Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS318H03f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC066551-1|AAH66551.1|   96|Homo sapiens TMEM83 protein protein.       33   0.46 
AB023144-1|BAA76771.2| 1001|Homo sapiens KIAA0927 protein protein.     31   2.4  
AB065580-1|BAC05810.1|  346|Homo sapiens seven transmembrane hel...    30   4.3  
AK128797-1|BAC87611.1|  201|Homo sapiens protein ( Homo sapiens ...    30   5.7  

>BC066551-1|AAH66551.1|   96|Homo sapiens TMEM83 protein protein.
          Length = 96

 Score = 33.5 bits (73), Expect = 0.46
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 124 LDPFYLLHICKASVFSFSVCLSTTYHIFYAICICVCAQLII 246
           L P   L IC + +   SVC+S T ++   +C+C+   LI+
Sbjct: 29  LPPSLSLSICVSLLLHISVCVSFTPYLSVCVCLCLSLSLIL 69


>AB023144-1|BAA76771.2| 1001|Homo sapiens KIAA0927 protein protein.
          Length = 1001

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -2

Query: 514 FPLTTI*RPTSAAPTPRFTPFSSGAAPRANT 422
           FP     RP S AP+P   P +SG+AP A T
Sbjct: 22  FPFLAHRRPPSPAPSPSARPTASGSAPPAAT 52


>AB065580-1|BAC05810.1|  346|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 346

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 148 ICKASVFSFSVCLSTTYHIFYAICICVC 231
           +C     S  VC+     +F  +CICVC
Sbjct: 29  VCVCICVSVCVCICVCVSVFVCVCICVC 56


>AK128797-1|BAC87611.1|  201|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45585 fis, clone BRTHA3013882. ).
          Length = 201

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +1

Query: 142 LHICKASVFSFSVCLSTTYHIFYAICICVCAQLIIF 249
           LH+C       SVC   +  +   +C+C+C  + ++
Sbjct: 111 LHLCVCVGLCVSVCFCVSVCVCLCVCVCICVFVCVW 146


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,055,094
Number of Sequences: 237096
Number of extensions: 1046663
Number of successful extensions: 1651
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1618
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)