Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS318H04f
(414 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 26 0.19
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 25 0.26
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 25 0.45
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 1.4
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 2.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 2.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 2.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 2.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 2.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 2.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 2.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 2.4
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 5.5
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 5.5
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 5.5
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 5.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 20 9.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 20 9.6
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 25.8 bits (54), Expect = 0.19
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 240 SETFQNICVDCTFLSNYCF*SEIH 169
S +Q C +CT+ + YC ++H
Sbjct: 40 SNVYQYRCANCTYATKYCHSLKLH 63
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 25.4 bits (53), Expect = 0.26
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Frame = +1
Query: 1 RFGNDF---SINRATLYLYFRDSFGTSCIYVHTEKNKFIYYS 117
RF DF L Y R T CI+V +E F+Y S
Sbjct: 43 RFSKDFYRQDTKNNLLNAYVRFKLVTDCIFVTSEPGYFLYTS 84
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 24.6 bits (51), Expect = 0.45
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 97 FFLYVHIYRMFRKNHESTDTRLLCLLRN-HFRT 2
F Y + R F+ HE +DT +C N +RT
Sbjct: 15 FSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRT 47
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 23.0 bits (47), Expect = 1.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 165 LLRWACEPLILYVEHHRIVYKFV 97
+L W EP+IL E H YK V
Sbjct: 171 VLYWDQEPIILADELHLTEYKLV 193
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 165 NYEFHSRNNSLKGMYNPHKYFE 230
NY +++ NN+ K +Y Y E
Sbjct: 88 NYNYNNYNNNYKPLYYNINYIE 109
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 165 NYEFHSRNNSLKGMYNPHKYFE 230
NY +++ NN+ K +Y Y E
Sbjct: 88 NYNYNNYNNNYKPLYYNINYIE 109
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 165 NYEFHSRNNSLKGMYNPHKYFE 230
NY +++ NN+ K +Y Y E
Sbjct: 88 NYNYNNYNNNYKPLYYNINYIE 109
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 165 NYEFHSRNNSLKGMYNPHKYFE 230
NY +++ NN+ K +Y Y E
Sbjct: 88 NYNYNNYNNNYKPLYYNINYIE 109
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 165 NYEFHSRNNSLKGMYNPHKYFE 230
NY +++ NN+ K +Y Y E
Sbjct: 321 NYNYNNYNNNYKPLYYNINYIE 342
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 165 NYEFHSRNNSLKGMYNPHKYFE 230
NY +++ NN+ K +Y Y E
Sbjct: 321 NYNYNNYNNNYKPLYYNINYIE 342
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 165 NYEFHSRNNSLKGMYNPHKYFE 230
NY +++ NN+ K +Y Y E
Sbjct: 321 NYNYNNYNNNYKPLYYNINYIE 342
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 165 NYEFHSRNNSLKGMYNPHKYFE 230
NY +++ NN+ K +Y Y E
Sbjct: 310 NYNYNNYNNNYKPLYYNINYIE 331
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 5.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 129 RIRSMARMPTLINYEFHSRNNSLKGMYNPHKYFE 230
R R + +L+N H+ NN K Y Y E
Sbjct: 297 RSREPKIISSLLNNTIHNNNNYKKLQYYNINYIE 330
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 5.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 129 RIRSMARMPTLINYEFHSRNNSLKGMYNPHKYFE 230
R R + +L+N H+ NN K Y Y E
Sbjct: 308 RSREPKIISSLLNNTIHNNNNYKKLQYYNINYIE 341
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 5.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 129 RIRSMARMPTLINYEFHSRNNSLKGMYNPHKYFE 230
R R + +L+N H+ NN K Y Y E
Sbjct: 308 RSREPKIISSLLNNTIHNNNNYKKLQYYNINYIE 341
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 5.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 129 RIRSMARMPTLINYEFHSRNNSLKGMYNPHKYFE 230
R R + +L+N H+ NN K Y Y E
Sbjct: 297 RSREPKIISSLLNNTIHNNNNYKKLQYYNINYIE 330
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.2 bits (40), Expect = 9.6
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +3
Query: 165 NYEFHSRNNSLKGMY 209
NY +++ NN+ K +Y
Sbjct: 321 NYNYNNYNNNYKPLY 335
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 9.6
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +3
Query: 165 NYEFHSRNNSLKGMYNPHKYFE 230
NY +++ NN+ K ++ Y E
Sbjct: 321 NYNYNNYNNNYKPLHYNINYIE 342
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,875
Number of Sequences: 438
Number of extensions: 2654
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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