Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS318G08f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC041142-1|AAH41142.1| 631|Homo sapiens XPR1 protein protein. 29 7.5
AL590085-2|CAH70457.1| 631|Homo sapiens xenotropic and polytrop... 29 7.5
AL590085-1|CAH70458.1| 696|Homo sapiens xenotropic and polytrop... 29 7.5
AL358434-2|CAH74114.1| 631|Homo sapiens xenotropic and polytrop... 29 7.5
AL358434-1|CAH74113.1| 696|Homo sapiens xenotropic and polytrop... 29 7.5
AL162431-3|CAH74089.1| 631|Homo sapiens xenotropic and polytrop... 29 7.5
AL162431-2|CAH74090.1| 696|Homo sapiens xenotropic and polytrop... 29 7.5
AF115389-1|AAD17211.1| 696|Homo sapiens SYG1 protein protein. 29 7.5
AF099082-1|AAD08928.1| 696|Homo sapiens xenotropic and polytrop... 29 7.5
AF089744-1|AAD10196.1| 696|Homo sapiens xenotropic and polytrop... 29 7.5
>BC041142-1|AAH41142.1| 631|Homo sapiens XPR1 protein protein.
Length = 631
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = -3
Query: 498 HIYHIMSKGFNKFYIFSVISTKFY------ITILF*YFFSTFLKYRYVISRHVKAIFNYS 337
++Y + GF F++ + T +Y + +LF F + F K + + + S
Sbjct: 345 YVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLS 404
Query: 336 LHLLNLF*YIICK*KMQLRWDKYRVL 259
+ L++L Y+IC ++L+WD+ + L
Sbjct: 405 VILMDLE-YMICFYSLELKWDESKGL 429
>AL590085-2|CAH70457.1| 631|Homo sapiens xenotropic and polytropic
retrovirus receptor protein.
Length = 631
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = -3
Query: 498 HIYHIMSKGFNKFYIFSVISTKFY------ITILF*YFFSTFLKYRYVISRHVKAIFNYS 337
++Y + GF F++ + T +Y + +LF F + F K + + + S
Sbjct: 345 YVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLS 404
Query: 336 LHLLNLF*YIICK*KMQLRWDKYRVL 259
+ L++L Y+IC ++L+WD+ + L
Sbjct: 405 VILMDLE-YMICFYSLELKWDESKGL 429
>AL590085-1|CAH70458.1| 696|Homo sapiens xenotropic and polytropic
retrovirus receptor protein.
Length = 696
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = -3
Query: 498 HIYHIMSKGFNKFYIFSVISTKFY------ITILF*YFFSTFLKYRYVISRHVKAIFNYS 337
++Y + GF F++ + T +Y + +LF F + F K + + + S
Sbjct: 345 YVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLS 404
Query: 336 LHLLNLF*YIICK*KMQLRWDKYRVL 259
+ L++L Y+IC ++L+WD+ + L
Sbjct: 405 VILMDLE-YMICFYSLELKWDESKGL 429
>AL358434-2|CAH74114.1| 631|Homo sapiens xenotropic and polytropic
retrovirus receptor protein.
Length = 631
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = -3
Query: 498 HIYHIMSKGFNKFYIFSVISTKFY------ITILF*YFFSTFLKYRYVISRHVKAIFNYS 337
++Y + GF F++ + T +Y + +LF F + F K + + + S
Sbjct: 345 YVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLS 404
Query: 336 LHLLNLF*YIICK*KMQLRWDKYRVL 259
+ L++L Y+IC ++L+WD+ + L
Sbjct: 405 VILMDLE-YMICFYSLELKWDESKGL 429
>AL358434-1|CAH74113.1| 696|Homo sapiens xenotropic and polytropic
retrovirus receptor protein.
Length = 696
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = -3
Query: 498 HIYHIMSKGFNKFYIFSVISTKFY------ITILF*YFFSTFLKYRYVISRHVKAIFNYS 337
++Y + GF F++ + T +Y + +LF F + F K + + + S
Sbjct: 345 YVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLS 404
Query: 336 LHLLNLF*YIICK*KMQLRWDKYRVL 259
+ L++L Y+IC ++L+WD+ + L
Sbjct: 405 VILMDLE-YMICFYSLELKWDESKGL 429
>AL162431-3|CAH74089.1| 631|Homo sapiens xenotropic and polytropic
retrovirus receptor protein.
Length = 631
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = -3
Query: 498 HIYHIMSKGFNKFYIFSVISTKFY------ITILF*YFFSTFLKYRYVISRHVKAIFNYS 337
++Y + GF F++ + T +Y + +LF F + F K + + + S
Sbjct: 345 YVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLS 404
Query: 336 LHLLNLF*YIICK*KMQLRWDKYRVL 259
+ L++L Y+IC ++L+WD+ + L
Sbjct: 405 VILMDLE-YMICFYSLELKWDESKGL 429
>AL162431-2|CAH74090.1| 696|Homo sapiens xenotropic and polytropic
retrovirus receptor protein.
Length = 696
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = -3
Query: 498 HIYHIMSKGFNKFYIFSVISTKFY------ITILF*YFFSTFLKYRYVISRHVKAIFNYS 337
++Y + GF F++ + T +Y + +LF F + F K + + + S
Sbjct: 345 YVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLS 404
Query: 336 LHLLNLF*YIICK*KMQLRWDKYRVL 259
+ L++L Y+IC ++L+WD+ + L
Sbjct: 405 VILMDLE-YMICFYSLELKWDESKGL 429
>AF115389-1|AAD17211.1| 696|Homo sapiens SYG1 protein protein.
Length = 696
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = -3
Query: 498 HIYHIMSKGFNKFYIFSVISTKFY------ITILF*YFFSTFLKYRYVISRHVKAIFNYS 337
++Y + GF F++ + T +Y + +LF F + F K + + + S
Sbjct: 345 YVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLS 404
Query: 336 LHLLNLF*YIICK*KMQLRWDKYRVL 259
+ L++L Y+IC ++L+WD+ + L
Sbjct: 405 VILMDLE-YMICFYSLELKWDESKGL 429
>AF099082-1|AAD08928.1| 696|Homo sapiens xenotropic and polytropic
murine retrovirus receptor protein.
Length = 696
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = -3
Query: 498 HIYHIMSKGFNKFYIFSVISTKFY------ITILF*YFFSTFLKYRYVISRHVKAIFNYS 337
++Y + GF F++ + T +Y + +LF F + F K + + + S
Sbjct: 345 YVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLS 404
Query: 336 LHLLNLF*YIICK*KMQLRWDKYRVL 259
+ L++L Y+IC ++L+WD+ + L
Sbjct: 405 VILMDLE-YMICFYSLELKWDESKGL 429
>AF089744-1|AAD10196.1| 696|Homo sapiens xenotropic and polytropic
murine leukemia virus receptor X3 protein.
Length = 696
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = -3
Query: 498 HIYHIMSKGFNKFYIFSVISTKFY------ITILF*YFFSTFLKYRYVISRHVKAIFNYS 337
++Y + GF F++ + T +Y + +LF F + F K + + + S
Sbjct: 345 YVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLS 404
Query: 336 LHLLNLF*YIICK*KMQLRWDKYRVL 259
+ L++L Y+IC ++L+WD+ + L
Sbjct: 405 VILMDLE-YMICFYSLELKWDESKGL 429
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,321,961
Number of Sequences: 237096
Number of extensions: 1071906
Number of successful extensions: 1249
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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