Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS318H04f
         (414 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130411-1|AAI30412.1| 1250|Homo sapiens REV1 homolog (S. cerevi...    31   2.0  
BC037734-1|AAH37734.1| 1114|Homo sapiens REV1 protein protein.         31   2.0  
AY919043-1|AAW82434.1|  422|Homo sapiens truncated REV1-like (ye...    31   2.0  
AK002087-1|BAA92079.1|  392|Homo sapiens protein ( Homo sapiens ...    31   2.0  
AF357886-1|AAK43708.1| 1251|Homo sapiens terminal deoxycytidyl t...    31   2.0  
AF206019-1|AAF18986.1| 1251|Homo sapiens REV1 protein protein.         31   2.0  
AF151538-1|AAF06731.1| 1251|Homo sapiens deoxycytidyl transferas...    31   2.0  
AC018690-2|AAY24314.1| 1251|Homo sapiens unknown protein.              31   2.0  
AB047646-1|BAB21441.1| 1250|Homo sapiens Rev1S protein.                31   2.0  

>BC130411-1|AAI30412.1| 1250|Homo sapiens REV1 homolog (S.
           cerevisiae) protein.
          Length = 1250

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 213 DCTFLSNYCF*SEIHNLLRWACE 145
           DC F+SN+   S +H++  W CE
Sbjct: 345 DCNFISNFYSHSRLHHISMWKCE 367


>BC037734-1|AAH37734.1| 1114|Homo sapiens REV1 protein protein.
          Length = 1114

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 213 DCTFLSNYCF*SEIHNLLRWACE 145
           DC F+SN+   S +H++  W CE
Sbjct: 274 DCNFISNFYSHSRLHHISMWKCE 296


>AY919043-1|AAW82434.1|  422|Homo sapiens truncated REV1-like
           (yeast) protein.
          Length = 422

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 213 DCTFLSNYCF*SEIHNLLRWACE 145
           DC F+SN+   S +H++  W CE
Sbjct: 345 DCNFISNFYSHSRLHHISMWKCE 367


>AK002087-1|BAA92079.1|  392|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11225 fis, clone PLACE1008275, weakly similar to
           DNA REPAIR PROTEIN REV1 (EC 2.7.7.-). ).
          Length = 392

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 213 DCTFLSNYCF*SEIHNLLRWACE 145
           DC F+SN+   S +H++  W CE
Sbjct: 324 DCNFISNFYSHSRLHHISMWKCE 346


>AF357886-1|AAK43708.1| 1251|Homo sapiens terminal deoxycytidyl
           transferase protein.
          Length = 1251

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 213 DCTFLSNYCF*SEIHNLLRWACE 145
           DC F+SN+   S +H++  W CE
Sbjct: 345 DCNFISNFYSHSRLHHISMWKCE 367


>AF206019-1|AAF18986.1| 1251|Homo sapiens REV1 protein protein.
          Length = 1251

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 213 DCTFLSNYCF*SEIHNLLRWACE 145
           DC F+SN+   S +H++  W CE
Sbjct: 345 DCNFISNFYSHSRLHHISMWKCE 367


>AF151538-1|AAF06731.1| 1251|Homo sapiens deoxycytidyl transferase
           protein.
          Length = 1251

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 213 DCTFLSNYCF*SEIHNLLRWACE 145
           DC F+SN+   S +H++  W CE
Sbjct: 345 DCNFISNFYSHSRLHHISMWKCE 367


>AC018690-2|AAY24314.1| 1251|Homo sapiens unknown protein.
          Length = 1251

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 213 DCTFLSNYCF*SEIHNLLRWACE 145
           DC F+SN+   S +H++  W CE
Sbjct: 345 DCNFISNFYSHSRLHHISMWKCE 367


>AB047646-1|BAB21441.1| 1250|Homo sapiens Rev1S protein.
          Length = 1250

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 213 DCTFLSNYCF*SEIHNLLRWACE 145
           DC F+SN+   S +H++  W CE
Sbjct: 345 DCNFISNFYSHSRLHHISMWKCE 367


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,711,726
Number of Sequences: 237096
Number of extensions: 1105194
Number of successful extensions: 1359
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)