Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS318D06f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2G5.03 |||ATP binding protein|Schizosaccharomyces pombe|chr ... 68 7e-13
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 31 0.079
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 31 0.10
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.10
SPBC23G7.11 |||DNA-3-methyladenine glycosidase Mag2 |Schizosacch... 30 0.18
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 30 0.18
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 30 0.24
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 29 0.32
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 29 0.32
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 29 0.42
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 29 0.56
SPAC6B12.13 |||protein phosphatase inhibitor |Schizosaccharomyce... 28 0.97
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 28 0.97
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 1.3
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 27 1.3
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 1.7
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 26 3.0
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 26 3.0
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 26 3.0
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 26 3.9
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 26 3.9
SPAPB1E7.01c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 3.9
SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr ... 26 3.9
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 26 3.9
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 26 3.9
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 26 3.9
SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 26 3.9
SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizos... 25 5.2
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 25 5.2
SPAC16A10.03c |||zinc finger protein Pep5/Vps11 |Schizosaccharom... 25 5.2
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 25 5.2
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 6.8
SPCC794.03 |||amino acid permease, unknown 13|Schizosaccharomyce... 25 6.8
SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor |Schizo... 25 6.8
SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual 25 6.8
SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr 3|||... 25 6.8
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 6.8
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 25 9.0
SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr 3|||... 25 9.0
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 25 9.0
SPCP31B10.05 |||tyrosyl-DNA phosphodiesterase |Schizosaccharomyc... 25 9.0
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 25 9.0
SPAC688.08 |srb8|med12|mediator complex subunit Srb8 |Schizosacc... 25 9.0
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 25 9.0
SPBC887.14c |pfh1|pif1|pif1 helicase homolog Pfh1|Schizosaccharo... 25 9.0
SPAC14C4.16 |dad3||DASH complex subunit Dad3|Schizosaccharomyces... 25 9.0
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha... 25 9.0
SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces p... 25 9.0
>SPBC2G5.03 |||ATP binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 335
Score = 68.1 bits (159), Expect = 7e-13
Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Frame = -2
Query: 520 ETMSIKEEVS--LPTQRLCIRCNFVSSQEVCKACVLLEGLNKGLPKLGIGKSSKVKKL 353
E+M + V LP Q C RC F+SS +CKAC+LLEGLNKG+ LG+G K KKL
Sbjct: 269 ESMQLASSVQEQLPQQTTCERCGFISSNRICKACMLLEGLNKGITGLGLGSDRKTKKL 326
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 31.5 bits (68), Expect = 0.079
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Frame = -2
Query: 382 IGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKICKSISNGFKQKECNGTNCC 203
I SKV L+ + ++TA L++ D K+ K++ + QKE
Sbjct: 4 ISMKSKVCPLIYHFLQENGYVKTAQTFLKETGDKDLAKGKVKKNLLDLLSQKEFLPYLTT 63
Query: 202 TN-----KTERNVEKNNEKLQTVLDK---------YSLENNSQVRLDEEDSDDSEIKHQD 65
+ KT+ ++EK+N+ Q + K S + S DE DS SE +
Sbjct: 64 EDVGKHKKTKESLEKSNDDSQKISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSS 123
Query: 64 EDDTCSSS 41
ED+ SSS
Sbjct: 124 EDNDSSSS 131
Score = 27.1 bits (57), Expect = 1.7
Identities = 23/102 (22%), Positives = 44/102 (43%)
Frame = -2
Query: 346 EYNTRQNNLETAVKDLEDCNITDKKTSKICKSISNGFKQKECNGTNCCTNKTERNVEKNN 167
E ++ ++ ++ D E + ++ S S S E N ++ ++ +E E ++
Sbjct: 192 ESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSES--ESSS 249
Query: 166 EKLQTVLDKYSLENNSQVRLDEEDSDDSEIKHQDEDDTCSSS 41
E D S ++S+ +DSD S EDD+ S S
Sbjct: 250 EDS----DSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDS 287
Score = 25.8 bits (54), Expect = 3.9
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = -2
Query: 346 EYNTRQNNLETAVKDLEDCNITDKKTSKICKSISNGFKQKECNGTNCCTNKTE-RNVEKN 170
E ++ N+ ++ D E + ++ S S S E + ++ ++ +E + ++
Sbjct: 120 ESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSED 179
Query: 169 NEKLQTVLDKYSLENNSQVRLDEEDSDDSEIKHQDEDDTCSSS 41
N+ + D S E++S+ S DSE + E SSS
Sbjct: 180 NDSSSSSSDSES-ESSSEDSDSSSSSSDSESESSSEGSDSSSS 221
Score = 25.0 bits (52), Expect = 6.8
Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 6/120 (5%)
Frame = -2
Query: 382 IGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKICKSISNGFKQKECNGTNCC 203
+GK K K+ L++ N + E + + + + S + E ++
Sbjct: 66 VGKHKKTKESLEKSNDDSQKISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSSED 125
Query: 202 TNKTERNVEKNNEKLQTVLDKYSLENNSQVRLDEEDSDDS------EIKHQDEDDTCSSS 41
+ + + + +E D S ++S+ E SD S E + ED+ SSS
Sbjct: 126 NDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSS 185
Score = 25.0 bits (52), Expect = 6.8
Identities = 19/102 (18%), Positives = 40/102 (39%)
Frame = -2
Query: 346 EYNTRQNNLETAVKDLEDCNITDKKTSKICKSISNGFKQKECNGTNCCTNKTERNVEKNN 167
E ++ ++ ++ D E + ++ S S S E N ++ ++ +E +
Sbjct: 138 ESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSED 197
Query: 166 EKLQTVLDKYSLENNSQVRLDEEDSDDSEIKHQDEDDTCSSS 41
+ E++S+ S SE + ED+ SSS
Sbjct: 198 SDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSS 239
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 31.1 bits (67), Expect = 0.10
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = -2
Query: 193 TERNVEKNNEKLQTVLDKYSLENNSQVRLDEEDSDDSEIKHQDEDDT 53
++ +V+ +N+ + + + E+NSQ +D +S+ S+ + ED+T
Sbjct: 121 SDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDET 167
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.1 bits (67), Expect = 0.10
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = -2
Query: 286 ITDKKTSKICKSISNGFKQKECNGTNCCTNKTERNVEKNNEK----LQTVLDKYSLENNS 119
I +KK S S + + E ++ + + E VEK EK ++ D S ++S
Sbjct: 156 IEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDSS 215
Query: 118 QVRLDEEDSDDSEIKHQDEDD 56
D + S DSE + ED+
Sbjct: 216 SESGDSDSSSDSESESSSEDE 236
>SPBC23G7.11 |||DNA-3-methyladenine glycosidase Mag2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 213
Score = 30.3 bits (65), Expect = 0.18
Identities = 23/100 (23%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Frame = -2
Query: 349 DEYNTRQNNLETAVKDLEDCNITDKKTSKICKSISNGFKQKECNGTNCCTNKTERNVEKN 170
DE+ T + +ET V+ L +C + K+ +I ++ K+ + +E + ++
Sbjct: 74 DEFPTPKQIMETDVETLHECGFSKLKSQEI-HIVAEAALNKQIPSKSEIEKMSEEELMES 132
Query: 169 NEKLQTVLDKYSLENNSQV---RLDEEDSDDSEIKHQDED 59
K++ V ++++E S RLD +DDS +K++ ++
Sbjct: 133 LSKIKGV-KRWTIEMYSIFTLGRLDIMPADDSTLKNEAKE 171
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 30.3 bits (65), Expect = 0.18
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -2
Query: 199 NKTERNVEKNNEKLQTVLDKYSLENNSQVRLDEEDSDDSEIKHQDEDDTCSSSCGR 32
N+ E + NN+K + D EN + +EE+ +D E +DE+D S GR
Sbjct: 81 NENEVDNVNNNDKKEDE-DNVE-ENEEEADANEEEEEDEEDDEEDEEDEDESGGGR 134
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/55 (21%), Positives = 27/55 (49%)
Frame = -2
Query: 220 NGTNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVRLDEEDSDDSEIKHQDEDD 56
NG++ + +E NEK + +D ++ N ED +++E+ + + +D
Sbjct: 38 NGSDLLNDDSEAAKITTNEKQSSPVDSHNESPNDTTINKGEDGNENEVDNVNNND 92
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.9 bits (64), Expect = 0.24
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = -2
Query: 361 KKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKICKSISNGFKQKE---CNGTNCCTNKT 191
KKL + + +NN +T K L+D T K ++ +N F+QKE + N K
Sbjct: 612 KKLNESHQELENNHQTITKQLKD---TSSKLQQLQLERAN-FEQKESTLSDENNDLRTKL 667
Query: 190 ERNVEKNNEKLQTVLDKYSLENNSQVRLDEEDSDDSE 80
+ E N ++ D SLE N Q +ED SE
Sbjct: 668 LKLEESNKSLIKKQEDVDSLEKNIQTL--KEDLRKSE 702
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 29.5 bits (63), Expect = 0.32
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 142 KYSLENNSQVRLDEEDSDDSEI-KHQDEDDTCS 47
KY+L++ QV ++ ED ++ I QDEDD S
Sbjct: 64 KYALDDLPQVDVENEDEEEDSITSFQDEDDETS 96
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 29.5 bits (63), Expect = 0.32
Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = -2
Query: 148 LDKYS-LENNSQVRLDEEDSDDSEIKHQDE 62
L+KYS +E NS++ DEE+ D+S I Q+E
Sbjct: 53 LEKYSKIELNSEIWEDEEEEDNSGIVSQNE 82
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 29.1 bits (62), Expect = 0.42
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Frame = -2
Query: 418 LEGLNKGLPKLGIGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKICKSISNG 239
L+ +N L + K+SKV+ LL E N + L KDL D T + + ++ +
Sbjct: 913 LKQINNELESELLEKTSKVETLLSEQNELKEKLSLEEKDLLD---TKGELESLRENNATV 969
Query: 238 FKQKECNGTNCCTNKTERNVEKNNE--KLQTVLDKYSLENNSQVRLDEEDSDDSEIKHQ 68
+K C + E V K+ E KL + Y E ++RL + ++ I+ +
Sbjct: 970 LSEK-AEFNEQCKSLQETIVTKDAELDKLTKYISDYKTE-IQEMRLTNQKMNEKSIQQE 1026
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 28.7 bits (61), Expect = 0.56
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Frame = -2
Query: 379 GKSSKVKKLLDEYNTRQNNLETAV------KDLEDCNITDKKTSKICKSISNGFKQKECN 218
GK+ ++ LL+EY + +E+ V D K+ + K+I +G ++E
Sbjct: 175 GKTEEISLLLEEYPDLRKQMESLVPSEVSYDDFWKRFFWHKEVVQPIKAIQSGNDEEEIF 234
Query: 217 --GTNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVRLDEEDSDDSE 80
G + N + N+EK Q+ ++ + ENNS + +E +D E
Sbjct: 235 SWGDERSDEEESDNEQVNDEKKQS-SEEDTTENNSAAEVIDETVNDLE 281
>SPAC6B12.13 |||protein phosphatase inhibitor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 104
Score = 27.9 bits (59), Expect = 0.97
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -2
Query: 172 NNEKLQTVLDKYSLENNSQVRLDEEDSDDSEIKHQDEDDTCSSSCGR 32
+NE + K + Q + DE SD D D +CSS C R
Sbjct: 54 DNEHMNKKKSKVCCIFHKQRKFDESSSDSDS--DSDSDSSCSSCCSR 98
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 27.9 bits (59), Expect = 0.97
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -2
Query: 376 KSSKVKKLLDEYNTRQNNLETAV--KDLEDCNI 284
KSS+V LL YNT +LE A+ KD E N+
Sbjct: 579 KSSEVSNLLSRYNTEVAHLEDALHSKDRELANL 611
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 252 LLQILLVFLSVILQSSKSLTAVSKLFCLVL 341
LL + ++FL ++L+ +L+ + +LFCL L
Sbjct: 176 LLSLAILFLPLLLRVFSTLSRLPRLFCLCL 205
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 27.5 bits (58), Expect = 1.3
Identities = 22/111 (19%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = -2
Query: 409 LNKGLPKLGIGKSSKVKKLLDEYN---TRQNNLETAVKDL-EDCNITDKKTSKICKSISN 242
L +G K + K+ L Y+ T ++ L V DL E IT +K S++ ++++
Sbjct: 899 LCEGRTKELLNSQQKLYDLKHSYSSVMTEKSKLSDQVNDLTEQAKITQRKLSEVQIALAD 958
Query: 241 GFKQKECNGTNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVRLDEEDSD 89
++ +G + + ++ L++ ++ NN+ ++SD
Sbjct: 959 SKMNQQLSGKDSTDVHLPTDFSASSSPLRSYFNEEDSFNNASAAHSSKESD 1009
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 27.1 bits (57), Expect = 1.7
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = -2
Query: 391 KLGIGKSSKVKKLL-DEYNTRQNNLETAVKDLEDCNITDKKTSKICKSISNGFKQKECNG 215
K+ + + K K+ + DE R+ ++ K D + + KS + F+
Sbjct: 1411 KINLSEKEKEKESIEDEEKNREGSMSPVAKHASDV----EDDHDVAKSTAPDFETS---- 1462
Query: 214 TNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVRLDEEDSDDSEIKHQDEDDT 53
+++ ER+ EK + K + EN++ D+ D DD + D D+T
Sbjct: 1463 ----SHRPERSSEKKSPSPVFTSVKQTAENDADNEDDKTDMDDQTEETLDADNT 1512
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 26.2 bits (55), Expect = 3.0
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -2
Query: 340 NTRQNNLETAVKDLEDCNITDKKTSKICKSISNG--FKQKECNGTNCCTNKTERNVEKNN 167
N+RQ +L T VK NIT C S N F KE + ++ + +E N
Sbjct: 623 NSRQIDLSTFVKQANTPNIT-SLLDGTCSSPPNNECFNDKEPDSSSSTLISDRQELEYRN 681
Query: 166 EKLQTV 149
+TV
Sbjct: 682 PNAETV 687
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 26.2 bits (55), Expect = 3.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -2
Query: 328 NNLETAVKDLEDCNITDKKTSKICKSISNGFKQKEC 221
+N+E K +D N KT + +S++ FK+ C
Sbjct: 33 SNMEKEAKHEDDANTLQPKTEEEIESLAKLFKKPSC 68
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 26.2 bits (55), Expect = 3.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 154 TVLDKYSLENNSQVRLDEEDSDDSEIKHQDED 59
T+ D+Y NN + + E + +++K+QDED
Sbjct: 253 TLTDQYLFPNNVETKRFIEKALTNKVKNQDED 284
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -2
Query: 196 KTERNVEKNNEKLQTVLDKYSLENNSQVRLDEEDSDDSEIKHQDEDDTCSSS 41
KT +E+N ++QT +D S D+ S +S + Q E C +S
Sbjct: 759 KTAATIEQNEHEIQTSVDPISNVKAILPNADDVSSKNSSTEDQLECLRCGNS 810
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 25.8 bits (54), Expect = 3.9
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +3
Query: 303 SLTAVSKLFCLVLYSSSNFFTLELLPIPSFGNPLFKPSSKTHALHTSCDDTKLHLMHNLW 482
SL + S L L L + F ++ +PSF +PL KP+S + + S L N
Sbjct: 425 SLDSSSLLTPLALPNKKAFQPVKFR-VPSFSSPLVKPASSS-SFGRSHSHLGTSLRSNEL 482
Query: 483 VGSDTSSFIDIVS 521
GS SS I + S
Sbjct: 483 NGSSASSSIFLQS 495
>SPAPB1E7.01c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 163
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 175 KNNEKLQTVLDKYSLENNSQVRLDEEDSDDSEIK 74
KN++ L+ L+K E N Q ++D DDS+ +
Sbjct: 104 KNHDNLKRKLNKVGDELNEQQSDTDDDDDDSKAR 137
>SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 664
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 261 ILLVFLSVILQSSKSLTAVSKLFCLVLY 344
+LLVF++V +S L AVS +F +Y
Sbjct: 355 LLLVFMAVTSAASAELIAVSSIFTYDIY 382
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = -2
Query: 325 NLETAVKDLEDCN---ITDKKTSKICKSISNGFKQ 230
N E V+D+E+CN + ++++++ KS S+GF Q
Sbjct: 423 NKEIGVQDIEECNDLFLDARRSAQVVKS-SSGFLQ 456
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 25.8 bits (54), Expect = 3.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = -2
Query: 433 KACVLLEGLNKGLPKLGIGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKICK 254
K L E +N G KL + K+ L + T K+L+ T K + K
Sbjct: 863 KCSNLQEKINFG-NKLAKEHTEKISSLEKDLEAATKTASTLSKELK----TVKSENDSLK 917
Query: 253 SISNGFKQKECNGTNCCTNKTERNVEKNNEKL 158
S+SN + KE + N + + + + NEKL
Sbjct: 918 SVSNDDQNKEKSVNNEKFKEVSQALAEANEKL 949
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 207 QFVPLHSFCLKPFDMLLQILLVFLSVILQSSKSLTAVSKLFCLVLYSSSNFF 362
Q++ ++SF +PF +L I+ V + + CL+L + FF
Sbjct: 94 QYLGIYSFSFQPFQLLNVIIASLSMVFITLGAFVLGTLDTTCLLLLAFKLFF 145
>SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 673
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 178 EKNNEKLQTVLDKYSLENNSQVRLDEED 95
E+N + LQT +D L++NS +L E D
Sbjct: 404 EQNIKSLQTDIDNLCLQSNSLKQLSEVD 431
>SPBC13G1.03c |pex14||peroxisomal membrane anchor
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 367 KVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSK 263
+ +KL + +Q+ L+ A+ DLE+ T K+TS+
Sbjct: 130 QTRKLSERTEKQQDELDIALDDLEETLNTLKRTSE 164
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 339 LYSSSNFFTLELLPIPSFGNPLFKPSSKTHA 431
L++ ++FFT + L + G P F+P K A
Sbjct: 276 LFNDNSFFTAKALNVAIPGGPKFEPLYKDEA 306
>SPAC16A10.03c |||zinc finger protein Pep5/Vps11
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 243 FDMLLQILLVFLSVILQSSKSLTAVSKLFCLVLYS 347
F +QI L+FL +L+S KS + ++ LY+
Sbjct: 573 FSQNVQIQLIFLDELLKSKKSENVLKFIYTRKLYA 607
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 25.4 bits (53), Expect = 5.2
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Frame = -2
Query: 310 VKDLEDCNITDKKTSKICKSISNGF-----KQKECNGTNCCTNKTERNVEKNNEKLQTVL 146
V D ED + D T+ ++ S + K + N + NK +++E+NN V
Sbjct: 350 VDDEEDDDFLDVTTATSLQNKSTDYGSVKRKTENLNSDSDIQNKRTKSIEENNSLPPIVS 409
Query: 145 DKYSLENNSQVRLDEEDSDDSEIKHQDEDD 56
+ +++++ +++ + DEDD
Sbjct: 410 TNGITDGDTEMQESKKNVIINGFNEDDEDD 439
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 127 NNSQVRLDEEDSDDSEIKHQDEDD 56
N+ +V +E+D DD E + +DED+
Sbjct: 199 NDDEVE-EEDDDDDDEDEDEDEDE 221
>SPCC794.03 |||amino acid permease, unknown 13|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 554
Score = 25.0 bits (52), Expect = 6.8
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +3
Query: 237 KPFDMLLQILLVFLSVILQSSKSLTAVSKLF--CLVLYSSSNFFTL-ELLPIPSFGNPLF 407
KPF ++ + +F +VIL S K+ K F V++ + F L L IP+ F
Sbjct: 459 KPFQLITFLWNLFTAVILFSPKAYPVTGKNFNYAPVIFGAITIFGLISWLSIPASRWSTF 518
Query: 408 KPSSKTHALHTSCDDT 455
+SK + S DD+
Sbjct: 519 YDASKLDS--NSFDDS 532
>SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 512
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 408 KPSSKTHALHTSCDDTKLH 464
+PSS THA+ S +D LH
Sbjct: 24 EPSSDTHAIEISSNDDYLH 42
>SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1097
Score = 25.0 bits (52), Expect = 6.8
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 463 CNFVSSQEVCKACVLLEGLNKGLPKL 386
C + +C +C + E L LPKL
Sbjct: 502 CQIILYSSICTSCSINESLKTKLPKL 527
>SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 319
Score = 25.0 bits (52), Expect = 6.8
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -2
Query: 172 NNEKLQTVLDKYSLENNSQVRLDEEDSDDSEIKHQDEDDTCSSSC 38
N ++L L + SLE S++ LDE D EI+H E + SSC
Sbjct: 66 NVQRLSKPLMECSLEELSKLELDEVQRD--EIEH--EVSSAISSC 106
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 336 VLYSSSNFFTLELLPIPSFGNPLFKPSSKTHALHTSCDDT 455
V+ S+N + LPI + NP + +HTS T
Sbjct: 1195 VVMPSANAYKKRSLPIKATANPALNGAGTWKTIHTSATTT 1234
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 129 RITRKLDLTKKTLMTQKSNIKMKTTLAPVVA 37
R+TR L++T+KT KS + T L VV+
Sbjct: 304 RLTRLLNITRKTETILKSLKESSTPLVQVVS 334
>SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 426
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 319 ETAVKDLEDCNITDKKTSKICKSISNGF 236
E + E C+++D TSK SI N F
Sbjct: 3 EELFSNSETCSLSDPLTSKTLSSIENPF 30
>SPAC4F10.09c |||ribosome biogenesis protein Noc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 24.6 bits (51), Expect = 9.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -2
Query: 238 FKQKECNGTNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVRLDEEDSD-DSEIKHQDE 62
F K G K +R+ E E + + K +++ Q+ +DEE+SD DSE +
Sbjct: 698 FNDKYIKGKQARKTKVDRDEE--GEIDEDEVWKALVDSKPQLEMDEEESDFDSEEMDKAM 755
Query: 61 DDTCSSS 41
D S S
Sbjct: 756 TDMGSDS 762
>SPCP31B10.05 |||tyrosyl-DNA phosphodiesterase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 536
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 115 VRLDEEDSDDSEIKHQDEDDTCSSSCGRLG 26
+++ E+DS E +E D C S C +G
Sbjct: 288 LKMLEKDSKKDEKTKFEESDICISQCSSMG 317
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 24.6 bits (51), Expect = 9.0
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = -2
Query: 328 NNLETAVKDLEDCNITDKKTSKICKSISNGFKQKECNGTNCCTNKTERNVEKNNEKLQTV 149
NN V +L ++TD++ +I G +Q + T+K E + E+ + K
Sbjct: 11 NNFNVLVDNLAGLSLTDEEVRRILSPRKEGSRQLPSS-----TSKDE-DSEEASHKYDFE 64
Query: 148 LDKYSLENNS 119
+D+ SL+++S
Sbjct: 65 IDRDSLKSDS 74
>SPAC688.08 |srb8|med12|mediator complex subunit Srb8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1233
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 130 LTNTYLVLFEVFHYSSQHYVQFYLYSNLYHY 222
L YLV+ FHYS + + NL H+
Sbjct: 596 LYEDYLVMLFAFHYSMFQVMTKLIADNLVHF 626
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 24.6 bits (51), Expect = 9.0
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -2
Query: 352 LDEYNTRQNNLETAVKDLE--DCNITDKKTSKICKSISNGFKQKECNGTNCCTNKTERNV 179
L+E+ +++ E +D+E IT+++T + +S S Q+E T + NV
Sbjct: 432 LEEFEEEESSEEEESEDVEYPTEEITERETIEEYQSASEPRSQREDLHAEPLTYFNQSNV 491
Query: 178 EKNNEKLQ 155
E +N +L+
Sbjct: 492 EVDNVELR 499
>SPBC887.14c |pfh1|pif1|pif1 helicase homolog
Pfh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 805
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 142 KYSLENNSQVRLDEEDSDDSEIKHQDED 59
KYS E + V +DE D DD + D D
Sbjct: 123 KYSTEIANGVYIDENDFDDDLLLENDID 150
>SPAC14C4.16 |dad3||DASH complex subunit Dad3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 86
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 376 KSSKVKKLLDEYNTRQNNLETAVKDLED 293
K + ++L EY +NLET VK L+D
Sbjct: 6 KRALQNQILAEYANLASNLETLVKVLQD 33
>SPCC364.06 |nap1||nucleosome assembly protein Nap1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 393
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = -2
Query: 145 DKYSLENNSQVRLDEEDSDDSEIKHQDEDDTCSSSC 38
D+ +E++S + + D +DS+ KH ++ C
Sbjct: 355 DEDDVESSSNEEVSDSDEEDSDSKHTAHGQQNAAEC 390
>SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 24.6 bits (51), Expect = 9.0
Identities = 28/98 (28%), Positives = 42/98 (42%)
Frame = -2
Query: 370 SKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKICKSISNGFKQKECNGTNCCTNKT 191
S++++L E TR L+ K E+ D T + + SN +Q + G
Sbjct: 191 SELEELEREDFTR---LKKVQKTKENAEKADSVTKEEHQGGSNTLQQTKDVG-GAIAPAA 246
Query: 190 ERNVEKNNEKLQTVLDKYSLENNSQVRLDEEDSDDSEI 77
E E NE + D YSL + S +E DSD+ I
Sbjct: 247 EVGKEVINEVENSKDDTYSLPSTSTDDEEENDSDEEVI 284
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,964,375
Number of Sequences: 5004
Number of extensions: 37993
Number of successful extensions: 267
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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