Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS319B01f
(467 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92834-6|CAB07391.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.31
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 30 0.95
Z75543-2|CAA99870.1| 529|Caenorhabditis elegans Hypothetical pr... 29 1.3
X76114-1|CAA53720.1| 290|Caenorhabditis elegans Oxoglutarate/ma... 29 1.3
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 29 1.3
U23525-8|AAC46570.1| 290|Caenorhabditis elegans Hypothetical pr... 29 1.3
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 29 1.3
Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical pr... 29 1.7
U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein. 29 1.7
U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated p... 29 2.2
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 29 2.2
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 29 2.2
U28944-18|AAA68375.2| 246|Caenorhabditis elegans Helix loop hel... 29 2.2
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 29 2.2
L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 28 3.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 3.8
U00048-9|AAB53824.1| 208|Caenorhabditis elegans Hypothetical pr... 28 3.8
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 28 3.8
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 28 3.8
U00063-5|AAK18963.1| 182|Caenorhabditis elegans Hypothetical pr... 27 5.1
L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical pr... 27 5.1
AF099918-5|AAK29841.2| 391|Caenorhabditis elegans Hypothetical ... 27 5.1
Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z81494-7|CAI79161.1| 387|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 27 8.9
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 8.9
U22833-2|AAA64322.2| 707|Caenorhabditis elegans Temporarily ass... 27 8.9
AY323527-1|AAP78770.1| 563|Caenorhabditis elegans grainyhead tr... 27 8.9
AC024797-1|AAF60703.3| 563|Caenorhabditis elegans Grainyhead (d... 27 8.9
>Z92834-6|CAB07391.1| 312|Caenorhabditis elegans Hypothetical
protein F39B2.11 protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.31
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Frame = -1
Query: 434 SETGTTPC-ANKEKQKEP-DDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYST----VQHN 273
S +G P A E + +P DF D + + + + TTI++ + HN
Sbjct: 44 SPSGELPMVAQTEGEAKPVTDFEKFVDILKKCGQDVVIDADLTTIEKAQLDAFSCYLHHN 103
Query: 272 LYPTIQENYPNDQQVQYTTEQQHYSSKPHEEY 177
LYP + + D+ T Q Y+S H Y
Sbjct: 104 LYPAVMHTFWTDELNYNTVTQYWYASHLHFPY 135
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 29.9 bits (64), Expect = 0.95
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = -1
Query: 434 SETGTTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTIQ 255
S + +P + ++ DD S++ +T EH++PE K+T H P +
Sbjct: 2763 SHSPESPVPEYQSEQYQDD-SAQSSHTDF--EHHMPESPIEHEKETEEFDHSHPESPVLS 2819
Query: 254 ENYPNDQQVQYTTE----QQHYSSKPHEE 180
E +DQ TT + Y+ +P +E
Sbjct: 2820 EKERDDQVTSETTTTTTVTREYNDEPEDE 2848
Score = 27.1 bits (57), Expect = 6.7
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -1
Query: 449 NDIIISETGTTPCANKEKQKEPDDFSSEDDYTTEIP-EHYLPEHQYTTIKQTSYSTV 282
+D + SET TT +E EP+D + P H EH + ++ T+ +TV
Sbjct: 2824 DDQVTSETTTTTTVTREYNDEPEDEQEHQGPHSPAPSSHTEAEHPH-IVETTTTTTV 2879
>Z75543-2|CAA99870.1| 529|Caenorhabditis elegans Hypothetical
protein K01D12.2 protein.
Length = 529
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 347 IPEHYLPEHQYTTIKQTSYSTVQHNLYPT--IQENYPNDQQVQYTTEQQHYSSKPHEE 180
+PE + ++ Q SYS H P I +Y N+QQ + ++Q H PH++
Sbjct: 26 VPECNINSTTQDSVPQYSYSPATHTDIPLLFIHSSYQNNQQRAHGSQQHHIF--PHQQ 81
>X76114-1|CAA53720.1| 290|Caenorhabditis elegans
Oxoglutarate/malate carrier protein protein.
Length = 290
Score = 29.5 bits (63), Expect = 1.3
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = -1
Query: 314 TTIKQTSYSTVQHNLYPTIQENYPNDQQVQY 222
+ ++Q +YST + +Y T+++ P DQ + +
Sbjct: 69 SVLRQLTYSTTRFGIYETVKKQLPQDQPLPF 99
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/94 (21%), Positives = 37/94 (39%)
Frame = -1
Query: 422 TTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTIQENYP 243
TT A + E + SSE++ TTE + + TT T S + + + +
Sbjct: 131 TTTTAAPAESAETETPSSEENKTTEEESGNVSAEEVTTTSSTEVSVEEEQTVKSTEASTE 190
Query: 242 NDQQVQYTTEQQHYSSKPHEEYPSKRYDYPTAQP 141
++ + + E SS+ E + T +P
Sbjct: 191 EEKSTEASEEATTTSSETSETTEESEEEETTTKP 224
>U23525-8|AAC46570.1| 290|Caenorhabditis elegans Hypothetical
protein K11G12.5 protein.
Length = 290
Score = 29.5 bits (63), Expect = 1.3
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = -1
Query: 314 TTIKQTSYSTVQHNLYPTIQENYPNDQQVQY 222
+ ++Q +YST + +Y T+++ P DQ + +
Sbjct: 69 SVLRQLTYSTTRFGIYETVKKQLPQDQPLPF 99
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/103 (19%), Positives = 39/103 (37%)
Frame = -1
Query: 443 IIISETGTTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYP 264
I + + P ++++Q++P Y + LP Q ++ QH +
Sbjct: 975 IQLPQRSQAPAPSRQQQQQPPVA-----YQVQFNGRPLPPMQLPPLQNPHNQQQQHQMLH 1029
Query: 263 TIQENYPNDQQVQYTTEQQHYSSKPHEEYPSKRYDYPTAQPVP 135
Q NY QQVQ Q + ++ + +++ Q P
Sbjct: 1030 QSQMNYQQVQQVQQVQHVQQQQNLQNQHHHQQQHHQQNQQQAP 1072
>Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical protein
F39B2.4b protein.
Length = 1589
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = -1
Query: 341 EHYLPEHQYTTIKQTSYSTVQHNLYPTIQENYPNDQQVQYTTEQQHYSSKPHEEYPSKRY 162
+H+L H T T QH Q N+P QQ+Q+ + +YP +
Sbjct: 1451 QHHLQHHTST---HQMMDTSQHQTIQQ-QSNHPTQQQLQHQIPNMSMHQQMGPQYPGAVF 1506
Query: 161 DYPTAQPVP*FQLTFIVIGHLQ 96
+P+ PV + + + H+Q
Sbjct: 1507 HHPSG-PVGHVPMQYGMGHHMQ 1527
>Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical protein
F39B2.4a protein.
Length = 1587
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = -1
Query: 341 EHYLPEHQYTTIKQTSYSTVQHNLYPTIQENYPNDQQVQYTTEQQHYSSKPHEEYPSKRY 162
+H+L H T T QH Q N+P QQ+Q+ + +YP +
Sbjct: 1449 QHHLQHHTST---HQMMDTSQHQTIQQ-QSNHPTQQQLQHQIPNMSMHQQMGPQYPGAVF 1504
Query: 161 DYPTAQPVP*FQLTFIVIGHLQ 96
+P+ PV + + + H+Q
Sbjct: 1505 HHPSG-PVGHVPMQYGMGHHMQ 1525
>Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical
protein T06D8.2 protein.
Length = 708
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -1
Query: 362 DYTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTI-QENYPNDQQVQYTTEQQHYSSKPH 186
D+ IP++ +P+H+Y+ Q ++ N + E++ + Q S+K
Sbjct: 148 DFKPGIPQNVIPDHKYSKELQAMIGAIERNKQTAVANEDFKLAKSAQLAVRDLKKSTKEM 207
Query: 185 EE 180
EE
Sbjct: 208 EE 209
>U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein.
Length = 1587
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = -1
Query: 341 EHYLPEHQYTTIKQTSYSTVQHNLYPTIQENYPNDQQVQYTTEQQHYSSKPHEEYPSKRY 162
+H+L H T T QH Q N+P QQ+Q+ + +YP +
Sbjct: 1449 QHHLQHHTST---HQMMDTSQHQTIQQ-QSNHPTQQQLQHQIPNMSMHQQMGPQYPGAVF 1504
Query: 161 DYPTAQPVP*FQLTFIVIGHLQ 96
+P+ PV + + + H+Q
Sbjct: 1505 HHPSG-PVGHVPMQYGMGHHMQ 1525
>U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated
protein 2, isoform d protein.
Length = 286
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = -1
Query: 359 YTTEIPEHYLPEHQYTT----IKQTSYSTVQHNLYPTIQENYPNDQQVQYTTEQQHYSSK 192
Y TE P E+Q + I++ Y+T++H+ + + + QQ Q QQH
Sbjct: 19 YRTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRSSHDPQYHQDQQQQQQPHHQQHSQHL 78
Query: 191 PHEEY 177
H +
Sbjct: 79 QHSHH 83
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = -1
Query: 359 YTTEIPEHYLPEHQYTT----IKQTSYSTVQHNLYPTIQENYPNDQQVQYTTEQQHYSSK 192
Y TE P E+Q + I++ Y+T++H+ + + + QQ Q QQH
Sbjct: 1659 YRTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRSSHDPQYHQDQQQQQQPHHQQHSQHL 1718
Query: 191 PHEEY 177
H +
Sbjct: 1719 QHSHH 1723
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = -1
Query: 359 YTTEIPEHYLPEHQYTT----IKQTSYSTVQHNLYPTIQENYPNDQQVQYTTEQQHYSSK 192
Y TE P E+Q + I++ Y+T++H+ + + + QQ Q QQH
Sbjct: 1760 YRTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRSSHDPQYHQDQQQQQQPHHQQHSQHL 1819
Query: 191 PHEEY 177
H +
Sbjct: 1820 QHSHH 1824
>U28944-18|AAA68375.2| 246|Caenorhabditis elegans Helix loop helix
protein 14 protein.
Length = 246
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/84 (20%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = -1
Query: 434 SETGTTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNL-YPTI 258
S + +TP ++++ +++++ +P++Y P++Q + + V HN PT
Sbjct: 166 SVSSSTPDYTMNNSNNFNNYAVKEEFSMYLPQNYCPQNQMS----VPHGDVSHNFNSPTS 221
Query: 257 QENYPNDQQVQYTTEQQHYSSKPH 186
+ + Q YS+ PH
Sbjct: 222 SVSSSSYSPTQMCYPPVSYSNYPH 245
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = -1
Query: 359 YTTEIPEHYLPEHQYTT----IKQTSYSTVQHNLYPTIQENYPNDQQVQYTTEQQHYSSK 192
Y TE P E+Q + I++ Y+T++H+ + + + QQ Q QQH
Sbjct: 1760 YRTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRSSHDPQYHQDQQQQQQPHHQQHSQHL 1819
Query: 191 PHEEY 177
H +
Sbjct: 1820 QHSHH 1824
>L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical
protein ZC21.3 protein.
Length = 321
Score = 28.3 bits (60), Expect = 2.9
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = -1
Query: 398 KQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTIQENYPNDQQVQYT 219
+Q++P + Y + + Y P+ Q TS+S+ +Y T NYP Q +
Sbjct: 19 QQQQPQQQYNTQQYNPQ-QQQYNPQQQQQ-YGTTSFSSNGQAMYQTGTTNYPTLYQPS-S 75
Query: 218 TEQQHYSSKPHEEY-PSKRYDY 156
+ Q+ + P Y P+ Y Y
Sbjct: 76 SSPQYSNGAPSTTYSPTSTYGY 97
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical protein
Y76A2B.1 protein.
Length = 1057
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/65 (20%), Positives = 32/65 (49%)
Frame = -1
Query: 329 PEHQYTTIKQTSYSTVQHNLYPTIQENYPNDQQVQYTTEQQHYSSKPHEEYPSKRYDYPT 150
P+ +++I + ++V+H+ P+ + Q +T H +++ H + ++ PT
Sbjct: 944 PDGVFSSIPRAITASVRHSEMPSSSSTTNSAAQTP-STSVTHSTTEKHHHHQHHQHQEPT 1002
Query: 149 AQPVP 135
+ P P
Sbjct: 1003 SVPTP 1007
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -1
Query: 278 HNLYPTIQENYPNDQQVQYTTEQQHYSSKPHEEYPSKRYDYPTAQP 141
HN +Q+ + QQ Q +H SS H+E +R+ P+ P
Sbjct: 179 HNQQKQLQQQHHQQQQQQLAFRPRHRSSHHHQE--PRRHRAPSPDP 222
>U00048-9|AAB53824.1| 208|Caenorhabditis elegans Hypothetical
protein C05D11.3 protein.
Length = 208
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/50 (22%), Positives = 26/50 (52%)
Frame = -1
Query: 383 DDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTIQENYPNDQ 234
D+ +D++TTE E+ L + T+++ + + + + E Y N++
Sbjct: 157 DELGGKDEFTTETMENRLARSEVLTVEKKHTAPAKKKIIRSGVEEYDNEE 206
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/65 (20%), Positives = 32/65 (49%)
Frame = -1
Query: 329 PEHQYTTIKQTSYSTVQHNLYPTIQENYPNDQQVQYTTEQQHYSSKPHEEYPSKRYDYPT 150
P+ +++I + ++V+H+ P+ + Q +T H +++ H + ++ PT
Sbjct: 944 PDGVFSSIPRAITASVRHSEMPSSSSTTNSAAQTP-STSVTHSTTEKHHHHQHHQHQEPT 1002
Query: 149 AQPVP 135
+ P P
Sbjct: 1003 SVPTP 1007
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/65 (20%), Positives = 32/65 (49%)
Frame = -1
Query: 329 PEHQYTTIKQTSYSTVQHNLYPTIQENYPNDQQVQYTTEQQHYSSKPHEEYPSKRYDYPT 150
P+ +++I + ++V+H+ P+ + Q +T H +++ H + ++ PT
Sbjct: 944 PDGVFSSIPRAITASVRHSEMPSSSSTTNSAAQTP-STSVTHSTTEKHHHHQHHQHQEPT 1002
Query: 149 AQPVP 135
+ P P
Sbjct: 1003 SVPTP 1007
>U00063-5|AAK18963.1| 182|Caenorhabditis elegans Hypothetical
protein F56C9.8 protein.
Length = 182
Score = 27.5 bits (58), Expect = 5.1
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -1
Query: 317 YTTIKQTSYSTVQHNLYPTIQENYPNDQQVQYTTEQQHYSSKPHEEYPSKRYDY--PTAQ 144
Y + ++ S + L+ N Q QY EQQ S P+ P++ YDY P
Sbjct: 42 YAAVVRSMRSDDKQRLHSGRNSAQWNQPQQQYR-EQQPASDFPYNPAPTQNYDYNAPIRT 100
Query: 143 PV 138
PV
Sbjct: 101 PV 102
>L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical protein
F54F2.1 protein.
Length = 1226
Score = 27.5 bits (58), Expect = 5.1
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = -1
Query: 401 EKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTIQENYPNDQQVQY 222
E +E DD S ED+ TT+ Q+ T Q+ V I++N N Q V+
Sbjct: 917 EYSREEDDESYEDETTTQSQSTRHQSTQHQTHHQSGPVHVYEKDEEKIRQNTGNWQYVED 976
Query: 221 TTEQQHYSSKPHEE 180
++ Y P ++
Sbjct: 977 KKKKGDYEYIPDDQ 990
>AF099918-5|AAK29841.2| 391|Caenorhabditis elegans Hypothetical
protein H05C05.3 protein.
Length = 391
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -2
Query: 463 PXQNGMILLLVKQVPHHVQTKKNKKNQMISLQKMIIPQRYLSTTFRNI 320
P +NG+ LV P H++ K ++M+ L R+L NI
Sbjct: 200 PDENGLNFTLVVITPQHMENLKKYSHKMVLLDDTHNVSRFLVIQLDNI 247
>Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical
protein F29C12.1b protein.
Length = 590
Score = 27.1 bits (57), Expect = 6.7
Identities = 18/107 (16%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Frame = -1
Query: 449 NDIIISETGTTPCANKEKQ----KEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTV 282
N + +++ G + +++Q + +++S++ Y + P+ P+ +Q Y+
Sbjct: 285 NPLTVNQQGISTLQTQQQQYGQVQHQGNYNSQN-YNQQQPQQ--PQIPQLPQQQQQYNQQ 341
Query: 281 QHNLYPTIQENYPNDQQVQYTTEQQHYSSKPHEEYPSKRYDYPTAQP 141
+ + + + QQ QY +QQ + + ++ ++Y QP
Sbjct: 342 YNQQFNPPYQQFQQPQQQQYNQQQQQQTPQQNQYNQQQQYGQQPQQP 388
>Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical
protein F29C12.1a protein.
Length = 592
Score = 27.1 bits (57), Expect = 6.7
Identities = 18/107 (16%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Frame = -1
Query: 449 NDIIISETGTTPCANKEKQ----KEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTV 282
N + +++ G + +++Q + +++S++ Y + P+ P+ +Q Y+
Sbjct: 287 NPLTVNQQGISTLQTQQQQYGQVQHQGNYNSQN-YNQQQPQQ--PQIPQLPQQQQQYNQQ 343
Query: 281 QHNLYPTIQENYPNDQQVQYTTEQQHYSSKPHEEYPSKRYDYPTAQP 141
+ + + + QQ QY +QQ + + ++ ++Y QP
Sbjct: 344 YNQQFNPPYQQFQQPQQQQYNQQQQQQTPQQNQYNQQQQYGQQPQQP 390
>Z81494-7|CAI79161.1| 387|Caenorhabditis elegans Hypothetical
protein F02E9.10b protein.
Length = 387
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -1
Query: 242 NDQQVQYTTEQQHYSSKPHEEYPSKRY-DY-PTAQP 141
N+ YT E H + HEEY + +Y +Y P A+P
Sbjct: 311 NEPPSDYTQEGGHEYYRSHEEYDAAQYQEYNPYAEP 346
>Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical
protein F02E9.10a protein.
Length = 451
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -1
Query: 242 NDQQVQYTTEQQHYSSKPHEEYPSKRY-DY-PTAQP 141
N+ YT E H + HEEY + +Y +Y P A+P
Sbjct: 375 NEPPSDYTQEGGHEYYRSHEEYDAAQYQEYNPYAEP 410
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 26.6 bits (56), Expect = 8.9
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = -1
Query: 353 TEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTIQENY-P-NDQQVQYTTEQQHYS 198
TE + + EH Y I T++ T +HN+ T + +Y P +QVQ TE + ++
Sbjct: 792 TEAVKDVVHEHHY--IPLTAHKTDEHNVNITREHHYIPLKTEQVQSKTEIERHN 843
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 26.6 bits (56), Expect = 8.9
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = -1
Query: 353 TEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTIQENY-P-NDQQVQYTTEQQHYS 198
TE + + EH Y I T++ T +HN+ T + +Y P +QVQ TE + ++
Sbjct: 792 TEAVKDVVHEHHY--IPLTAHKTDEHNVNITREHHYIPLKTEQVQSKTEIERHN 843
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 26.6 bits (56), Expect = 8.9
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = -1
Query: 434 SETGTTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTI- 258
S + +P + ++ DD S++ +T EH++PE K+T H P +
Sbjct: 2763 SHSPESPVPEYQSEQYQDD-SAQSSHTDF--EHHMPESPIEHEKETEEFDHSHPESPVLS 2819
Query: 257 ---QENYPNDQQVQYTTEQQHYSSKPHEE 180
+E+ + TT + Y+ +P +E
Sbjct: 2820 EKEREHQVTSETTTTTTVTREYNDEPEDE 2848
>U22833-2|AAA64322.2| 707|Caenorhabditis elegans Temporarily
assigned gene nameprotein 161 protein.
Length = 707
Score = 26.6 bits (56), Expect = 8.9
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -1
Query: 401 EKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTIQENYPNDQQVQY 222
EK + PD+ ++ EI +H++ S ++QH Y +++N P D +Y
Sbjct: 93 EKMETPDERLTK---AREIYDHHIMVEMLAHAHNYSKESLQHVQYHLLKQNVPPDLFHRY 149
Query: 221 TTE 213
E
Sbjct: 150 VLE 152
>AY323527-1|AAP78770.1| 563|Caenorhabditis elegans grainyhead
transcription factor protein.
Length = 563
Score = 26.6 bits (56), Expect = 8.9
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = -1
Query: 422 TTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTIQENYP 243
T P E + EP D +S + ++ + + Y +QTS Q Y + EN
Sbjct: 14 TAPPGRLEFKNEPIDIASSN--IQDLAKMQTLDGYY---QQTSLQLPQSQQYHRMYENVY 68
Query: 242 NDQQVQYTTEQ 210
N+QQ+ Y Q
Sbjct: 69 NNQQILYAQTQ 79
>AC024797-1|AAF60703.3| 563|Caenorhabditis elegans Grainyhead
(drosophila transcriptionfactor) homolog protein 1
protein.
Length = 563
Score = 26.6 bits (56), Expect = 8.9
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = -1
Query: 422 TTPCANKEKQKEPDDFSSEDDYTTEIPEHYLPEHQYTTIKQTSYSTVQHNLYPTIQENYP 243
T P E + EP D +S + ++ + + Y +QTS Q Y + EN
Sbjct: 14 TAPPGRLEFKNEPIDIASSN--IQDLAKMQTLDGYY---QQTSLQLPQSQQYHRMYENVY 68
Query: 242 NDQQVQYTTEQ 210
N+QQ+ Y Q
Sbjct: 69 NNQQILYAQTQ 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,237,782
Number of Sequences: 27780
Number of extensions: 201916
Number of successful extensions: 884
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -