Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS318G02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   2.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.5  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   7.7  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   7.7  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   7.7  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   7.7  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   7.7  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   7.7  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   7.7  

>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +1

Query: 142 LASFFYIVIEFCNVRALMLNMILIITVYKVRNRNNCSINIMFTYNILLQI 291
           L  F YI+     +RA  +N IL I    +++   C I++  T+   +++
Sbjct: 5   LVIFVYILSVAVIIRANGINEILKIMAVSMKDIRYCIIHMGLTFKDFIKM 54


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +2

Query: 467 FLKVNSLESEEQQERHHK 520
           F++ +SL  ++QQ++HH+
Sbjct: 91  FMQQHSLYLQQQQQQHHQ 108


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 35  SFNRPKNVQYRCRHSRTDNSHNK 103
           S +R +N +YR ++ R +  HN+
Sbjct: 3   SCSRDRNREYREKNRRYEKLHNE 25


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 35  SFNRPKNVQYRCRHSRTDNSHNK 103
           S +R +N +YR ++ R +  HN+
Sbjct: 3   SCSRDRNREYREKNRRYEKLHNE 25


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 35  SFNRPKNVQYRCRHSRTDNSHNK 103
           S +R +N +YR ++ R +  HN+
Sbjct: 3   SCSRDRNREYREKNRRYEKLHNE 25


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 35  SFNRPKNVQYRCRHSRTDNSHNK 103
           S +R +N +YR ++ R +  HN+
Sbjct: 3   SCSRDRNREYREKNRRYEKLHNE 25


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 35  SFNRPKNVQYRCRHSRTDNSHNK 103
           S +R +N +YR ++ R +  HN+
Sbjct: 3   SCSRDRNREYREKNRRYEKLHNE 25


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 35  SFNRPKNVQYRCRHSRTDNSHNK 103
           S +R +N +YR ++ R +  HN+
Sbjct: 3   SCSRDRNREYREKNRRYEKLHNE 25


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 35  SFNRPKNVQYRCRHSRTDNSHNK 103
           S +R +N +YR ++ R +  HN+
Sbjct: 3   SCSRDRNREYREKNRRYEKLHNE 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,537
Number of Sequences: 438
Number of extensions: 2776
Number of successful extensions: 31
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)