Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS318F09f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 34 0.060
03_02_0137 + 5832608-5833590,5833680-5833731,5833827-5833904,583... 31 0.56
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305... 30 1.3
07_03_0460 + 18425464-18427473 29 2.3
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 29 2.3
04_04_1268 - 32262994-32263017,32263411-32263488,32263653-322638... 29 2.3
01_04_0054 - 15456668-15459691 29 2.3
11_06_0682 - 26253319-26253575,26254009-26254114 29 3.0
08_02_1243 - 25527523-25527960,25527993-25528604 29 3.0
05_01_0334 - 2642998-2643063,2643125-2643169,2643552-2643617,264... 29 3.0
03_03_0090 + 14367033-14367279,14367402-14368205,14368314-143700... 29 3.0
03_02_0613 - 9848514-9848539,9848942-9849200,9849326-9849365,984... 29 3.0
02_02_0662 - 12736904-12737214,12737632-12737914 29 3.0
04_04_0440 - 25219961-25221529 28 4.0
02_05_0750 - 31479876-31480985 28 4.0
01_06_0906 + 32886693-32886919,32887589-32887708,32887978-328881... 28 4.0
12_01_0724 - 6377023-6379392 28 5.2
04_04_1351 - 32827136-32827984 28 5.2
08_01_0985 - 9960064-9960249,9960327-9960419,9960518-9960578,996... 27 6.9
07_03_0961 - 22921761-22921850,22922204-22922338,22922409-229225... 27 6.9
07_01_0483 + 3633010-3633203,3633652-3633957,3634598-3634821,363... 27 6.9
11_06_0536 + 24750533-24750818,24752950-24753018,24753214-24753239 27 9.1
11_06_0105 - 20173014-20173160,20173365-20173431,20173690-20173766 27 9.1
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 27 9.1
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 27 9.1
07_03_0839 + 21916842-21917852,21917944-21919602 27 9.1
02_01_0035 - 220036-221419,222050-222801 27 9.1
>03_06_0353 -
33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 34.3 bits (75), Expect = 0.060
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -1
Query: 359 HGPWDAAYAATRHRRETEPQELAQEMAYNAYH*TENTNQNHRSSIPKPSATDA 201
H P AA AA H+++ + Q + +AYH N HR+++P P+A A
Sbjct: 67 HNP--AALAAYHHQQQQQYHHHQQLLHSSAYHQNPTHNLQHRAAVPAPAAPAA 117
>03_02_0137 +
5832608-5833590,5833680-5833731,5833827-5833904,
5835228-5835347,5835618-5835716,5835821-5835975,
5836117-5836257,5836395-5836503
Length = 578
Score = 31.1 bits (67), Expect = 0.56
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = -2
Query: 361 PTVLGTPPTQQPATGGRLNPRSSPKKWHTTLTIRPKTRTKTIDLPSRNRPQLTL*KNSVS 182
P +LG+PP +PA +P ++ K + + R K T P R R L K +
Sbjct: 86 PNILGSPPPSKPAK----SPTTASKSASASASARKKISTPAPPPPPRERRFLVAKKRARR 141
Query: 181 TANGA 167
NGA
Sbjct: 142 RRNGA 146
>08_02_1291 +
25930056-25930067,25930289-25930334,25930434-25930546,
25930645-25930930,25931357-25931421,25931642-25931693,
25931774-25931883,25932611-25932641,25932853-25933004,
25934622-25934840
Length = 361
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 397 RSRPTTRTLKSLPTVLGTPPTQQPATGGRLNPRSSPKKW 281
+SRPT T K + + TPP P +GG ++P + P +
Sbjct: 50 QSRPTDYT-KDMQKPMQTPPPHFPMSGGYMSPGTPPSMY 87
>07_03_0460 + 18425464-18427473
Length = 669
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 270 LPLDRKHEP-KPSIFHPETVRN*RCKKIQ 187
LP D K EP KP + H E +R RC ++
Sbjct: 588 LPHDLKSEPDKPVLLHQEAIRGRRCNHLE 616
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 222 RDGRSMVLVRVFGLMVSVVCHFLGELLGFSLPPVAGCCVGGV 347
RDGR +V+ FG++ + F+ S PP CVGG+
Sbjct: 708 RDGRCVVMELDFGVLCDNITFFVAMAPHPSSPPPPLLCVGGL 749
>04_04_1268 -
32262994-32263017,32263411-32263488,32263653-32263800,
32263890-32264127,32264210-32264420,32264499-32264680,
32264765-32264866,32265009-32266317,32266906-32266988,
32267436-32267559
Length = 832
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 147 KPFWS-GLAPFAVETEFFYSVSCGRFRDGRSMVLVRVFGLMVSVVCHFLGELLGFSLPPV 323
+ FWS GL V + F S S G S+VLV L+V+VV + G F++P
Sbjct: 13 RSFWSSGLFGNNVNAKIFQSESNTPLESGGSIVLVGSLVLLVTVVLFWPG---SFAVPGK 69
Query: 324 AGC 332
+ C
Sbjct: 70 SSC 72
>01_04_0054 - 15456668-15459691
Length = 1007
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -1
Query: 332 ATRHRRETEPQELAQEMAYNAYH*TENTNQNHRSSIPKPSATDAVKKFSLNCERCKTR 159
+T+ + T+P+ + M + N + + SS+ PSA +A F C CKT+
Sbjct: 183 STQPMQATQPKHATEPMEKTDANRASNAKEGYGSSVRPPSAGEA---FWTMCVNCKTK 237
>11_06_0682 - 26253319-26253575,26254009-26254114
Length = 120
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -2
Query: 382 TRTLKSLPTVLGTPPTQQPATGGRLNPRSSPKKWHTTLTIRPKTRTKTIDLPSRNRPQ 209
T+++ + PT TP + P T PR S W + TK++ +RPQ
Sbjct: 49 TQSMPTTPTTPVTPSSSSPTTTATTTPRGS-NVWRSVFHPGSNLATKSLGANLFDRPQ 105
>08_02_1243 - 25527523-25527960,25527993-25528604
Length = 349
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = -2
Query: 382 TRTLKSLPTVLGTPPTQQPA-TGGRLNPRSSPKKW----HTTLTIRPKTRTKTIDLP 227
T + + PT+ +PPTQ A G R +P SP H LT P I++P
Sbjct: 89 TPSSRGAPTMCSSPPTQSAAPPGSRCSPSPSPTAAAAGDHPLLTQSPHDLVPFIEVP 145
>05_01_0334 -
2642998-2643063,2643125-2643169,2643552-2643617,
2643625-2643730,2643770-2644349,2645780-2645871,
2645969-2646035,2646126-2646231,2646628-2646708,
2646789-2647058,2647158-2648788,2648834-2649385,
2650602-2651324,2651451-2651526
Length = 1486
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 332 ATRHRRETEPQELAQEMAYNAYH*TENTNQNHRSSIPKPSATDAVKKFS 186
+T H T+ Q L ++ H +ENT Q + KP+ DA ++ S
Sbjct: 741 STEHTCATDAQNLQLRRDASSQHASENTAQGYEPCRSKPTIEDACRENS 789
>03_03_0090 +
14367033-14367279,14367402-14368205,14368314-14370039,
14370135-14370219,14370398-14370457,14370744-14370836
Length = 1004
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -2
Query: 382 TRTLKSLPTVLGTPPTQQPATGGRLNPRSSPKKWHTTLTIRPKTRTKTIDLPSRN 218
T L LP++LGTPP Q + + SS + +T++ K ++ D+ +N
Sbjct: 312 TPPLADLPSLLGTPPLAQSSAQEPVVSTSSQQVGPLNMTVKSKLHSE-YDIAEKN 365
>03_02_0613 -
9848514-9848539,9848942-9849200,9849326-9849365,
9849952-9850117,9850228-9850756
Length = 339
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3
Query: 354 SLGRRLRSNPPQEGD*TPGARPRNGIQRLPLDRKHEPKPSI 232
SLG + R+ PP +P A P LP H+P P+I
Sbjct: 138 SLGAKPRAQPPHLLRPSPPATPGPHAPALPSPHHHQPAPAI 178
>02_02_0662 - 12736904-12737214,12737632-12737914
Length = 197
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 290 GRAPGVQSPSCGGLLRRRRPKDRGQRFEGASCRPR 394
G G + CG + RR RG+R G +CR R
Sbjct: 147 GGGGGGDAGGCGAVYSARRLAGRGRRCSGPTCRER 181
>04_04_0440 - 25219961-25221529
Length = 522
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = -3
Query: 447 LLLRCLRGSGYLPALQEDRGRQLA---PSNRCPRSLGRRLR 334
L LRC RGSG +L +D RQ+A PS R R R LR
Sbjct: 103 LALRCARGSG-TDSLSDDGARQVAAALPSARLARLKLRGLR 142
>02_05_0750 - 31479876-31480985
Length = 369
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 393 DLLAKLEDSQSHGDNEGEERQLKSVPSLQTEDTD 494
+L+ L+D GD GEER+ +S P D D
Sbjct: 103 ELMEGLDDKDEEGDVRGEERRGQSTPGSPEFDPD 136
>01_06_0906 +
32886693-32886919,32887589-32887708,32887978-32888101,
32888224-32888361,32888492-32888701,32889085-32889232,
32890452-32890801,32890909-32890963,32891087-32891382,
32891480-32891531,32891740-32891947,32892064-32892446,
32894102-32894538,32895452-32895643
Length = 979
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 299 PGVQSPSCGGLLRRRRPKDRGQRFEGASCRPRS 397
PG Q S GG+L+RR+ D Q FE +P S
Sbjct: 532 PGDQQRSSGGILKRRKFSD-PQNFEDGMFQPTS 563
>12_01_0724 - 6377023-6379392
Length = 789
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 403 ARRSRPTTRTLKSLPTVLGTPPTQQPATGG 314
ARR+ TR ++P+ TPPTQ+ GG
Sbjct: 146 ARRAAAVTRRSSAIPS--STPPTQEDVRGG 173
>04_04_1351 - 32827136-32827984
Length = 282
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 252 VFGLMVSVVCHFLGELLGFSLPPVAGCCVGGVPRTVG 362
V G +V V +G ++G +PPV G VGGV VG
Sbjct: 48 VVGGIVGGVAPVVGGIVG-KVPPVVGGVVGGVAPVVG 83
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 252 VFGLMVSVVCHFLGELLGFSLPPVAGCCVGGVPRTVG 362
V G +V V +G ++G +PPV G VGGV VG
Sbjct: 70 VVGGVVGGVAPVVGGIVG-KVPPVVGGVVGGVAPVVG 105
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 252 VFGLMVSVVCHFLGELLGFSLPPVAGCCVGGVPRTVG 362
V G +V V +G ++G +PPV G VGGV VG
Sbjct: 92 VVGGVVGGVAPVVGGIVG-KVPPVVGGVVGGVAPVVG 127
>08_01_0985 -
9960064-9960249,9960327-9960419,9960518-9960578,
9960667-9960774,9960921-9961106,9961427-9962421,
9962626-9962988,9963085-9963333,9963419-9963574
Length = 798
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = -3
Query: 432 LRGSGYLPALQEDRGRQLAPSNRCPRSLGRRLRSNPPQEGD*TPGARPRNGIQRLPLDRK 253
L S QED +PS+ CP +R + +EGD P+ G + +P K
Sbjct: 4 LEDSSSSDVAQEDN-EYSSPSDPCPSPSPKRRKKGDSEEGD-KDYIPPKEG-ETVPRRSK 60
Query: 252 HEPKPSI 232
+PK +
Sbjct: 61 RQPKKKV 67
>07_03_0961 -
22921761-22921850,22922204-22922338,22922409-22922531,
22922621-22922707,22922780-22922831,22922939-22923063,
22923724-22923932,22924206-22924407,22924526-22924630,
22925353-22925414,22925755-22925944,22926017-22926112,
22926203-22926305,22927019-22927122,22927264-22927395,
22928257-22928343,22929121-22929206,22929291-22929383,
22932197-22932284,22932402-22932514,22932621-22932743,
22934153-22934204,22934365-22934408,22934498-22934571,
22934655-22934746,22935594-22935661,22937146-22937221,
22937323-22937679
Length = 1055
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 288 RNGIQRLPLDRKHEPKPSIFHP 223
+N + R P++ H PKP+IF P
Sbjct: 564 QNWVNRAPMEDLHIPKPNIFIP 585
>07_01_0483 +
3633010-3633203,3633652-3633957,3634598-3634821,
3635722-3635825,3636528-3636662,3637537-3637705,
3638074-3638209,3639200-3639338,3640487-3640663,
3640874-3641041,3641363-3641458,3642217-3642345,
3642439-3642669
Length = 735
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -1
Query: 431 SVALAIFQLCKKIAAD--NSHPQIAAHGPWDAAYAATRHRRETEPQELAQEMAYNAYH*T 258
SVA + +C+ + D N Q+ A Y +++ +ELA+ + Y Y T
Sbjct: 363 SVAAIVGCMCQLVVKDIENGDEQVKADAMRIGQYKDGEFPKDS--RELAKRLFYTVYMGT 420
Query: 257 ENTNQNHRS 231
EN+++ RS
Sbjct: 421 ENSSEGTRS 429
>11_06_0536 + 24750533-24750818,24752950-24753018,24753214-24753239
Length = 126
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 290 GRAPGVQSPSCGGLLRRRRPKDRGQRFEGASCRPRSSCKAG 412
G + GV + GG+ RR R RGQR G +C ++ AG
Sbjct: 21 GCSGGVGRRAGGGVARRPRRPARGQR-PGDACATEAAAAAG 60
>11_06_0105 - 20173014-20173160,20173365-20173431,20173690-20173766
Length = 96
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 215 TVSGWKIDGFGSCFRSNGKRCMPFLGRAPGVQSPSCGG 328
T G ++DG GS +RSN R M F ++ GV C G
Sbjct: 9 TRRGARVDGGGSDWRSN--RLMAFNRKSEGVDPIGCFG 44
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 435 NEGEERQLKSVPSLQTEDTDSQWDEGHGL 521
+E R S PSLQ + T+ +GHG+
Sbjct: 79 SEAPARYFSSEPSLQVDSTEENGFKGHGM 107
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +3
Query: 411 EDSQSHGDNEGEERQLKSVPSLQTEDTDSQWDE 509
+D+ S+GD +G+++ + + +Q +D+DS +D+
Sbjct: 174 KDAVSNGDKKGQKKAMGRI--MQGDDSDSDYDD 204
>07_03_0839 + 21916842-21917852,21917944-21919602
Length = 889
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 300 GARPRNGIQRLPLDRKHEPKPSIFHP 223
GAR +G R PL R ++ K SI HP
Sbjct: 71 GARGGDGAARPPLFRTYKVKGSILHP 96
>02_01_0035 - 220036-221419,222050-222801
Length = 711
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 411 EDSQSHGDNEGEERQLKSVPSLQTEDTDSQWDEGH 515
+++ GD +G+E + T+D D Q DE H
Sbjct: 674 DEAHHDGDGDGDEEDVGVGVGRATDDHDDQVDESH 708
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,780,962
Number of Sequences: 37544
Number of extensions: 338291
Number of successful extensions: 1340
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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