Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS318C01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004506-1|AAO42670.1| 1545|Drosophila melanogaster AT10293p pro...    28   6.7  
AY094719-1|AAM11072.1|  237|Drosophila melanogaster GH18470p pro...    28   6.7  
AF495912-1|AAN60444.1| 2576|Drosophila melanogaster nesprin prot...    28   6.7  
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    28   6.7  

>BT004506-1|AAO42670.1| 1545|Drosophila melanogaster AT10293p protein.
          Length = 1545

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 165  PVLRYPHGPPP 197
            P+L YPHGPPP
Sbjct: 1534 PMLSYPHGPPP 1544


>AY094719-1|AAM11072.1|  237|Drosophila melanogaster GH18470p
           protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 165 PVLRYPHGPPP 197
           P+L YPHGPPP
Sbjct: 226 PMLSYPHGPPP 236


>AF495912-1|AAN60444.1| 2576|Drosophila melanogaster nesprin protein.
          Length = 2576

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 165  PVLRYPHGPPP 197
            P+L YPHGPPP
Sbjct: 2565 PMLSYPHGPPP 2575


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
             isoform D protein.
          Length = 11707

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 165   PVLRYPHGPPP 197
             P+L YPHGPPP
Sbjct: 11696 PMLSYPHGPPP 11706


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,662,239
Number of Sequences: 53049
Number of extensions: 422898
Number of successful extensions: 1191
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)