Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS318F09f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY190519-1|AAO38848.1| 1692|Homo sapiens Rab3A-interacting molec... 37 0.049
AL590011-1|CAI16961.1| 1039|Homo sapiens regulating synaptic mem... 37 0.049
AL445256-1|CAI39598.1| 1039|Homo sapiens regulating synaptic mem... 37 0.049
AL390056-1|CAI21554.1| 1039|Homo sapiens regulating synaptic mem... 37 0.049
AL034373-1|CAI20558.1| 1039|Homo sapiens regulating synaptic mem... 37 0.049
AB051866-1|BAB87242.1| 1470|Homo sapiens RIM long form protein. 37 0.049
AB045726-1|BAB87121.1| 1028|Homo sapiens RIM short form protein. 37 0.049
AB002338-1|BAA20798.1| 1053|Homo sapiens KIAA0340 protein. 37 0.049
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 36 0.065
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 33 0.46
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 33 0.46
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 33 0.46
AK126810-1|BAC86703.1| 195|Homo sapiens protein ( Homo sapiens ... 30 4.3
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 30 5.7
X51435-1|CAA35798.1| 2717|Homo sapiens protein ( Human PRDII-BF1... 29 7.5
BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein. 29 7.5
AL117481-1|CAB55954.1| 319|Homo sapiens hypothetical protein pr... 29 7.5
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 29 7.5
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 29 7.5
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 29 7.5
AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane muc... 29 7.5
AB209718-1|BAD92955.1| 518|Homo sapiens Dematin variant protein. 29 7.5
DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial l... 29 9.9
BC146783-1|AAI46784.1| 1773|Homo sapiens FNDC1 protein protein. 29 9.9
AY754876-1|AAW82950.1| 225|Homo sapiens ABCC5 variant 4 protein. 29 9.9
AB058769-1|BAB47495.2| 1783|Homo sapiens KIAA1866 protein protein. 29 9.9
>AY190519-1|AAO38848.1| 1692|Homo sapiens Rab3A-interacting molecule
protein.
Length = 1692
Score = 36.7 bits (81), Expect = 0.049
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = -3
Query: 411 PALQEDRGRQLAPSNRC----PRSLGRRLRSNPPQEGD*TPGARPRNGIQRLPLDRKHEP 244
P+ DR + PS + + R RS PP+E TPG +NG L +RK P
Sbjct: 235 PSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGALKSERKRVP 294
Query: 243 KPS 235
K S
Sbjct: 295 KTS 297
>AL590011-1|CAI16961.1| 1039|Homo sapiens regulating synaptic
membrane exocytosis 1 protein.
Length = 1039
Score = 36.7 bits (81), Expect = 0.049
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = -3
Query: 411 PALQEDRGRQLAPSNRC----PRSLGRRLRSNPPQEGD*TPGARPRNGIQRLPLDRKHEP 244
P+ DR + PS + + R RS PP+E TPG +NG L +RK P
Sbjct: 235 PSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGALKSERKRVP 294
Query: 243 KPS 235
K S
Sbjct: 295 KTS 297
>AL445256-1|CAI39598.1| 1039|Homo sapiens regulating synaptic
membrane exocytosis 1 protein.
Length = 1039
Score = 36.7 bits (81), Expect = 0.049
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = -3
Query: 411 PALQEDRGRQLAPSNRC----PRSLGRRLRSNPPQEGD*TPGARPRNGIQRLPLDRKHEP 244
P+ DR + PS + + R RS PP+E TPG +NG L +RK P
Sbjct: 235 PSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGALKSERKRVP 294
Query: 243 KPS 235
K S
Sbjct: 295 KTS 297
>AL390056-1|CAI21554.1| 1039|Homo sapiens regulating synaptic
membrane exocytosis 1 protein.
Length = 1039
Score = 36.7 bits (81), Expect = 0.049
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = -3
Query: 411 PALQEDRGRQLAPSNRC----PRSLGRRLRSNPPQEGD*TPGARPRNGIQRLPLDRKHEP 244
P+ DR + PS + + R RS PP+E TPG +NG L +RK P
Sbjct: 235 PSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGALKSERKRVP 294
Query: 243 KPS 235
K S
Sbjct: 295 KTS 297
>AL034373-1|CAI20558.1| 1039|Homo sapiens regulating synaptic
membrane exocytosis 1 protein.
Length = 1039
Score = 36.7 bits (81), Expect = 0.049
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = -3
Query: 411 PALQEDRGRQLAPSNRC----PRSLGRRLRSNPPQEGD*TPGARPRNGIQRLPLDRKHEP 244
P+ DR + PS + + R RS PP+E TPG +NG L +RK P
Sbjct: 235 PSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGALKSERKRVP 294
Query: 243 KPS 235
K S
Sbjct: 295 KTS 297
>AB051866-1|BAB87242.1| 1470|Homo sapiens RIM long form protein.
Length = 1470
Score = 36.7 bits (81), Expect = 0.049
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = -3
Query: 411 PALQEDRGRQLAPSNRC----PRSLGRRLRSNPPQEGD*TPGARPRNGIQRLPLDRKHEP 244
P+ DR + PS + + R RS PP+E TPG +NG L +RK P
Sbjct: 235 PSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGALKSERKRVP 294
Query: 243 KPS 235
K S
Sbjct: 295 KTS 297
>AB045726-1|BAB87121.1| 1028|Homo sapiens RIM short form protein.
Length = 1028
Score = 36.7 bits (81), Expect = 0.049
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = -3
Query: 411 PALQEDRGRQLAPSNRC----PRSLGRRLRSNPPQEGD*TPGARPRNGIQRLPLDRKHEP 244
P+ DR + PS + + R RS PP+E TPG +NG L +RK P
Sbjct: 235 PSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGALKSERKRVP 294
Query: 243 KPS 235
K S
Sbjct: 295 KTS 297
>AB002338-1|BAA20798.1| 1053|Homo sapiens KIAA0340 protein.
Length = 1053
Score = 36.7 bits (81), Expect = 0.049
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = -3
Query: 411 PALQEDRGRQLAPSNRC----PRSLGRRLRSNPPQEGD*TPGARPRNGIQRLPLDRKHEP 244
P+ DR + PS + + R RS PP+E TPG +NG L +RK P
Sbjct: 260 PSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGALKSERKRVP 319
Query: 243 KPS 235
K S
Sbjct: 320 KTS 322
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 36.3 bits (80), Expect = 0.065
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 RSRPTTRTLKSLPTVLGTPPTQQPATGGRLNPRSSPKKWHTTLTIRPK-TRTKTIDLPSR 221
R+ PT R ++ PT G+PP P T R +PR+ P+ TT R TRT + P+
Sbjct: 252 RASPTRRPPRASPT--GSPPRASPMTPPRASPRTPPRASPTTTPSRASLTRTPSWASPTT 309
Query: 220 NRPQLTL*K 194
+ +L K
Sbjct: 310 TPSRASLMK 318
Score = 31.5 bits (68), Expect = 1.9
Identities = 24/81 (29%), Positives = 33/81 (40%)
Frame = -2
Query: 403 ARRSRPTTRTLKSLPTVLGTPPTQQPATGGRLNPRSSPKKWHTTLTIRPKTRTKTIDLPS 224
A RS P+T +L P+ A+ R PR SP+ H R R P
Sbjct: 167 ATRS-PSTASLTRTPSRASLTRWPPRASPTRTPPRESPRMSHRASPTRTPPRASPTRRPP 225
Query: 223 RNRPQLTL*KNSVSTANGARP 161
R P T + S+ T++ A P
Sbjct: 226 RASPTRTPPRESLRTSHRASP 246
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 33.5 bits (73), Expect = 0.46
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = -2
Query: 394 SRPTTRTLKSLPTVLGTPPTQQPAT----GGRLNPRSSPKKWHTTLTIRPKTRTKTIDLP 227
S PTT T PT +PPT P T L P ++P TT T P T T +
Sbjct: 978 SPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTT 1037
Query: 226 SRNRPQLT 203
+ P +T
Sbjct: 1038 TTPSPPIT 1045
Score = 31.9 bits (69), Expect = 1.4
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -2
Query: 394 SRPTTRTLKSLPTVLGTPPTQQPAT----GGRLNPRSSPKKWHTTLTIRPKTRT 245
S PTT T PT +PPT P T L P ++P TT T P T T
Sbjct: 899 SPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTT 952
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -2
Query: 394 SRPTTRTLKSLPTVLGTP----PTQQPATGGRLNPRSSPKKWHTTLTIRPKTRT 245
S PTT T PT +P P PA+ L P ++P TT T P T T
Sbjct: 860 SPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTT 913
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 33.5 bits (73), Expect = 0.46
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = -2
Query: 394 SRPTTRTLKSLPTVLGTPPTQQPAT----GGRLNPRSSPKKWHTTLTIRPKTRTKTIDLP 227
S PTT T PT +PPT P T L P ++P TT T P T T +
Sbjct: 261 SPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTT 320
Query: 226 SRNRPQLT 203
+ P +T
Sbjct: 321 TTPSPPIT 328
Score = 32.3 bits (70), Expect = 1.1
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = -2
Query: 394 SRPTTRTLKSLPTVLGTPPT----QQPATGGRLNPRSSPKKWHTTLTIRPKTRT 245
S PTT T PT +PPT PA+ L P ++P TT T P T T
Sbjct: 143 SPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTT 196
Score = 31.9 bits (69), Expect = 1.4
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -2
Query: 394 SRPTTRTLKSLPTVLGTPPTQQPAT----GGRLNPRSSPKKWHTTLTIRPKTRT 245
S PTT T PT +PPT P T L P ++P TT T P T T
Sbjct: 182 SPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTT 235
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 33.5 bits (73), Expect = 0.46
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = -2
Query: 394 SRPTTRTLKSLPTVLGTPPTQQPAT----GGRLNPRSSPKKWHTTLTIRPKTRTKTIDLP 227
S PTT T PT +PPT P T L P ++P TT T P T T +
Sbjct: 1603 SPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTT 1662
Query: 226 SRNRPQLT 203
+ P +T
Sbjct: 1663 TTPSPPIT 1670
Score = 31.9 bits (69), Expect = 1.4
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -2
Query: 394 SRPTTRTLKSLPTVLGTPPTQQPAT----GGRLNPRSSPKKWHTTLTIRPKTRT 245
S PTT T PT +PPT P T L P ++P TT T P T T
Sbjct: 1524 SPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTT 1577
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -2
Query: 394 SRPTTRTLKSLPTVLGTP----PTQQPATGGRLNPRSSPKKWHTTLTIRPKTRT 245
S PTT T PT +P P PA+ L P ++P TT T P T T
Sbjct: 1485 SPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTT 1538
>AK126810-1|BAC86703.1| 195|Homo sapiens protein ( Homo sapiens
cDNA FLJ44860 fis, clone BRALZ2007661. ).
Length = 195
Score = 30.3 bits (65), Expect = 4.3
Identities = 31/99 (31%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = -3
Query: 519 GHDPHPIGYRCPRSEGLERSSAVFLLLRCLRGSGYLPALQEDRGRQLAPSNRCPRSLGRR 340
G PH CPR+ L A+ + C G Q R Q A +R P+ L R
Sbjct: 17 GLQPHRGPSVCPRASPLRAWPALLPVTPCSSGLRTPHPPQHLRKPQKAAKSRSPQPLARP 76
Query: 339 -LRS---NPPQEGD*TPGARPRNGIQRLPLDRKHEPKPS 235
L S PP G P A PR PL P P+
Sbjct: 77 WLASGTFRPPSTGSVLPPA-PRTVQPETPLPLSQPPGPT 114
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 29.9 bits (64), Expect = 5.7
Identities = 21/63 (33%), Positives = 27/63 (42%)
Frame = -2
Query: 388 PTTRTLKSLPTVLGTPPTQQPATGGRLNPRSSPKKWHTTLTIRPKTRTKTIDLPSRNRPQ 209
P+T P VL +P T AT + SSP+ TTL + T TK+ P
Sbjct: 52 PSTPGTAPPPKVLTSPATTPTATSSKATSSSSPRT-ATTLPVLTSTATKSTATSVTPIPS 110
Query: 208 LTL 200
TL
Sbjct: 111 STL 113
>X51435-1|CAA35798.1| 2717|Homo sapiens protein ( Human PRDII-BF1 gene
for a DNA-binding protein. ).
Length = 2717
Score = 29.5 bits (63), Expect = 7.5
Identities = 26/98 (26%), Positives = 39/98 (39%)
Frame = -1
Query: 482 GLKAWNALQLSFFSFVVSVALAIFQLCKKIAADNSHPQIAAHGPWDAAYAATRHRRETEP 303
GL+ NAL + SV + Q K I NSH + A GP E +
Sbjct: 1056 GLQFQNALGCNPSLPKHSVTIRSDQQHKNIQLQNSHIHLVARGPEQTMDPKLSTIMEQQI 1115
Query: 302 QELAQEMAYNAYH*TENTNQNHRSSIPKPSATDAVKKF 189
AQ+ H T + H +S+ +P++ D + F
Sbjct: 1116 SSAAQDKIELQRHGTGISVIQHTNSLSRPNSFDKPEPF 1153
>BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.
Length = 1224
Score = 29.5 bits (63), Expect = 7.5
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 394 SRPTTRTLKSLPTVLGTPPTQQPATGGRLNPRSSPKKWHTTLTIRPKTRTKTIDLPS 224
SRP+T T ++P + P T + +P+ TT+T R K T+T P+
Sbjct: 783 SRPSTITSHTIPPTFPPAHSSTPPTTSASSTTVNPEAV-TTMTTRTKPSTRTTSFPT 838
>AL117481-1|CAB55954.1| 319|Homo sapiens hypothetical protein
protein.
Length = 319
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -2
Query: 349 GTPPTQQPATGGRLNPRSSPKKWHTTLTIRPK-TRTKTIDLPSRNRPQLTL*K 194
G+PP P T R +PR+ P+ TT R TRT + P+ + +L K
Sbjct: 5 GSPPRASPMTPPRASPRTPPRASPTTTPSRASLTRTPSWASPTTTPSRASLMK 57
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 29.5 bits (63), Expect = 7.5
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 394 SRPTTRTLKSLPTVLGTPPTQQPATGGRLNPRSSPKKWHTTLTIRPKTRTKTIDLPS 224
SRP+T T ++P + P T + +P+ TT+T R K T+T P+
Sbjct: 4052 SRPSTITSHTIPPTFPPAHSSTPPTTSASSTTVNPEAV-TTMTTRTKPSTRTTSFPT 4107
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 29.5 bits (63), Expect = 7.5
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 394 SRPTTRTLKSLPTVLGTPPTQQPATGGRLNPRSSPKKWHTTLTIRPKTRTKTIDLPS 224
SRP+T T ++P + P T + +P+ TT+T R K T+T P+
Sbjct: 4052 SRPSTITSHTIPPTFPPAHSSTPPTTSASSTTVNPEAV-TTMTTRTKPSTRTTSFPT 4107
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 29.5 bits (63), Expect = 7.5
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = -2
Query: 394 SRPTTRTLKSLPTVLGTPPTQQ----PATGGRLNPRSSPKKWHTTLTIRPKTRTKTIDLP 227
S PTT T + T + + PT P P +S +HTT T P T + T P
Sbjct: 817 SAPTTSTTSTPQTSISSAPTSSTTSAPTASTISAPTTSTTSFHTTSTTSPPT-SSTSSTP 875
Query: 226 SRNRPQLTL*KNSVSTANGARP 161
++ +S ++ +G P
Sbjct: 876 QTSKTSAA--TSSTTSGSGTTP 895
>AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane mucin
MUC17 protein.
Length = 1029
Score = 29.5 bits (63), Expect = 7.5
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 394 SRPTTRTLKSLPTVLGTPPTQQPATGGRLNPRSSPKKWHTTLTIRPKTRTKTIDLPS 224
SRP+T T ++P + P T + +P+ TT+T R K T+T P+
Sbjct: 588 SRPSTITSHTIPPTFPPAHSSTPPTTSASSTTVNPEAV-TTMTTRTKPSTRTTSFPT 643
>AB209718-1|BAD92955.1| 518|Homo sapiens Dematin variant protein.
Length = 518
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 387 RQLAPSNRCPRSLGRRLRSNPPQEGD*TPGARPRNG 280
+ AP+ R P+ G R+ P + P +RPRNG
Sbjct: 409 KPFAPALRLPQKPGLRVEMPPTHDPGPPPASRPRNG 444
>DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial lining
protein protein.
Length = 1836
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = -2
Query: 400 RRSRPTTRTLKSLPTVLGTPPTQQPATGGRLNPRSSPKKWHTTLTIRPKTRTKTIDLPSR 221
+ + P T T++ T P T P R++ ++ T T+R TRT T P
Sbjct: 1390 KTTHPPTTTMQPTTTTTPLPTTTTPRPTTATTRRTTTRR--PTTTVRTTTRTTTTTTPKP 1447
Query: 220 NRP 212
P
Sbjct: 1448 TTP 1450
>BC146783-1|AAI46784.1| 1773|Homo sapiens FNDC1 protein protein.
Length = 1773
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = -2
Query: 400 RRSRPTTRTLKSLPTVLGTPPTQQPATGGRLNPRSSPKKWHTTLTIRPKTRTKTIDLPSR 221
+ + P T T++ T P T P R++ ++ T T+R TRT T P
Sbjct: 1327 KTTHPPTTTMQPTTTTTPLPTTTTPRPTTATTRRTTTRR--PTTTVRTTTRTTTTTTPKP 1384
Query: 220 NRP 212
P
Sbjct: 1385 TTP 1387
>AY754876-1|AAW82950.1| 225|Homo sapiens ABCC5 variant 4 protein.
Length = 225
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 261 LMVSVVCHFLGELLGFSLPPVAGCC 335
L++S+VC + +L GFS PP G C
Sbjct: 179 LILSIVCLMITQLAGFSGPPSFGDC 203
>AB058769-1|BAB47495.2| 1783|Homo sapiens KIAA1866 protein protein.
Length = 1783
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = -2
Query: 400 RRSRPTTRTLKSLPTVLGTPPTQQPATGGRLNPRSSPKKWHTTLTIRPKTRTKTIDLPSR 221
+ + P T T++ T P T P R++ ++ T T+R TRT T P
Sbjct: 1337 KTTHPPTTTMQPTTTTTPLPTTTTPRPTTATTRRTTTRR--PTTTVRTTTRTTTTTTPKP 1394
Query: 220 NRP 212
P
Sbjct: 1395 TTP 1397
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,025,849
Number of Sequences: 237096
Number of extensions: 1830895
Number of successful extensions: 5357
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5337
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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