Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS318D04f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112936-1|AAI12937.1| 1363|Homo sapiens regulatory factor X dom... 29 9.9
AK128045-1|BAC87248.1| 1281|Homo sapiens protein ( Homo sapiens ... 29 9.9
AK126103-1|BAC86441.1| 1078|Homo sapiens protein ( Homo sapiens ... 29 9.9
AK023056-1|BAB14381.1| 852|Homo sapiens protein ( Homo sapiens ... 29 9.9
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 29 9.9
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 29 9.9
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 29 9.9
AB016090-1|BAA83716.1| 802|Homo sapiens RNA binding protein pro... 29 9.9
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 29 9.9
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 29 9.9
>BC112936-1|AAI12937.1| 1363|Homo sapiens regulatory factor X domain
containing 2 protein.
Length = 1363
Score = 29.1 bits (62), Expect = 9.9
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = -1
Query: 404 ASRFYHLIAHHRSRVH-PMSSP-PRCFPSAMTCPSSNEACGEY----QAVGSGLALPLAL 243
++ FYH I + + +H P +P P P+ P+S G ++ S LA +
Sbjct: 834 STHFYHPIHSNGTPIHTPTPTPTPTPTPTPTPTPTSEMIAGSQSLSRESPCSRLAQTTPV 893
Query: 242 LKSMGDSNHSPSGRP 198
++G S H+P G P
Sbjct: 894 DSALGSSRHTPIGTP 908
>AK128045-1|BAC87248.1| 1281|Homo sapiens protein ( Homo sapiens cDNA
FLJ46165 fis, clone TESTI4002868, weakly similar to
DNA-binding protein RFX5. ).
Length = 1281
Score = 29.1 bits (62), Expect = 9.9
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = -1
Query: 404 ASRFYHLIAHHRSRVH-PMSSP-PRCFPSAMTCPSSNEACGEY----QAVGSGLALPLAL 243
++ FYH I + + +H P +P P P+ P+S G ++ S LA +
Sbjct: 834 STHFYHPIHSNGTPIHTPTPTPTPTPTPTPTPTPTSEMIAGSQSLSRESPCSRLAQTTPV 893
Query: 242 LKSMGDSNHSPSGRP 198
++G S H+P G P
Sbjct: 894 DSALGSSRHTPIGTP 908
>AK126103-1|BAC86441.1| 1078|Homo sapiens protein ( Homo sapiens
cDNA FLJ44115 fis, clone TESTI4046819. ).
Length = 1078
Score = 29.1 bits (62), Expect = 9.9
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = -1
Query: 404 ASRFYHLIAHHRSRVH-PMSSP-PRCFPSAMTCPSSNEACGEY----QAVGSGLALPLAL 243
++ FYH I + + +H P +P P P+ P+S G ++ S LA +
Sbjct: 549 STHFYHPIHSNGTPIHTPTPTPTPTPTPTPTPTPTSEMIAGSQSLSRESPCSRLAQTTPV 608
Query: 242 LKSMGDSNHSPSGRP 198
++G S H+P G P
Sbjct: 609 DSALGSSRHTPIGTP 623
>AK023056-1|BAB14381.1| 852|Homo sapiens protein ( Homo sapiens
cDNA FLJ12994 fis, clone NT2RP3000207, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 852
Score = 29.1 bits (62), Expect = 9.9
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = -1
Query: 404 ASRFYHLIAHHRSRVH-PMSSP-PRCFPSAMTCPSSNEACGEY----QAVGSGLALPLAL 243
++ FYH I + + +H P +P P P+ P+S G ++ S LA +
Sbjct: 323 STHFYHPIHSNGTPIHTPTPTPTPTPTPTPTPTPTSEMIAGSQSLSRESPCSRLAQTTPV 382
Query: 242 LKSMGDSNHSPSGRP 198
++G S H+P G P
Sbjct: 383 DSALGSSRHTPIGTP 397
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 306 LKRGLWRVPSGRQRLGSAPGIAEVHG 229
+K GL R PS R R GS+PG+ + G
Sbjct: 1427 MKDGLPRTPSRRSRSGSSPGLRDGSG 1452
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 306 LKRGLWRVPSGRQRLGSAPGIAEVHG 229
+K GL R PS R R GS+PG+ + G
Sbjct: 459 MKDGLPRTPSRRSRSGSSPGLRDGSG 484
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 306 LKRGLWRVPSGRQRLGSAPGIAEVHG 229
+K GL R PS R R GS+PG+ + G
Sbjct: 1427 MKDGLPRTPSRRSRSGSSPGLRDGSG 1452
>AB016090-1|BAA83716.1| 802|Homo sapiens RNA binding protein
protein.
Length = 802
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 306 LKRGLWRVPSGRQRLGSAPGIAEVHG 229
+K GL R PS R R GS+PG+ + G
Sbjct: 553 MKDGLPRTPSRRSRSGSSPGLRDGSG 578
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein protein.
Length = 1262
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 306 LKRGLWRVPSGRQRLGSAPGIAEVHG 229
+K GL R PS R R GS+PG+ + G
Sbjct: 1217 MKDGLPRTPSRRSRSGSSPGLRDGSG 1242
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 306 LKRGLWRVPSGRQRLGSAPGIAEVHG 229
+K GL R PS R R GS+PG+ + G
Sbjct: 1475 MKDGLPRTPSRRSRSGSSPGLRDGSG 1500
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,809,233
Number of Sequences: 237096
Number of extensions: 1657265
Number of successful extensions: 4328
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4328
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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