Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS318C01f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D30612-1|BAA24380.1|  718|Homo sapiens repressor protein protein.      29   7.5  
BC073805-1|AAH73805.1|  671|Homo sapiens zinc finger protein 282...    29   7.5  
BC055287-1|AAH55287.1|  643|Homo sapiens ZNF282 protein protein.       29   7.5  
BC041704-1|AAH41704.1|  622|Homo sapiens Similar to expressed se...    29   7.5  

>D30612-1|BAA24380.1|  718|Homo sapiens repressor protein protein.
          Length = 718

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 142 GADSTPY-CPCCDTRTGHRRSDLLHTDNTTRTKRNTLFCVHC 264
           GA S PY CP C    G R+S ++H  + + TK     C  C
Sbjct: 559 GARSKPYSCPECGKSFGVRKSLIIH--HRSHTKERPYECAEC 598


>BC073805-1|AAH73805.1|  671|Homo sapiens zinc finger protein 282
           protein.
          Length = 671

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 142 GADSTPY-CPCCDTRTGHRRSDLLHTDNTTRTKRNTLFCVHC 264
           GA S PY CP C    G R+S ++H  + + TK     C  C
Sbjct: 512 GARSKPYSCPECGKSFGVRKSLIIH--HRSHTKERPYECAEC 551


>BC055287-1|AAH55287.1|  643|Homo sapiens ZNF282 protein protein.
          Length = 643

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 142 GADSTPY-CPCCDTRTGHRRSDLLHTDNTTRTKRNTLFCVHC 264
           GA S PY CP C    G R+S ++H  + + TK     C  C
Sbjct: 484 GARSKPYSCPECGKSFGVRKSLIIH--HRSHTKERPYECAEC 523


>BC041704-1|AAH41704.1|  622|Homo sapiens Similar to expressed
           sequence AI449432 protein.
          Length = 622

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 142 GADSTPY-CPCCDTRTGHRRSDLLHTDNTTRTKRNTLFCVHC 264
           GA S PY CP C    G R+S ++H  + + TK     C  C
Sbjct: 463 GARSKPYSCPECGKSFGVRKSLIIH--HRSHTKERPYECAEC 502


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,042,305
Number of Sequences: 237096
Number of extensions: 1280418
Number of successful extensions: 2870
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2870
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)