Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS318F10f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118385-1|AAM48414.1|  343|Drosophila melanogaster RE29502p pro...    35   0.058
AY115552-1|AAM66764.1|  330|Drosophila melanogaster VADER protein.     35   0.058
AE014298-2745|AAF48864.2|  343|Drosophila melanogaster CG6531-PA...    35   0.058
AB085747-1|BAC01264.1|  343|Drosophila melanogaster TNFR superfa...    35   0.058
BT003783-1|AAO41464.1|  994|Drosophila melanogaster LP02833p pro...    28   6.7  
AE014297-1651|AAF54925.1|  988|Drosophila melanogaster CG8773-PA...    28   6.7  

>AY118385-1|AAM48414.1|  343|Drosophila melanogaster RE29502p
           protein.
          Length = 343

 Score = 35.1 bits (77), Expect = 0.058
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -2

Query: 427 DLQTTSLTLAASGCXXXXXXXXVMSLYHAKQWKVIKRALKSDVQDLTAKL 278
           D QT  L +A   C         + ++H +QW+ ++R L  DV++L+ KL
Sbjct: 197 DWQTGVLYVAVLTCLVFFSVAACILIHHMRQWRRMERRLDQDVEELSTKL 246


>AY115552-1|AAM66764.1|  330|Drosophila melanogaster VADER protein.
          Length = 330

 Score = 35.1 bits (77), Expect = 0.058
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -2

Query: 427 DLQTTSLTLAASGCXXXXXXXXVMSLYHAKQWKVIKRALKSDVQDLTAKL 278
           D QT  L +A   C         + ++H +QW+ ++R L  DV++L+ KL
Sbjct: 184 DWQTGVLYVAVLTCLVFFSVAACILIHHMRQWRRMERRLDQDVEELSTKL 233


>AE014298-2745|AAF48864.2|  343|Drosophila melanogaster CG6531-PA
           protein.
          Length = 343

 Score = 35.1 bits (77), Expect = 0.058
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -2

Query: 427 DLQTTSLTLAASGCXXXXXXXXVMSLYHAKQWKVIKRALKSDVQDLTAKL 278
           D QT  L +A   C         + ++H +QW+ ++R L  DV++L+ KL
Sbjct: 197 DWQTGVLYVAVLTCLVFFSVAACILIHHMRQWRRMERRLDQDVEELSTKL 246


>AB085747-1|BAC01264.1|  343|Drosophila melanogaster TNFR
           superfamily protein Wengen protein.
          Length = 343

 Score = 35.1 bits (77), Expect = 0.058
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -2

Query: 427 DLQTTSLTLAASGCXXXXXXXXVMSLYHAKQWKVIKRALKSDVQDLTAKL 278
           D QT  L +A   C         + ++H +QW+ ++R L  DV++L+ KL
Sbjct: 197 DWQTGVLYVAVLTCLVFFSVAACILIHHMRQWRRMERRLDQDVEELSTKL 246


>BT003783-1|AAO41464.1|  994|Drosophila melanogaster LP02833p
           protein.
          Length = 994

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -2

Query: 328 VIKRALKSDVQDLTAKLKLMESGGDAPAEPVVTT 227
           V K  LKSD++D   KL L+E+G  + A P   +
Sbjct: 28  VQKANLKSDLRDAQEKLDLLEAGYTSTAAPTTAS 61


>AE014297-1651|AAF54925.1|  988|Drosophila melanogaster CG8773-PA
           protein.
          Length = 988

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -2

Query: 328 VIKRALKSDVQDLTAKLKLMESGGDAPAEPVVTT 227
           V K  LKSD++D   KL L+E+G  + A P   +
Sbjct: 28  VQKANLKSDLRDAQEKLDLLEAGYTSTAAPTTAS 61


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,704,259
Number of Sequences: 53049
Number of extensions: 388144
Number of successful extensions: 880
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)