Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS318C12f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK096715-1|BAC04849.1|  161|Homo sapiens protein ( Homo sapiens ...    31   2.4  
BC043352-1|AAH43352.1| 1013|Homo sapiens zinc finger and BTB dom...    29   9.9  
AY598328-1|AAT06739.1|  596|Homo sapiens L9 protein.                   29   9.9  
AY302699-1|AAP59447.1| 1013|Homo sapiens KAISO-like zinc finger ...    29   9.9  
AK128103-1|BAC87277.1|  144|Homo sapiens protein ( Homo sapiens ...    29   9.9  
AF061258-1|AAC15767.1|  596|Homo sapiens LIM protein protein.          29   9.9  
AB040971-1|BAA96062.2| 1029|Homo sapiens KIAA1538 protein protein.     29   9.9  

>AK096715-1|BAC04849.1|  161|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39396 fis, clone PLACE6008640. ).
          Length = 161

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = -2

Query: 421 GQPGRPG*TVAGWRRA-CPG*RQPCAALSPGSPHCLW 314
           GQP  P    A    + CP  R  C    PG P CLW
Sbjct: 8   GQPPHPNAVAAALHASLCPANRGTCPLGKPGYPGCLW 44


>BC043352-1|AAH43352.1| 1013|Homo sapiens zinc finger and BTB domain
           containing 4 protein.
          Length = 1013

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +1

Query: 226 SAWSPPASTSERRLSNSSDGSACSGYSKTTTDSADFLATRPHTAAVIPGKPAA 384
           +A S  +S+S    S+SS  S+ S  S ++   A   A+ P     +PG PAA
Sbjct: 82  TAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSPPRVLELPGVPAA 134


>AY598328-1|AAT06739.1|  596|Homo sapiens L9 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +2

Query: 272 TPQMAALVAVIRKLPQTV--RTSWRQGRTRLPSSRASPP 382
           +PQ+A+LVA  R +P+++   TS R G T L ++ A  P
Sbjct: 313 SPQLASLVASTRSMPESLDSPTSGRPGVTSLTTAAAFKP 351


>AY302699-1|AAP59447.1| 1013|Homo sapiens KAISO-like zinc finger
           protein 1 protein.
          Length = 1013

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +1

Query: 226 SAWSPPASTSERRLSNSSDGSACSGYSKTTTDSADFLATRPHTAAVIPGKPAA 384
           +A S  +S+S    S+SS  S+ S  S ++   A   A+ P     +PG PAA
Sbjct: 82  TAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSPPRVLELPGVPAA 134


>AK128103-1|BAC87277.1|  144|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46224 fis, clone TESTI4014262. ).
          Length = 144

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = +1

Query: 346 PH--TAAVIPGKPAANPLQFIRVGPADLGS 429
           PH  T  ++PG PA+ PL + ++ P  +GS
Sbjct: 77  PHNRTRPLLPGSPASGPLNYNKIAPPWVGS 106


>AF061258-1|AAC15767.1|  596|Homo sapiens LIM protein protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +2

Query: 272 TPQMAALVAVIRKLPQTV--RTSWRQGRTRLPSSRASPP 382
           +PQ+A+LVA  R +P+++   TS R G T L ++ A  P
Sbjct: 313 SPQLASLVASTRSMPESLDSPTSGRPGVTSLTTAAAFKP 351


>AB040971-1|BAA96062.2| 1029|Homo sapiens KIAA1538 protein protein.
          Length = 1029

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +1

Query: 226 SAWSPPASTSERRLSNSSDGSACSGYSKTTTDSADFLATRPHTAAVIPGKPAA 384
           +A S  +S+S    S+SS  S+ S  S ++   A   A+ P     +PG PAA
Sbjct: 98  TAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSPPRVLELPGVPAA 150


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,266,616
Number of Sequences: 237096
Number of extensions: 1348710
Number of successful extensions: 5610
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5607
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)