTIQENYP 243
T N EK+K P + ++E+D E P L PE +K + YSTV Y ++ +
Sbjct: 5 TSSINGEKRKSPCESNNENDEMQETPNRDLAPEPSLKKMKTSEYSTVLAFCYRKAKKIHS 64
Query: 242 N 240
N
Sbjct: 65 N 65
>AL356499-1|CAI42585.1| 72|Homo sapiens novel protein similar to
Gorilla gorilla SPANX N member 1 protein.
Length = 72
Score = 32.7 bits (71), Expect = 0.65
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 419 TPCANKEKQKEPDDFSSEDDYTTEIPEHYL-PEHQYTTIKQTSYSTVQHNLYPTIQENYP 243
T N EK+K P + ++E+D E P L PE +K + YSTV Y ++ +
Sbjct: 5 TSSINGEKRKSPCESNNENDEMQETPNRDLAPEPSLKKMKTSEYSTVLAFCYRKAKKIHS 64
Query: 242 N 240
N
Sbjct: 65 N 65
>D87930-1|BAA22378.1| 1030|Homo sapiens myosin phosphatase target
subunit 1 protein.
Length = 1030
Score = 29.9 bits (64), Expect = 4.6
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = -1
Query: 404 KEKQKEPDDFSSEDDYTTEIPEHYLPEHQY--------TTIKQTSYSTVQHNLYPTIQEN 249
K+++K+ + S ED+Y + Y +Q +T +S ST+ +LY + Q N
Sbjct: 739 KQEEKKESETSREDEYKQKYSRTYDETYQRYRPVSTSSSTTPSSSLSTMSSSLYASSQLN 798
Query: 248 YPNDQQVQYTTEQQHYSSKPHEEYPSKR 165
PN V T+ +K +E KR
Sbjct: 799 RPN-SLVGITSAYSRGITKENEREGEKR 825
>BC111752-1|AAI11753.1| 1030|Homo sapiens PPP1R12A protein protein.
Length = 1030
Score = 29.9 bits (64), Expect = 4.6
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = -1
Query: 404 KEKQKEPDDFSSEDDYTTEIPEHYLPEHQY--------TTIKQTSYSTVQHNLYPTIQEN 249
K+++K+ + S ED+Y + Y +Q +T +S ST+ +LY + Q N
Sbjct: 739 KQEEKKESETSREDEYKQKYSRTYDETYQRYRPVSTSSSTTPSSSLSTMSSSLYASSQLN 798
Query: 248 YPNDQQVQYTTEQQHYSSKPHEEYPSKR 165
PN V T+ +K +E KR
Sbjct: 799 RPN-SLVGITSAYSRGITKENEREGEKR 825
>AF458589-1|AAM49717.1| 995|Homo sapiens myosin phosphatase target
subunit 1 variant protein.
Length = 995
Score = 29.9 bits (64), Expect = 4.6
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = -1
Query: 404 KEKQKEPDDFSSEDDYTTEIPEHYLPEHQY--------TTIKQTSYSTVQHNLYPTIQEN 249
K+++K+ + S ED+Y + Y +Q +T +S ST+ +LY + Q N
Sbjct: 739 KQEEKKESETSREDEYKQKYSRTYDETYQRYRPVSTSSSTTPSSSLSTMSSSLYASSQLN 798
Query: 248 YPNDQQVQYTTEQQHYSSKPHEEYPSKR 165
PN V T+ +K +E KR
Sbjct: 799 RPN-SLVGITSAYSRGITKENEREGEKR 825
>AF230662-1|AAF79937.1| 492|Homo sapiens unknown protein.
Length = 492
Score = 29.9 bits (64), Expect = 4.6
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -1
Query: 323 HQYTTIKQTSYSTVQHNLYPTIQENYPNDQQVQYTTEQQHYSSKPHEEYPSKRY-DYPTA 147
HQY + S YP Q+ YP Q Y +QQ Y P + P +Y +YP
Sbjct: 331 HQYGQQQDASQGPPPQQGYPPQQQQYPGQQ--GYPGQQQGYG--PSQGGPGPQYPNYPQG 386
Query: 146 Q 144
Q
Sbjct: 387 Q 387
>X78520-2|CAA55281.1| 762|Homo sapiens chloride channel 3 protein.
Length = 762
Score = 29.5 bits (63), Expect = 6.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 311 WCTDVPEGSAQVSLWYNH 364
W TD+ EG +LWYNH
Sbjct: 94 WMTDLKEGICLSALWYNH 111
>X78520-1|CAA55280.1| 820|Homo sapiens chloride channel 3 protein.
Length = 820
Score = 29.5 bits (63), Expect = 6.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 311 WCTDVPEGSAQVSLWYNH 364
W TD+ EG +LWYNH
Sbjct: 152 WMTDLKEGICLSALWYNH 169
>BC096223-1|AAH96223.1| 418|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 418
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -1
Query: 341 EHYLPE-HQYTTIKQTSYSTVQHNL-YPTIQENYPNDQQVQYTTEQQHYSSKPHEE-YPS 171
+ Y P+ H +Q SY ++ Y ++Y QY +Q Y P ++ YP
Sbjct: 288 QQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPP 347
Query: 170 KRYDYPTAQPVP 135
++ YP Q P
Sbjct: 348 QQQQYPGQQGYP 359
>BC096222-1|AAH96222.1| 418|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 418
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -1
Query: 341 EHYLPE-HQYTTIKQTSYSTVQHNL-YPTIQENYPNDQQVQYTTEQQHYSSKPHEE-YPS 171
+ Y P+ H +Q SY ++ Y ++Y QY +Q Y P ++ YP
Sbjct: 288 QQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPP 347
Query: 170 KRYDYPTAQPVP 135
++ YP Q P
Sbjct: 348 QQQQYPGQQGYP 359
>BC054877-1|AAH54877.1| 191|Homo sapiens CLCN3 protein protein.
Length = 191
Score = 29.5 bits (63), Expect = 6.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 311 WCTDVPEGSAQVSLWYNH 364
W TD+ EG +LWYNH
Sbjct: 152 WMTDLKEGICLSALWYNH 169
>AF343880-1|AAK21314.1| 422|Homo sapiens SYT variant 1 protein.
Length = 422
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -1
Query: 341 EHYLPE-HQYTTIKQTSYSTVQHNL-YPTIQENYPNDQQVQYTTEQQHYSSKPHEE-YPS 171
+ Y P+ H +Q SY ++ Y ++Y QY +Q Y P ++ YP
Sbjct: 292 QQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPP 351
Query: 170 KRYDYPTAQPVP 135
++ YP Q P
Sbjct: 352 QQQQYPGQQGYP 363
>AF257500-1|AAG31034.1| 492|Homo sapiens SYT/SSX4 fusion protein
protein.
Length = 492
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -1
Query: 341 EHYLPE-HQYTTIKQTSYSTVQHNL-YPTIQENYPNDQQVQYTTEQQHYSSKPHEE-YPS 171
+ Y P+ H +Q SY ++ Y ++Y QY +Q Y P ++ YP
Sbjct: 292 QQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPP 351
Query: 170 KRYDYPTAQPVP 135
++ YP Q P
Sbjct: 352 QQQQYPGQQGYP 363
>AF244972-1|AAM00188.1| 414|Homo sapiens SYT protein protein.
Length = 414
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -1
Query: 341 EHYLPE-HQYTTIKQTSYSTVQHNL-YPTIQENYPNDQQVQYTTEQQHYSSKPHEE-YPS 171
+ Y P+ H +Q SY ++ Y ++Y QY +Q Y P ++ YP
Sbjct: 292 QQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPP 351
Query: 170 KRYDYPTAQPVP 135
++ YP Q P
Sbjct: 352 QQQQYPGQQGYP 363
>AF172729-1|AAD51034.1| 818|Homo sapiens chloride channel 3
protein.
Length = 818
Score = 29.5 bits (63), Expect = 6.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 311 WCTDVPEGSAQVSLWYNH 364
W TD+ EG +LWYNH
Sbjct: 152 WMTDLKEGICLSALWYNH 169
>AF029346-1|AAB95161.1| 818|Homo sapiens chloride channel protein 3
protein.
Length = 818
Score = 29.5 bits (63), Expect = 6.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 311 WCTDVPEGSAQVSLWYNH 364
W TD+ EG +LWYNH
Sbjct: 152 WMTDLKEGICLSALWYNH 169
>AB300356-1|BAF56183.1| 488|Homo sapiens fusion protein SYT-SSX2
protein.
Length = 488
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -1
Query: 341 EHYLPE-HQYTTIKQTSYSTVQHNL-YPTIQENYPNDQQVQYTTEQQHYSSKPHEE-YPS 171
+ Y P+ H +Q SY ++ Y ++Y QY +Q Y P ++ YP
Sbjct: 288 QQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPP 347
Query: 170 KRYDYPTAQPVP 135
++ YP Q P
Sbjct: 348 QQQQYPGQQGYP 359
>AB300354-1|BAF56181.1| 488|Homo sapiens fusion protein SYT-SSX1
protein.
Length = 488
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -1
Query: 341 EHYLPE-HQYTTIKQTSYSTVQHNL-YPTIQENYPNDQQVQYTTEQQHYSSKPHEE-YPS 171
+ Y P+ H +Q SY ++ Y ++Y QY +Q Y P ++ YP
Sbjct: 288 QQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPP 347
Query: 170 KRYDYPTAQPVP 135
++ YP Q P
Sbjct: 348 QQQQYPGQQGYP 359
>AB019542-1|BAC54560.1| 810|Homo sapiens clcn3e protein.
Length = 810
Score = 29.5 bits (63), Expect = 6.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 311 WCTDVPEGSAQVSLWYNH 364
W TD+ EG +LWYNH
Sbjct: 94 WMTDLKEGICLSALWYNH 111
>X79201-1|CAA55792.1| 391|Homo sapiens SYT protein.
Length = 391
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 257 QENYPNDQQVQYTTEQQHYSSKPHEE-YPSKRYDYPTAQPVP 135
Q+ YP D QY +Q Y P ++ YP ++ YP Q P
Sbjct: 292 QQYYP-DGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYP 332
>U59464-1|AAC50550.1| 1447|Homo sapiens PATCHED protein.
Length = 1447
Score = 29.1 bits (62), Expect = 8.0
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -1
Query: 422 TTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQ-TSYSTVQHNLYPTIQENY 246
T+PC ++ Q EP ++ D T P H + Q T STVQ ++ Y
Sbjct: 615 TSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ------LRTEY 668
Query: 245 PNDQQVQYTTEQ 210
V YTT +
Sbjct: 669 DPHTHVYYTTAE 680
>U43148-1|AAC50496.1| 1296|Homo sapiens PTC protein.
Length = 1296
Score = 29.1 bits (62), Expect = 8.0
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -1
Query: 422 TTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQ-TSYSTVQHNLYPTIQENY 246
T+PC ++ Q EP ++ D T P H + Q T STVQ ++ Y
Sbjct: 464 TSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ------LRTEY 517
Query: 245 PNDQQVQYTTEQ 210
V YTT +
Sbjct: 518 DPHTHVYYTTAE 529
>CR542103-1|CAG46900.1| 391|Homo sapiens SS18 protein.
Length = 391
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 257 QENYPNDQQVQYTTEQQHYSSKPHEE-YPSKRYDYPTAQPVP 135
Q+ YP D QY +Q Y P ++ YP ++ YP Q P
Sbjct: 292 QQYYP-DGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYP 332
>CR542088-1|CAG46885.1| 391|Homo sapiens SS18 protein.
Length = 391
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 257 QENYPNDQQVQYTTEQQHYSSKPHEE-YPSKRYDYPTAQPVP 135
Q+ YP D QY +Q Y P ++ YP ++ YP Q P
Sbjct: 292 QQYYP-DGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYP 332
>BC096224-1|AAH96224.1| 387|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 387
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 257 QENYPNDQQVQYTTEQQHYSSKPHEE-YPSKRYDYPTAQPVP 135
Q+ YP D QY +Q Y P ++ YP ++ YP Q P
Sbjct: 288 QQYYP-DGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYP 328
>BC096221-1|AAH96221.1| 387|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 387
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 257 QENYPNDQQVQYTTEQQHYSSKPHEE-YPSKRYDYPTAQPVP 135
Q+ YP D QY +Q Y P ++ YP ++ YP Q P
Sbjct: 288 QQYYP-DGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYP 328
>AY395768-1|AAR21239.1| 651|Homo sapiens patched protein.
Length = 651
Score = 29.1 bits (62), Expect = 8.0
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -1
Query: 422 TTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQ-TSYSTVQHNLYPTIQENY 246
T+PC ++ Q EP ++ D T P H + Q T STVQ ++ Y
Sbjct: 210 TSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ------LRTEY 263
Query: 245 PNDQQVQYTTEQ 210
V YTT +
Sbjct: 264 DPHTHVYYTTAE 275
>AL161729-2|CAH73818.1| 1296|Homo sapiens patched homolog 1
(Drosophila) protein.
Length = 1296
Score = 29.1 bits (62), Expect = 8.0
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -1
Query: 422 TTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQ-TSYSTVQHNLYPTIQENY 246
T+PC ++ Q EP ++ D T P H + Q T STVQ ++ Y
Sbjct: 464 TSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ------LRTEY 517
Query: 245 PNDQQVQYTTEQ 210
V YTT +
Sbjct: 518 DPHTHVYYTTAE 529
>AL161729-1|CAH73817.1| 1447|Homo sapiens patched homolog 1
(Drosophila) protein.
Length = 1447
Score = 29.1 bits (62), Expect = 8.0
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -1
Query: 422 TTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQ-TSYSTVQHNLYPTIQENY 246
T+PC ++ Q EP ++ D T P H + Q T STVQ ++ Y
Sbjct: 615 TSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ------LRTEY 668
Query: 245 PNDQQVQYTTEQ 210
V YTT +
Sbjct: 669 DPHTHVYYTTAE 680
>AB300357-1|BAF56184.1| 457|Homo sapiens fusion protein SYT-SSX2
protein.
Length = 457
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 257 QENYPNDQQVQYTTEQQHYSSKPHEE-YPSKRYDYPTAQPVP 135
Q+ YP D QY +Q Y P ++ YP ++ YP Q P
Sbjct: 288 QQYYP-DGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYP 328
>AB300355-1|BAF56182.1| 457|Homo sapiens fusion protein SYT-SSX1
protein.
Length = 457
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 257 QENYPNDQQVQYTTEQQHYSSKPHEE-YPSKRYDYPTAQPVP 135
Q+ YP D QY +Q Y P ++ YP ++ YP Q P
Sbjct: 288 QQYYP-DGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYP 328
>AB233422-1|BAE45302.1| 348|Homo sapiens PTCH protein -10 protein.
Length = 348
Score = 29.1 bits (62), Expect = 8.0
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -1
Query: 422 TTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQ-TSYSTVQHNLYPTIQENY 246
T+PC ++ Q EP ++ D T P H + Q T STVQ ++ Y
Sbjct: 276 TSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ------LRTEY 329
Query: 245 PNDQQVQYTTEQ 210
V YTT +
Sbjct: 330 DPHTHVYYTTAE 341
>AB209495-1|BAD92732.1| 586|Homo sapiens patched variant protein.
Length = 586
Score = 29.1 bits (62), Expect = 8.0
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -1
Query: 422 TTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQ-TSYSTVQHNLYPTIQENY 246
T+PC ++ Q EP ++ D T P H + Q T STVQ ++ Y
Sbjct: 51 TSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ------LRTEY 104
Query: 245 PNDQQVQYTTEQ 210
V YTT +
Sbjct: 105 DPHTHVYYTTAE 116
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,028,172
Number of Sequences: 237096
Number of extensions: 1134891
Number of successful extensions: 3419
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 3263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3413
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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