Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS318F02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.9  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   2.5  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   3.3  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   5.8  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 375 GEPLHVDPHLIEGH 416
           G P+H+ P L+ GH
Sbjct: 756 GTPVHMAPELLSGH 769


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 375 GEPLHVDPHLIEGH 416
           G P+H+ P L+ GH
Sbjct: 794 GTPVHMAPELLSGH 807


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 104 FSYFMDTIANVLLLYSFENLR 42
           F+Y  D     LL+Y F N R
Sbjct: 197 FAYIADVTGFALLVYDFRNSR 217


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 375 GEPLHVDPHLIEGH 416
           GE  H DPH   GH
Sbjct: 17  GEIAHNDPHFAPGH 30


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 281 CASGAKRRIGPSVEDSEQVLQGRCASSHT 367
           C +   R +GP +   EQV + RC    T
Sbjct: 127 CGNFPPRPMGPWISVQEQVPRFRCIGPPT 155


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,778
Number of Sequences: 438
Number of extensions: 2361
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)