Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS318D02f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024847-3|AAF60854.1|  195|Caenorhabditis elegans Hypothetical ...    29   2.7  
AC024847-2|AAO21415.1|  197|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z78546-7|CAB01772.1|  375|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AL023830-4|CAA19474.1|  375|Caenorhabditis elegans Hypothetical ...    28   4.7  
Z29094-1|CAA82338.1|  147|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF303257-1|AAG50215.1|  147|Caenorhabditis elegans G10 protein h...    27   8.1  

>AC024847-3|AAF60854.1|  195|Caenorhabditis elegans Hypothetical
           protein Y65B4BR.5a protein.
          Length = 195

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 511 AKVPQSINKRPKLLYKINLKQTKGISPTGTRERKNKIVI 395
           AK  +S  K  KL  K+ LKQ  G+S    R+ KN + +
Sbjct: 53  AKQSRSEKKARKLFSKLGLKQVTGVSRVCIRKSKNILFV 91


>AC024847-2|AAO21415.1|  197|Caenorhabditis elegans Hypothetical
           protein Y65B4BR.5b protein.
          Length = 197

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 511 AKVPQSINKRPKLLYKINLKQTKGISPTGTRERKNKIVI 395
           AK  +S  K  KL  K+ LKQ  G+S    R+ KN + +
Sbjct: 53  AKQSRSEKKARKLFSKLGLKQVTGVSRVCIRKSKNILFV 91


>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical
           protein F09C3.1 protein.
          Length = 1391

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 365 SYILNLLWTSTNNSRPKLAKSVQPFSSFSETNKQQFIFI 249
           +Y+ NL+     N    +   V P   F   N++QF+F+
Sbjct: 779 NYLANLIENLRENRTEMMTDVVSPIFGFLSDNREQFLFV 817


>Z78546-7|CAB01772.1|  375|Caenorhabditis elegans Hypothetical
           protein T21H8.4 protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 366 KHENARN*IKITILFFLSRVPVGLIPFVCFKFILYK 473
           ++EN +   ++T L  LS V +G+  F+   F LYK
Sbjct: 225 RNENVKTLKQVTPLLILSNVTIGVYIFIVSVFRLYK 260


>AL023830-4|CAA19474.1|  375|Caenorhabditis elegans Hypothetical
           protein T21H8.4 protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 366 KHENARN*IKITILFFLSRVPVGLIPFVCFKFILYK 473
           ++EN +   ++T L  LS V +G+  F+   F LYK
Sbjct: 225 RNENVKTLKQVTPLLILSNVTIGVYIFIVSVFRLYK 260


>Z29094-1|CAA82338.1|  147|Caenorhabditis elegans Hypothetical
           protein C07A9.2 protein.
          Length = 147

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = -3

Query: 207 LYYMHFSNTQLWMANQLVCLSAHIAARKLMATSLKYCYESVTKSECIGSRHS 52
           +Y M++   ++       CL+A  A   L+A   K  YE++   +C+ +R S
Sbjct: 63  VYDMYYKKAEISRELYEFCLTAKFADAALIAKWKKQGYENLCCVKCVNTRDS 114


>AF303257-1|AAG50215.1|  147|Caenorhabditis elegans G10 protein
           homolog protein.
          Length = 147

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = -3

Query: 207 LYYMHFSNTQLWMANQLVCLSAHIAARKLMATSLKYCYESVTKSECIGSRHS 52
           +Y M++   ++       CL+A  A   L+A   K  YE++   +C+ +R S
Sbjct: 63  VYDMYYKKAEISRELYEFCLTAKFADAALIAKWKKQGYENLCCVKCVNTRDS 114


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,185,695
Number of Sequences: 27780
Number of extensions: 219526
Number of successful extensions: 543
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)