Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS318D08f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          26   0.27 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      26   0.27 
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    24   0.82 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    24   0.82 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   3.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   4.4  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   5.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   5.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   5.8  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -1

Query: 143 FYCTIYKCILNFVFKIDIEQDIHNNTNIIICNMKIFTF 30
           FY  IYK I+++     + Q  +N   II  N+KI +F
Sbjct: 418 FY-RIYKRIIDYYHSYKMHQKPYNKDEIIYPNLKIESF 454


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -1

Query: 143 FYCTIYKCILNFVFKIDIEQDIHNNTNIIICNMKIFTF 30
           FY  IYK I+++     + Q  +N   II  N+KI +F
Sbjct: 418 FY-RIYKRIIDYYHSYKMHQKPYNKDEIIYPNLKIESF 454


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 346 DLISDFFFYCP**YVRYFLREIYLKILKYTF 254
           D++ D+FF CP  +      +  +K+  Y F
Sbjct: 449 DVVGDYFFICPSIHFAQLFADRGMKVYYYFF 479


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 346 DLISDFFFYCP**YVRYFLREIYLKILKYTF 254
           D++ D+FF CP  +      +  +K+  Y F
Sbjct: 449 DVVGDYFFICPSIHFAQLFADRGMKVYYYFF 479


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 252 NISVK*SHSINKIVMYVIS 196
           NI +K   S+NK+  YVIS
Sbjct: 411 NIHIKGVISLNKLTSYVIS 429


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 241 NTYIQKYILKFSNIFPSKSNGHIIKGNKKKSRLLNQ 348
           N Y   Y    SN   S ++  + K NK++ + +N+
Sbjct: 136 NNYNDNYFYSKSNGSNSSNSDVLFKQNKEEEQTINR 171


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 4/27 (14%)
 Frame = +2

Query: 161 WRIFSG----LRFFLTEITYITILFIL 229
           WR F+     L FF+   TYI IL  L
Sbjct: 401 WRHFAAIIEWLSFFIVIFTYIIILITL 427


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 466 SPLATVKKLEKLKVENDAYEADEGL 392
           +PL  +K   K+      YEA EG+
Sbjct: 27  TPLGAIKGYYKISGNGKQYEAYEGI 51


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 466 SPLATVKKLEKLKVENDAYEADEGL 392
           +PL  +K   K+      YEA EG+
Sbjct: 27  TPLGAIKGYYKISGNGKQYEAYEGI 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,815
Number of Sequences: 438
Number of extensions: 2478
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)