Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS318H09f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 40 2e-04
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 33 0.026
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.026
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 32 0.045
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 32 0.060
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 32 0.060
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 31 0.14
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 30 0.18
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 30 0.24
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su... 29 0.42
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 29 0.56
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 29 0.56
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 29 0.56
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 28 0.73
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 0.73
SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual 27 1.7
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 27 2.2
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 2.2
SPBC16A3.08c |||nuclear telomere cap complex subunit |Schizosacc... 27 2.2
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 27 2.2
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 26 3.0
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 26 3.0
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 3.0
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 26 3.0
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 26 3.0
SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual 26 3.9
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 3.9
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 26 3.9
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 26 3.9
SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1 |... 26 3.9
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 25 5.2
SPCC285.08 |ret2||coatomer delta subunit Ret2 |Schizosaccharomyc... 25 5.2
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 25 6.8
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 6.8
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 25 6.8
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 25 6.8
SPCC5E4.10c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 6.8
SPAC664.03 |||RNA polymerase II associated Paf1 complex |Schizos... 25 9.0
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 25 9.0
SPAPB2B4.03 |cig2|cyc17|cyclin Cig2|Schizosaccharomyces pombe|ch... 25 9.0
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 9.0
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 39.9 bits (89), Expect = 2e-04
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Frame = +3
Query: 237 DRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEE-- 410
+++ A+ +A AE ++ K +EV +L L EQ+ E ++E ++ ++ ELEEE
Sbjct: 6 EKINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETK 65
Query: 411 -LRVVGNNLKSLEVSEEKAMASREHVEDKIHS 503
LR+ +N + E+ E +E+++ +
Sbjct: 66 QLRLKADNEDIQKTEAEQLSRKVELLEEELET 97
Score = 39.5 bits (88), Expect = 3e-04
Identities = 30/123 (24%), Positives = 59/123 (47%)
Frame = +3
Query: 147 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 326
A A+ EA A+ +E K +E + ++++ L + A+ EE +++ +++ +
Sbjct: 11 ARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETKQL--R 68
Query: 327 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 506
L +D+++ E AEQ K+ LEEEL L+ + EH E ++ SL
Sbjct: 69 LKADNEDIQKTE--AEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSL 126
Query: 507 SQK 515
++
Sbjct: 127 ERE 129
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 33.1 bits (72), Expect = 0.026
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 1/137 (0%)
Frame = +3
Query: 3 KDECEEYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAA 182
K E EE KR E + + E+E A + A AK +A
Sbjct: 562 KREAEEQAKR---EAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAK 618
Query: 183 DESE-RIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERA 359
E+E + ++ E + E + A EA+ +AK AEE K+ E K E+ A
Sbjct: 619 REAEEKAKREAEEKAKREAEEKAKREAE-EKAKREAEEKAKREAEENAKREAEEKAKREA 677
Query: 360 EERAEQSDCKIVELEEE 410
EE A++ + V+ E E
Sbjct: 678 EENAKREAEEKVKRETE 694
Score = 32.7 bits (71), Expect = 0.034
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +3
Query: 147 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 326
A ++SE +A+ + I+ A++ R + + A +A+ +A+L AEE+ K+ E K
Sbjct: 513 APPQISE-EEASQRKDAIKLAIQQRIQEKAEAEAKRKAE-EKARLEAEENAKREAEEQAK 570
Query: 327 LVLMEQDLERAEERAE-QSDCKIVELEEELRVVGNNLKSLEVSEEKAMASRE 479
E+ AEE+A+ +++ K EE K+ +EEKA E
Sbjct: 571 REAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAE 622
Score = 32.3 bits (70), Expect = 0.045
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 1/138 (0%)
Frame = +3
Query: 9 ECEEYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADE 188
E EE KR + E + EAE + A + A AK +A E
Sbjct: 556 EAEENAKR-EAEEQAKREAEEK--AKREAEEKAKREAEEKAKREAEENAKREAEEKAKRE 612
Query: 189 SE-RIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEE 365
+E + ++ E + E + A EA+ +AK AEE K+ E K E AEE
Sbjct: 613 AEEKAKREAEEKAKREAEEKAKREAE-EKAKREAEEKAKREAEEKAKREAEENAKREAEE 671
Query: 366 RAEQSDCKIVELEEELRV 419
+A++ + + E E +V
Sbjct: 672 KAKREAEENAKREAEEKV 689
Score = 31.5 bits (68), Expect = 0.079
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 6/170 (3%)
Frame = +3
Query: 3 KDECEEYHKRLQVEIMRRE-----EAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSE 167
K E EE KR E +RE + E+E A + A AK
Sbjct: 578 KREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREA 637
Query: 168 ASQAADESE-RIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQ 344
+A E+E + ++ E + E + A EA+ +AK AEE+ K+ E K E
Sbjct: 638 EEKAKREAEEKAKREAEEKAKREAEENAKREAE-EKAKREAEENAKREAEEKVKRETEEN 696
Query: 345 DLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDK 494
+AEE ++ K E++ + + +++ S++ A+ V DK
Sbjct: 697 AKRKAEEEGKREADKNPEIKSSAPLASSE-ANVDTSKQ-TNATEPEVVDK 744
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.026
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 366 VPPPSLGPAP*EQACAPPLRISCPTPRR*ASPVTVEP 256
+PPPS AP + APP+ S P P + A+PV P
Sbjct: 149 IPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 25.4 bits (53), Expect = 5.2
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Frame = -3
Query: 369 RVPPPSLGPAP*EQACAPPLRISCPTPRR*ASPVTVEPPRWQRDHP--PCWCGSPAPCVF 196
+VPPP L AP + P + P A VT E P++ P P P P
Sbjct: 200 KVPPPPLSQAPVANTSSRPSSFAPPAGH--APNVTSESPKFPNRGPSIPSASVPPVPPSS 257
Query: 195 ARIHRRP 175
+ +RP
Sbjct: 258 YVLQQRP 264
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 363 PPPSLGPAP*EQACAPPL 310
PPP PAP A APPL
Sbjct: 6 PPPPPAPAPAAAAPAPPL 23
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = -3
Query: 327 ACAPPLRISCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAP 205
+ APP + PTP+ P T PPR P P P
Sbjct: 121 SAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 32.3 bits (70), Expect = 0.045
Identities = 26/124 (20%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Frame = +3
Query: 153 AKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLS--QAKLIAEESDKKYEEVARK 326
+ ++E Q +R LE +T +R+ +E + Q+KLIA D +
Sbjct: 885 SNITELKQDITLQRTVRNQLEIQTTELKERLKFMEERQENLQSKLIAANKDTTQNPDNVE 944
Query: 327 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 506
+ + +LER +E+ ++ + ++++ + K+LE+ E + VE +I +
Sbjct: 945 VEAISIELERTKEKLRMAELEKSNIQQKYLA---SEKTLEMMNETHEQFKHLVESEISTR 1001
Query: 507 SQKL 518
+K+
Sbjct: 1002 EEKI 1005
Score = 28.3 bits (60), Expect = 0.73
Identities = 22/94 (23%), Positives = 42/94 (44%)
Frame = +3
Query: 240 RVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRV 419
R+ L +L K I+ +KK+EE L L + +++ ++ L E +
Sbjct: 671 RLEQLTNELESLKSISRNKEKKFEEAISSLQLEKSNIQ----------LQLTSLTSERSL 720
Query: 420 VGNNLKSLEVSEEKAMASREHVEDKIHSLSQKLA 521
L LE S + S++ +++ SL ++LA
Sbjct: 721 ALEKLNDLEKSLVLSERSKDELDESYKSLQEQLA 754
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 31.9 bits (69), Expect = 0.060
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +3
Query: 168 ASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEE-SDKKYE-EVARKLVLME 341
A+Q A E ER R A + + AI AQ Q ++ E+ + ++++ + +L +E
Sbjct: 362 AAQQAAEMERQRMAAQQHQQALE---AIQMAQAEQQRIAQEQLAQQQFQMQTQGQLAELE 418
Query: 342 QDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQKL 518
Q L + EQS+ + + + +R + N L V+ ++ + +D I SL ++
Sbjct: 419 QQLLATRGQLEQSNVLLNQYDARVRTLENELSQAGVNLQEQIHQN---DDLIESLKNQI 474
Score = 28.3 bits (60), Expect = 0.73
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 16/106 (15%)
Frame = +3
Query: 252 LEAQLSQAKLIAEESDKKYEEVARK-LVLMEQDLERAEERAE-------QSDCKIVELEE 407
++ + S A+ ++ +K E+ K L L + LER R E Q D K E
Sbjct: 505 IQLKASSAQEAIDKKEKMEREMKNKNLELADMILERDRARHELETMHRSQRD-KQESTER 563
Query: 408 ELRVVGNNLKSLE---VSEEKAMASR-----EHVEDKIHSLSQKLA 521
ELR++ SLE SE + SR H+ED +HS ++LA
Sbjct: 564 ELRLLQEKAASLERNKSSEVSNLLSRYNTEVAHLEDALHSKDRELA 609
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 31.9 bits (69), Expect = 0.060
Identities = 29/118 (24%), Positives = 59/118 (50%)
Frame = +3
Query: 153 AKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLV 332
A L++ Q ++ R K +++ N+ V L+ + S+ + ++ ++ +E+A+K +
Sbjct: 152 ATLADLEQFSNPITRPSKEVDSLENI----VTKLDLE-SEDLMRLKKQEQLDDEIAKKYL 206
Query: 333 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 506
L +Q+ AEE Q IV E+E N+KSLE +++ H+ D + +
Sbjct: 207 LGQQE---AEEPLVQQQTSIVNPEKEEVTKTENIKSLEGELMGTISAELHLFDAVEEV 261
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 30.7 bits (66), Expect = 0.14
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Frame = +3
Query: 150 TAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQ--LSQAKLIAEESDKKYEEVAR 323
TA L E D E ++ L+N++ + AIL + L + K I ++ ++ + +
Sbjct: 261 TASLEEYLNDPDFEENRKQYLQNKSGSPVEETAILNRKPTLRKKKSIPKKQNESSSTI-Q 319
Query: 324 KLVLMEQDLERAEERA-------EQSDCKIVELEEELRVVGNNLKSLEVSEE-KAMASRE 479
K ++Q+ +EE A +++ +I EEE++ + E EE S
Sbjct: 320 KENTVQQEASSSEEEAVKSLPETQRTTSRIETQEEEIKEEEMEGEEEEEEEEVPNYESEN 379
Query: 480 HVEDKIHSLSQKL 518
+EDK+ LS L
Sbjct: 380 ELEDKVGDLSLSL 392
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 30.3 bits (65), Expect = 0.18
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Frame = +3
Query: 153 AKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLV 332
++L E S+ D SE+ EN N +R+A LE+ LS +++ E+ +
Sbjct: 930 SRLFEISKQLDNSEQ-----EN--NKFRERIAELESHLSNYAEAKLAQERELEQTRVLIS 982
Query: 333 LMEQDLERAEERAEQSDCKIVELEEELRVVGN-NLKSLEVS 452
QD E +E E+ + ++ +EEE+R V + N + L V+
Sbjct: 983 DQSQDGE-LKELLEEKENALIMMEEEMRQVNDANTELLRVN 1022
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 29.9 bits (64), Expect = 0.24
Identities = 23/114 (20%), Positives = 53/114 (46%)
Frame = +3
Query: 174 QAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLE 353
+A +++E+IR+ + N D+ E ++ + K +V V++E
Sbjct: 456 RARNDAEKIRQLEKASGNASDEGELNDEEEVISSSNTPSTKAKTTNKVIISDVIIEAT-- 513
Query: 354 RAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 515
+AE + Q + ++V EE+L + ++++SE ++ + + D LS +
Sbjct: 514 QAEPKRRQKNSRVVFDEEDLTGDSHGSSNMKISESDDESNGDMIRDSFDRLSSE 567
>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex subunit
Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1117
Score = 29.1 bits (62), Expect = 0.42
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +3
Query: 240 RVAILEAQLSQAKLIA-EESDKKYEEVARKLVLMEQ--DLERAEERAEQSDCKIVELEEE 410
+V ILE++L L E ++KY E RKL L+E+ DL++ +A +S ++ EL
Sbjct: 870 KVNILESRLLSNPLHNFSELEEKYAEYLRKLALLEEVKDLKKKLSKA-RSIMQLDELNSR 928
Query: 411 LRVV 422
RV+
Sbjct: 929 KRVL 932
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 28.7 bits (61), Expect = 0.56
Identities = 30/164 (18%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Frame = +3
Query: 45 IMRREEA-ESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENR 221
IM+ + A E + + L+R+I+ + +K+SE E A+ +
Sbjct: 298 IMKSKVALELQSSQLSRQIEFSKKDESSKLNILSELESKISEKENELSEILPKYNAIVSE 357
Query: 222 TNMEDDRVAILEAQ----LSQAKLIAEESDKKYEE--VARKLVLMEQDLERAEERAEQSD 383
+ + R+ +L+ Q L + ++ + KK + + +L+ + +++ +E ++
Sbjct: 358 ADDLNKRIMLLKNQKQSLLDKQSRTSQFTTKKERDEWIRNQLLQINRNINSTKENSDYLK 417
Query: 384 CKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 515
+ E+E EL+ + K +E+S E + I S++++
Sbjct: 418 TEYDEMENELKAKLSRKKEIEISLESQGDRMSQLLANITSINER 461
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 28.7 bits (61), Expect = 0.56
Identities = 21/82 (25%), Positives = 34/82 (41%)
Frame = +3
Query: 258 AQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLK 437
A LS K E K Y+E K + D+E + + EQ + + LE L + K
Sbjct: 531 ANLSDVKAKVSEIRKAYDEELAKAKQISLDIETNKAQTEQVNREYSILEATLNALQKQNK 590
Query: 438 SLEVSEEKAMASREHVEDKIHS 503
E+ +A E ++ + S
Sbjct: 591 QKGEVLEQVVAESEAAKNMVES 612
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 28.7 bits (61), Expect = 0.56
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 333 EQACAPPLRISCPTPRR*ASPVTVEPPRWQRDH 235
++A APP+ I CP R+ TV R+QRDH
Sbjct: 1341 QRASAPPIDIYCPGSRQ----FTVLQSRFQRDH 1369
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.3 bits (60), Expect = 0.73
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Frame = +3
Query: 162 SEASQAADESERIRKALENRTNMEDDRVAILEA---QLSQAKLIAEESDKK--YEEVARK 326
S+A ERI+K +EN + + D + + + + L ES K+ EV
Sbjct: 855 SQAEIVGANKERIQKTVENGSQLLDSKSKAIHSNSRSMYDHCLALAESQKQGVNLEVQTL 914
Query: 327 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNN---LKSLEVSEEKAMASREHV 485
L+++ E +E+ ++ ++++L E L VGNN + S++ + +HV
Sbjct: 915 DRLLQKVKEHSEDNTKEKHQQLLDLLESL--VGNNDNLIDSIKTPHTELQKITDHV 968
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.3 bits (60), Expect = 0.73
Identities = 29/166 (17%), Positives = 63/166 (37%), Gaps = 8/166 (4%)
Frame = +3
Query: 3 KDECEEYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAA 182
KD+C Y +L + + E ESE+ + A +
Sbjct: 1038 KDQCRTYESQLASLVSKYSETESELNKKEAELVIFQKEITEYRDQLHKAFQNPEKTHNIN 1097
Query: 183 DESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAE 362
D + EN + ++IL+ L +E+++ E + ++EQ + E
Sbjct: 1098 DVKSGPLNSDENIYSTSSTTLSILKDVQELKSLHTKEANQLSERIKEISEMLEQSIATEE 1157
Query: 363 E-RAEQSD-CKIVEL------EEELRVVGNNLKSLEVSEEKAMASR 476
+ R + S+ C I+E ++E ++ N +L++ + + +
Sbjct: 1158 KLRRKNSELCDIIEALKYQIQDQETEIISLNADNLDLKDTNGVLEK 1203
Score = 27.5 bits (58), Expect = 1.3
Identities = 24/97 (24%), Positives = 39/97 (40%)
Frame = +3
Query: 231 EDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEE 410
+D + L+ QL K +A E E V + + DL+ + A + D +
Sbjct: 841 KDALINNLQNQLESTKEVANELTITKERVLQ----LTNDLQEEQALAHEKDILVERANSR 896
Query: 411 LRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQKLA 521
+ VV L SLE A E + + S+ + LA
Sbjct: 897 VEVVHERLSSLENQVTIADEKYEFLYAEKQSIEEDLA 933
>SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 393 VELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQKL 518
+E EEE + NNLK+L S + +M S +V+ + + S L
Sbjct: 269 IEGEEEGECLFNNLKALIYSPDLSMDSSNYVQSVVQTSSSIL 310
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 26.6 bits (56), Expect = 2.2
Identities = 25/153 (16%), Positives = 64/153 (41%), Gaps = 1/153 (0%)
Frame = +3
Query: 6 DECEEYHKRLQVEIMRREEAE-SEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAA 182
+E + QV+I +A+ E+A L +I+ + L
Sbjct: 122 EEVRNEKEATQVKIHELLDAKWKEIAELKTQIEKNDQALSEKNHEVMVSNQALQMKDTNL 181
Query: 183 DESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAE 362
E++ + + +A E QL + + ++ ++ ++V+ + L + + E+
Sbjct: 182 TNLEKLFADSREQLETKCKELAAAEQQLQELSVHNQQLEESIKQVSSSIELEKINAEQRL 241
Query: 363 ERAEQSDCKIVELEEELRVVGNNLKSLEVSEEK 461
+ +E K + EE + + +N +++E+ +E+
Sbjct: 242 QISELEKLKAAQ-EERIEKLSSNNRNVEILKEE 273
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.6 bits (56), Expect = 2.2
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +3
Query: 303 KYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREH 482
++ E A + V E+D E ++S+ K V+ E E+R + N L L + A
Sbjct: 252 RFLENALEKVQREKDSLSTEMEEDKSN-KEVDYEYEIRQLQNRLDELSEELDVAQDLLTE 310
Query: 483 VEDKIHSLSQKL 518
ED+I +L +++
Sbjct: 311 KEDEIATLKRQI 322
>SPBC16A3.08c |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 284
Score = 26.6 bits (56), Expect = 2.2
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 159 LSEASQAADESERIRKALENRTNME----DDRVAILEAQLSQAKLIAEESDKK 305
LSE AA R + LEN T +E ++ A L+ SQ K A+ES K
Sbjct: 181 LSERKSAAKPVGRTVEKLENATKVEKSAPEELFASLKKSASQKKSAAKESKPK 233
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 291 ESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGN-NLKSLEVSEEKAM 467
+SD K A + V E DL+ AE + + + ++ + V+ N +S+E+A
Sbjct: 36 DSDPKAHRAALRSVTHETDLDEFLNTAELGEVEFIAEKQNVTVIQNPEQNPFLLSKEEAA 95
Query: 468 ASREHVE 488
S++ E
Sbjct: 96 RSKQKQE 102
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 26.2 bits (55), Expect = 3.0
Identities = 13/68 (19%), Positives = 33/68 (48%)
Frame = +3
Query: 285 AEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKA 464
+ ++ KKY+ + +K + +DLE+ + S +L E + +SL+ E+
Sbjct: 1407 SSDTRKKYDSIIKKRDSLREDLEKFRSTGKNSSILEAQLREITKQKNMLEQSLDDMRERQ 1466
Query: 465 MASREHVE 488
++ +++
Sbjct: 1467 RSTNRNLD 1474
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 285 AEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKS 440
A+ +KK+ E R L+ E EQ IV +EE + V K+
Sbjct: 219 AKTWEKKFREALRDSKEYAAQLQTIHEEYEQQQAHIVRMEELIHAVEKERKT 270
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 26.2 bits (55), Expect = 3.0
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 192 ERIRKALENRTNMEDDRV--AILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEE 365
E+ K +N T + +R A +E + S A + + ++ +E AR+L E L+ +E
Sbjct: 839 EQRAKMAKNTTKRQLERAIQAQIEYEKSVAAKLEDARIQREKEKARRLAEEEALLKEKQE 898
Query: 366 RAEQSDCKIVELEEEL 413
R Q + +++EE+
Sbjct: 899 RERQLQEERQKMQEEV 914
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 26.2 bits (55), Expect = 3.0
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +3
Query: 204 KALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEE---RAE 374
K+ E+ + + D V I + S ++L EES++ E K + +++ R
Sbjct: 198 KSTEHDSTL-DSGVVIDGREKSSSELHEEESEQAAEGDTAKNSGTDAQAPLSDDEWLRLH 256
Query: 375 QSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLS 509
++ K + EEE+ VVG+ LKS + R DKI S
Sbjct: 257 RTRIKEKQPEEEVSVVGDELKSFDKENNDEHLERV-TNDKIADAS 300
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 26.2 bits (55), Expect = 3.0
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -3
Query: 462 PSPLRLPEISGCYQRHGAPPQAQRFCNRFVRRVPPPSLG 346
PSP+ LP S Y + PP + + + + P P+ G
Sbjct: 402 PSPMELPSPSTVYHQVFYPPTSTSVSSYGLGKTPQPAYG 440
>SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 25.8 bits (54), Expect = 3.9
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 315 VARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDK 494
V R + E + RAE++ ++L+ L G N+K S +K +R H + K
Sbjct: 72 VERLINRKENGSHQVSNRAERNR---LQLKRSLERAGINIKFAPPSNKKRRLNRTHYDKK 128
Query: 495 IH 500
H
Sbjct: 129 SH 130
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 3.9
Identities = 22/78 (28%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Frame = -3
Query: 483 RARETPSPSPLRLPEISGCYQRHGAPPQAQRFCNRFVRRVPP--PSLGPAP*EQACAPPL 310
R P P+P LP + APP +PP P P P APPL
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPA-APPLPPSAPIAPPLPAGMPAAPPL 469
Query: 309 RISCPTPRR*ASPVTVEP 256
+ P P +P P
Sbjct: 470 PPAAPAPPPAPAPAPAAP 487
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 25.8 bits (54), Expect = 3.9
Identities = 14/68 (20%), Positives = 33/68 (48%)
Frame = +3
Query: 195 RIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAE 374
R+R+ E +T+ EDD + ++S + + + ++ L +E D+E E +
Sbjct: 130 RVREEQEEKTDNEDDN----DVEISTQESLENNGLAEKKDDTSSLATLEDDIEGQEFSFD 185
Query: 375 QSDCKIVE 398
D ++++
Sbjct: 186 DQDLQMLQ 193
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 308 RRGGAQACSYGAGPREGGGTRRTKR 382
+RGG GPR G G+R+ KR
Sbjct: 229 QRGGTLEAPRKGGPRSGVGSRKRKR 253
>SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 25.8 bits (54), Expect = 3.9
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 261 QLSQAKLIAEESDKKYEEVARKLVLMEQDLE---RAEERAEQSDCKIVELEEELRVVGNN 431
+LSQ E+ KKYE+ +KL+ E + E ++ +S+ LEEE
Sbjct: 250 RLSQDAQEEEKQKKKYEQHIKKLLDGESNEEGGGEFQDHGMRSEINEEVLEEEDEEKIAL 309
Query: 432 LKSLEVSEEKAMASREHVEDK 494
LK LE ++ MA+R + K
Sbjct: 310 LKKLE--SKQPMATRFEITSK 328
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 195 ARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSGQPLRTQLL 58
AR H RP R + R + + A G PP+ + SG R + L
Sbjct: 82 ARQHERPFRSRKSRRRKGKKAFSPRPGSPPSPSFYRSGSQKRARNL 127
>SPCC285.08 |ret2||coatomer delta subunit Ret2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 240
Score = 25.4 bits (53), Expect = 5.2
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +3
Query: 264 LSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSL 443
L+Q K E + +EE +++V +++E EER + ++ +E R NL S
Sbjct: 127 LTQIKTYLEM--ESHEEKIQEIVSRNKEIEATEERKRRIKQLELQKKEAARRAAQNLPSA 184
Query: 444 EVSE 455
+ E
Sbjct: 185 DAYE 188
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 25.0 bits (52), Expect = 6.8
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Frame = +3
Query: 171 SQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAE-ESDKKYEEVARKLVLMEQD 347
+++ D SE R +R +DD + E+ ++ +E ES ++ E V + +
Sbjct: 14 AESVDSSEENRLT-SSRLKKQDDSSSEEESSEEESASSSESESSEEESESEESEVEVPKK 72
Query: 348 LERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 515
A +SD + E EEE + + EVS+E S E + S S++
Sbjct: 73 KAVAASEDSESDSESSEEEEET----ESEEDSEVSDESESESESESESEEESESEE 124
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 297 DKKYEEVARKLVLMEQDLERAEERAEQSDCK 389
D+K +V++ L + D+E A+E E++D +
Sbjct: 4093 DEKEGDVSKDSDLEDMDMEAADENKEEADAE 4123
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.0 bits (52), Expect = 6.8
Identities = 23/97 (23%), Positives = 46/97 (47%)
Frame = +3
Query: 192 ERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERA 371
+++ + +E R + E +R + + A+ I E +D+K E++ + ++ + E
Sbjct: 457 QQMTREMEERVS-EVERTFLTKLLEESAQGI-EYTDQKLEKMGGWMKKLQDENSEKTETI 514
Query: 372 EQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREH 482
Q + I EL EELR +L+ + E A E+
Sbjct: 515 AQLEQIIEELHEELR----SLEEESIKESSATQQNEN 547
>SPAC4F10.09c |||ribosome biogenesis protein Noc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 25.0 bits (52), Expect = 6.8
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +3
Query: 231 EDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEE 410
ED+ L Q ++ EESD EE+ + + M D +E+ A+++D + + EE+
Sbjct: 723 EDEVWKALVDSKPQLEMDEEESDFDSEEMDKAMTDMGSD---SEQSADENDNESMASEEK 779
Query: 411 -LRVVGNNLKSLEVSEEKAMASREHVEDK 494
+ NL + SE++ + + ED+
Sbjct: 780 PMFSDEENLSEIAHSEDEFDDTVDFFEDE 808
>SPCC5E4.10c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 101
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +3
Query: 378 SDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 515
S+ K E + R KS ++ M R H K+H SQK
Sbjct: 48 SNRKTKNPESDRRRQSRKKKSTQIQASDEMKHRRHHVHKVHHYSQK 93
>SPAC664.03 |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 457
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 396 ELEEELRVVGNNLKSLEVSEEKAMASREHVE 488
E EE+LR V +L EEK SRE +E
Sbjct: 378 EEEEKLRSVEGSLNEELSEEEKPAESREQLE 408
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 276 SPVTVEPPRWQRDHPPCWCGSPAPCVFARIHRRPG 172
SP + PP + + HPP + AP + R+ PG
Sbjct: 146 SPTSPHPPSFVQPHPPYGIFA-APILDVRVLTNPG 179
>SPAPB2B4.03 |cig2|cyc17|cyclin Cig2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 411
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 228 MEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVL 335
++ DRV+ ++ LS L+AEE + E RKL L
Sbjct: 114 LQKDRVSNVDDHLSSNPLMAEEYAPEIFEYIRKLDL 149
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 399 LEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQKL 518
LE+E + + LKSLE ++ E + ++ L+ KL
Sbjct: 897 LEQESAQLNSGLKSLEAEKQLLHTENEELHIRLDKLTGKL 936
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,827,797
Number of Sequences: 5004
Number of extensions: 35885
Number of successful extensions: 211
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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