Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS318D04f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S61744-1|AAB26699.1|  394|Drosophila melanogaster omb protein.         29   3.8  
S61735-1|AAB26698.1|  326|Drosophila melanogaster omb protein.         29   3.8  
S61732-1|AAB26697.1|  447|Drosophila melanogaster omb protein.         29   3.8  
M81796-1|AAA28736.1|  974|Drosophila melanogaster optomotor-blin...    29   3.8  
AE014298-631|AAF45946.2|  972|Drosophila melanogaster CG3578-PA ...    29   3.8  
BT003612-1|AAO39615.1|  521|Drosophila melanogaster GH15792p pro...    29   5.1  
BT003527-1|AAO39531.1|  729|Drosophila melanogaster RE22018p pro...    29   5.1  
AY251387-1|AAP51207.1|  729|Drosophila melanogaster tripartite m...    29   5.1  
AE014297-1059|AAF54468.3|  521|Drosophila melanogaster CG33975-P...    29   5.1  
AE014134-1916|AAF52977.3|  729|Drosophila melanogaster CG31721-P...    29   5.1  
AE014296-1409|ABI31245.1| 1876|Drosophila melanogaster CG33274-P...    28   8.8  

>S61744-1|AAB26699.1|  394|Drosophila melanogaster omb protein.
          Length = 394

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = -1

Query: 407 PASRFYHLIAHHRSRVHPMSSPPRCFPSAMTCPSSNEACGEYQAV--GSGLALP 252
           P +  +HL    + + HP   PP  FP+A     +    G +  +  G GL  P
Sbjct: 221 PPTPPHHLQQQQQQQQHPAPPPPPYFPAAALAALAGSPAGPHPGLYPGGGLRFP 274


>S61735-1|AAB26698.1|  326|Drosophila melanogaster omb protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = -1

Query: 407 PASRFYHLIAHHRSRVHPMSSPPRCFPSAMTCPSSNEACGEYQAV--GSGLALP 252
           P +  +HL    + + HP   PP  FP+A     +    G +  +  G GL  P
Sbjct: 221 PPTPPHHLQQQQQQQQHPAPPPPPYFPAAALAALAGSPAGPHPGLYPGGGLRFP 274


>S61732-1|AAB26697.1|  447|Drosophila melanogaster omb protein.
          Length = 447

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = -1

Query: 407 PASRFYHLIAHHRSRVHPMSSPPRCFPSAMTCPSSNEACGEYQAV--GSGLALP 252
           P +  +HL    + + HP   PP  FP+A     +    G +  +  G GL  P
Sbjct: 221 PPTPPHHLQQQQQQQQHPAPPPPPYFPAAALAALAGSPAGPHPGLYPGGGLRFP 274


>M81796-1|AAA28736.1|  974|Drosophila melanogaster optomotor-blind
           protein.
          Length = 974

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = -1

Query: 407 PASRFYHLIAHHRSRVHPMSSPPRCFPSAMTCPSSNEACGEYQAV--GSGLALP 252
           P +  +HL    + + HP   PP  FP+A     +    G +  +  G GL  P
Sbjct: 221 PPTPPHHLQQQQQQQQHPAPPPPPYFPAAALAALAGSPAGPHPGLYPGGGLRFP 274


>AE014298-631|AAF45946.2|  972|Drosophila melanogaster CG3578-PA
           protein.
          Length = 972

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = -1

Query: 407 PASRFYHLIAHHRSRVHPMSSPPRCFPSAMTCPSSNEACGEYQAV--GSGLALP 252
           P +  +HL    + + HP   PP  FP+A     +    G +  +  G GL  P
Sbjct: 221 PPTPPHHLQQQQQQQQHPAPPPPPYFPAAALAALAGSPAGPHPGLYPGGGLRFP 274


>BT003612-1|AAO39615.1|  521|Drosophila melanogaster GH15792p
           protein.
          Length = 521

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -1

Query: 317 TCPSSNEACGEYQAVGSGLALPLALLKSMGDSNHSPSGRP 198
           TCP++    G Y + G+G     +    +G    S S RP
Sbjct: 276 TCPAATATVGSYSSTGTGSVAASSSASPIGKHARSSSSRP 315


>BT003527-1|AAO39531.1|  729|Drosophila melanogaster RE22018p
           protein.
          Length = 729

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 241 SNARGRAKPLPTAWYSPQASFEEGHVIALGKHRGGE 348
           S+       +  AW  P  SF EG+V+ L    GGE
Sbjct: 472 SDCSAENNSVTVAWQPPNHSFVEGYVLELDDGSGGE 507


>AY251387-1|AAP51207.1|  729|Drosophila melanogaster tripartite
           motif protein 9 protein.
          Length = 729

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 241 SNARGRAKPLPTAWYSPQASFEEGHVIALGKHRGGE 348
           S+       +  AW  P  SF EG+V+ L    GGE
Sbjct: 472 SDCSAENNSVTVAWQPPNHSFVEGYVLELDDGSGGE 507


>AE014297-1059|AAF54468.3|  521|Drosophila melanogaster CG33975-PA
           protein.
          Length = 521

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -1

Query: 317 TCPSSNEACGEYQAVGSGLALPLALLKSMGDSNHSPSGRP 198
           TCP++    G Y + G+G     +    +G    S S RP
Sbjct: 276 TCPAATATVGSYSSTGTGSVAASSSASPIGKHARSSSSRP 315


>AE014134-1916|AAF52977.3|  729|Drosophila melanogaster CG31721-PA
           protein.
          Length = 729

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 241 SNARGRAKPLPTAWYSPQASFEEGHVIALGKHRGGE 348
           S+       +  AW  P  SF EG+V+ L    GGE
Sbjct: 472 SDCSAENNSVTVAWQPPNHSFVEGYVLELDDGSGGE 507


>AE014296-1409|ABI31245.1| 1876|Drosophila melanogaster CG33274-PB
            protein.
          Length = 1876

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
 Frame = +2

Query: 188  NELTAYLMVSGCCHPWTSAMPGAEPSRCLPLGTLHRPRLRRD-MS*RSGNTVEGSSLDEL 364
            N+ T Y  +    +   S  PG+  S    + TLH P    D +   S N V   +L+  
Sbjct: 1706 NQQTTYKSIESVLNFLESDNPGSTDSEVRKILTLHIPITEYDTLGSESDNDVSARALNSA 1765

Query: 365  YSGGGR*DGKNEMPVSSRTIPQS 433
                 R D ++E   SS T P S
Sbjct: 1766 KYRAQR-DTQDETSSSSETTPTS 1787


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,435,054
Number of Sequences: 53049
Number of extensions: 526009
Number of successful extensions: 1491
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)