Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS319A09f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66514-6|CAA91345.3|  337|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z46996-10|CAL22702.1|  337|Caenorhabditis elegans Hypothetical p...    29   1.5  
AF039048-12|AAB94241.2|  296|Caenorhabditis elegans Hypothetical...    29   1.5  
Z82261-7|CAH60757.2|  300|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z66514-6|CAA91345.3|  337|Caenorhabditis elegans Hypothetical
           protein K01A11.3 protein.
          Length = 337

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -3

Query: 336 NFLFEI*SLSCGLNQNQICSFELYLIISGTKFLMGRCG 223
           N L E  S  CG     +CS   Y +IS  K   G CG
Sbjct: 150 NALMEDLSTECGARHEPLCSMFSYQLISTLKGYTGGCG 187


>Z46996-10|CAL22702.1|  337|Caenorhabditis elegans Hypothetical
           protein K01A11.3 protein.
          Length = 337

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -3

Query: 336 NFLFEI*SLSCGLNQNQICSFELYLIISGTKFLMGRCG 223
           N L E  S  CG     +CS   Y +IS  K   G CG
Sbjct: 150 NALMEDLSTECGARHEPLCSMFSYQLISTLKGYTGGCG 187


>AF039048-12|AAB94241.2|  296|Caenorhabditis elegans Hypothetical
           protein F16B4.10 protein.
          Length = 296

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 466 GVHLYHLKDSCLSFETTLSTC 404
           G +L H+ DSC +F  TL+TC
Sbjct: 145 GKNLKHIPDSCTTFPCTLNTC 165


>Z82261-7|CAH60757.2|  300|Caenorhabditis elegans Hypothetical
           protein C35D6.10 protein.
          Length = 300

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 120 ICYFLYVITKLSRTLCALLIKILRYGRFFPV 212
           ICYFL++I++    +  L+      G FFP+
Sbjct: 97  ICYFLFIISQTFNIVVFLVAVEKWLGHFFPI 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,027,195
Number of Sequences: 27780
Number of extensions: 238152
Number of successful extensions: 504
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)