Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS318F02f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr...    29   2.0  

>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
            F15G9.4b protein.
          Length = 5198

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 248  CIRANRQRRNRCASGAKRRIGPSVEDSEQVLQGR 349
            CI  N+   ++  +  +  + P +ED E+VLQG+
Sbjct: 3196 CIATNKAGESQTTTDVEVLVPPRIEDEERVLQGK 3229


>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
            F15G9.4a protein.
          Length = 5175

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 248  CIRANRQRRNRCASGAKRRIGPSVEDSEQVLQGR 349
            CI  N+   ++  +  +  + P +ED E+VLQG+
Sbjct: 3196 CIATNKAGESQTTTDVEVLVPPRIEDEERVLQGK 3229


>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
            F15G9.4b protein.
          Length = 5198

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 248  CIRANRQRRNRCASGAKRRIGPSVEDSEQVLQGR 349
            CI  N+   ++  +  +  + P +ED E+VLQG+
Sbjct: 3196 CIATNKAGESQTTTDVEVLVPPRIEDEERVLQGK 3229


>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
            F15G9.4a protein.
          Length = 5175

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 248  CIRANRQRRNRCASGAKRRIGPSVEDSEQVLQGR 349
            CI  N+   ++  +  +  + P +ED E+VLQG+
Sbjct: 3196 CIATNKAGESQTTTDVEVLVPPRIEDEERVLQGK 3229


>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
            precursor protein.
          Length = 5198

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 248  CIRANRQRRNRCASGAKRRIGPSVEDSEQVLQGR 349
            CI  N+   ++  +  +  + P +ED E+VLQG+
Sbjct: 3196 CIATNKAGESQTTTDVEVLVPPRIEDEERVLQGK 3229


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,246,555
Number of Sequences: 27780
Number of extensions: 204796
Number of successful extensions: 450
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)