Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS318H11f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008300-1|AAH08300.1|  304|Homo sapiens PCNXL2 protein protein.       29   7.5  
AL139342-1|CAI18866.1|  937|Homo sapiens pecanex-like 2 (Drosoph...    29   7.5  
AL133289-1|CAI22872.1|  937|Homo sapiens pecanex-like 2 (Drosoph...    29   7.5  
AL122003-1|CAI22240.1|  937|Homo sapiens pecanex-like 2 (Drosoph...    29   7.5  
AJ504806-1|CAD43404.2| 1235|Homo sapiens SMC1beta protein protein.     29   7.5  

>BC008300-1|AAH08300.1|  304|Homo sapiens PCNXL2 protein protein.
          Length = 304

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -1

Query: 356 YRFFMAKITVIFFHFDY 306
           Y+F     TVIFFHFDY
Sbjct: 259 YQFINLSFTVIFFHFDY 275


>AL139342-1|CAI18866.1|  937|Homo sapiens pecanex-like 2
           (Drosophila) protein.
          Length = 937

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -1

Query: 356 YRFFMAKITVIFFHFDY 306
           Y+F     TVIFFHFDY
Sbjct: 43  YQFINLSFTVIFFHFDY 59


>AL133289-1|CAI22872.1|  937|Homo sapiens pecanex-like 2
           (Drosophila) protein.
          Length = 937

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -1

Query: 356 YRFFMAKITVIFFHFDY 306
           Y+F     TVIFFHFDY
Sbjct: 43  YQFINLSFTVIFFHFDY 59


>AL122003-1|CAI22240.1|  937|Homo sapiens pecanex-like 2
           (Drosophila) protein.
          Length = 937

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -1

Query: 356 YRFFMAKITVIFFHFDY 306
           Y+F     TVIFFHFDY
Sbjct: 43  YQFINLSFTVIFFHFDY 59


>AJ504806-1|CAD43404.2| 1235|Homo sapiens SMC1beta protein protein.
          Length = 1235

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +3

Query: 312 KMEKDYSYFCHKKSITHNNLLL-LSKNTIKRKLNKVN-WKFTILXG 443
           + E D   + +KK +T  N+ L  S++ +K+KLNK+N  K TI  G
Sbjct: 800 QQEIDQKRYFYKKMLTRLNVQLEYSRSHLKKKLNKINTLKETIQKG 845


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,836,547
Number of Sequences: 237096
Number of extensions: 710508
Number of successful extensions: 918
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)