Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS318G02f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29960-1|AAA36761.1|  603|Homo sapiens protein ( Human steroid r...    30   5.7  
M29959-1|AAA36762.1|  467|Homo sapiens protein ( Human steroid r...    30   5.7  
M21985-1|AAA36650.1|  483|Homo sapiens protein ( Human steroid r...    30   5.7  
BC040141-1|AAH40141.1|  467|Homo sapiens nuclear receptor subfam...    30   5.7  
BC111698-1|AAI11699.1|  607|Homo sapiens SGSM1 protein protein.        29   7.5  
AB275761-1|BAF63511.1| 1093|Homo sapiens small G protein signali...    29   7.5  
AB075821-1|BAB85527.1| 1233|Homo sapiens KIAA1941 protein protein.     29   7.5  

>M29960-1|AAA36761.1|  603|Homo sapiens protein ( Human steroid
           receptor (TR2-11) mRNA, complete cds. ).
          Length = 603

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +2

Query: 50  KNVQYRCRHSRTD--NSHNKTRCQYSR 124
           KN+ Y CR S+    N H++ RCQY R
Sbjct: 143 KNLVYSCRGSKDCIINKHHRNRCQYCR 169


>M29959-1|AAA36762.1|  467|Homo sapiens protein ( Human steroid
           receptor (TR2-9) mRNA, complete cds. ).
          Length = 467

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +2

Query: 50  KNVQYRCRHSRTD--NSHNKTRCQYSR 124
           KN+ Y CR S+    N H++ RCQY R
Sbjct: 143 KNLVYSCRGSKDCIINKHHRNRCQYCR 169


>M21985-1|AAA36650.1|  483|Homo sapiens protein ( Human steroid
           receptor TR2 mRNA, complete cds. ).
          Length = 483

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +2

Query: 50  KNVQYRCRHSRTD--NSHNKTRCQYSR 124
           KN+ Y CR S+    N H++ RCQY R
Sbjct: 143 KNLVYSCRGSKDCIINKHHRNRCQYCR 169


>BC040141-1|AAH40141.1|  467|Homo sapiens nuclear receptor subfamily
           2, group C, member 1 protein.
          Length = 467

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +2

Query: 50  KNVQYRCRHSRTD--NSHNKTRCQYSR 124
           KN+ Y CR S+    N H++ RCQY R
Sbjct: 143 KNLVYSCRGSKDCIINKHHRNRCQYCR 169


>BC111698-1|AAI11699.1|  607|Homo sapiens SGSM1 protein protein.
          Length = 607

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 356 HQSLHHYEGEVSKHSIPWLSTPDSI 430
           H S H++   +S+HS P LST DS+
Sbjct: 228 HPSSHNFSSGLSEHSEPSLSTEDSV 252


>AB275761-1|BAF63511.1| 1093|Homo sapiens small G protein signaling
           modulator 1 protein protein.
          Length = 1093

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 356 HQSLHHYEGEVSKHSIPWLSTPDSI 430
           H S H++   +S+HS P LST DS+
Sbjct: 714 HPSSHNFSSGLSEHSEPSLSTEDSV 738


>AB075821-1|BAB85527.1| 1233|Homo sapiens KIAA1941 protein protein.
          Length = 1233

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 356 HQSLHHYEGEVSKHSIPWLSTPDSI 430
           H S H++   +S+HS P LST DS+
Sbjct: 854 HPSSHNFSSGLSEHSEPSLSTEDSV 878


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,507,581
Number of Sequences: 237096
Number of extensions: 1244444
Number of successful extensions: 2784
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2784
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)