Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS318G12f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   1.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   1.1  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    24   1.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   1.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.5  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   3.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   3.3  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   4.4  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               21   7.7  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = -3

Query: 498 GLFGGQTSTWRQTRYV-LLHQ 439
           G+FGG   +WR+ R    LHQ
Sbjct: 166 GVFGGSAWSWREERQAYYLHQ 186


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = -3

Query: 498 GLFGGQTSTWRQTRYV-LLHQ 439
           G+FGG   +WR+ R    LHQ
Sbjct: 166 GVFGGSAWSWREERQAYYLHQ 186


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 334 PSAPRGSVWVPPGTPP 287
           P + RG V  PPG PP
Sbjct: 42  PRSNRGPVLFPPGPPP 57


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 343 PCQPSAPRGSVWVP 302
           PC PS PRG   VP
Sbjct: 393 PCTPSPPRGPGGVP 406


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 394 GCEEDCEEFSWVLKQLMQEN 453
           GCE  CE++   LK L  E+
Sbjct: 287 GCEVICEDYQAFLKHLNTEH 306



 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 346 APCQPSAPRGSVWVPPGTPP 287
           AP + S P  S   PPG PP
Sbjct: 33  APQRGSPPNPSQGPPPGGPP 52


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 188 ILYCSSLMTLWLSP 229
           +L   +LMTLWL P
Sbjct: 256 VLMTMTLMTLWLEP 269


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 258 LIKAGINDLIGDSHKVISELQ*RMHICTQCIITH 157
           LIKA I+    D H    E+  ++H+   CI  H
Sbjct: 73  LIKAIIDS---DRHSTTREIAEKLHVSHTCIENH 103


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = +2

Query: 101 DQKQKMNSWYWRVMEFGM 154
           ++ +K+++ YW  +EFG+
Sbjct: 369 EEIEKLSTIYWFTVEFGL 386


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +1

Query: 343 ELDETLRQRVTALIESRGCEEDC 411
           ++D  L      ++  RGC E C
Sbjct: 37  DIDSLLEDESERMLRKRGCIEAC 59


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,878
Number of Sequences: 438
Number of extensions: 2711
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)