Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS318H05f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   1.9  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   4.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   4.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   4.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.8  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   7.7  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/60 (23%), Positives = 25/60 (41%)
 Frame = -2

Query: 367 YVIVISNERFSAVNIR*VLDRWGFHCCRLGVQSTFT*KRCVVTNNNSRCRDV*ASEAVID 188
           Y++ +SN     VN     D   F      V +     RC  +NN +  ++   ++A +D
Sbjct: 378 YMLALSNRMQKIVNNDFNFDEVNFRILGANVNNLIKNTRCAKSNNQNNNQNKYKNQAHLD 437


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 288 QQWKPQRSKTHRIFTA 335
           ++W+P RS+   IFT+
Sbjct: 126 ERWRPLRSRLSPIFTS 141


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 223 IYCYCLLLHNVFM*RCSELR 282
           +Y + L LHN+    CS+L+
Sbjct: 337 VYAFALALHNLQKDVCSKLK 356


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 223 IYCYCLLLHNVFM*RCSELR 282
           +Y + L LHN+    CS+L+
Sbjct: 427 VYAFALALHNLQKDVCSKLK 446


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 108  PALNFGGIWLFY 73
            P L +G +WLF+
Sbjct: 995  PDLEYGKVWLFF 1006


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 13/51 (25%), Positives = 19/51 (37%)
 Frame = -2

Query: 367 YVIVISNERFSAVNIR*VLDRWGFHCCRLGVQSTFT*KRCVVTNNNSRCRD 215
           Y++V+SN     VN     D   F      V+       CV  N N   ++
Sbjct: 375 YMLVLSNRMQKIVNDDFNFDDVNFRILGANVKELIRNTHCVNNNQNDNIQN 425


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,185
Number of Sequences: 438
Number of extensions: 3192
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)