Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS318B12f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 98 6e-22
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 73 2e-14
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 53 2e-08
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 47 1e-06
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 38 0.001
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 36 0.004
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 28 0.97
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 27 1.3
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 1.7
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 25 5.2
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 25 5.2
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 25 5.2
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 25 5.2
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 25 5.2
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 25 5.2
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 25 5.2
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 25 5.2
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 25 5.2
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 25 5.2
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 25 5.2
SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces pomb... 25 6.8
SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 25 9.0
SPAC26A3.14c ||SPAC23A6.14c|DUF1748 family protein|Schizosacchar... 25 9.0
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 98.3 bits (234), Expect = 6e-22
Identities = 51/126 (40%), Positives = 76/126 (60%), Gaps = 1/126 (0%)
Frame = +1
Query: 145 AVATIQKKTATTNPGPGGVRKKSGPKFELTEEQKRDIKEAFDLFDTENTGKIDTKELKVA 324
A A ++++ ++P P + + + E+TEEQ++DI EAF LFD++ ID EL+ A
Sbjct: 3 ANARAKRRSRASSPTPARLGGYAPLRVEITEEQRQDINEAFKLFDSDKDNAIDYHELRAA 62
Query: 325 IRALGFE-PXXXXXXXXXXXXXXGDGKVSFDDFMELMSVKMAEKDTREEIMKAFKLFDDD 501
+RALGF G G + +DF+ +M+ K+ E+D EEI +AF+LFDDD
Sbjct: 63 MRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRVMTEKIVERDPLEEIKRAFELFDDD 122
Query: 502 ETGKIS 519
ETGKIS
Sbjct: 123 ETGKIS 128
Score = 31.5 bits (68), Expect = 0.079
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 250 DIKEAFDLFDTENTGKIDTKELKVAIRAL 336
+IK AF+LFD + TGKI + L+ + L
Sbjct: 111 EIKRAFELFDDDETGKISLRNLRRVAKEL 139
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 73.3 bits (172), Expect = 2e-14
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +1
Query: 229 LTEEQKRDIKEAFDLFDTENTGKIDTKELKVAIRALGFEPXXXXXXXXXXXXXX-GDGKV 405
LT+EQ + +EAF LFD + G I + EL V +R+LG P G+G +
Sbjct: 6 LTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTI 65
Query: 406 SFDDFMELMSVKMAEKDTREEIMKAFKLFDDDETGKIS 519
F +F+ +M+ KM + D EE+ +AFK+FD D G I+
Sbjct: 66 DFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYIT 103
Score = 34.3 bits (75), Expect = 0.011
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 238 EQKRDIKEAFDLFDTENTGKIDTKELKVAIRALGFE-PXXXXXXXXXXXXXXGDGKVSFD 414
+ + +++EAF +FD + G I +EL + +LG GDG ++++
Sbjct: 82 DNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYE 141
Query: 415 DFMELMSVK 441
+F ++S K
Sbjct: 142 EFSRVISSK 150
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 53.2 bits (122), Expect = 2e-08
Identities = 31/95 (32%), Positives = 49/95 (51%)
Frame = +1
Query: 232 TEEQKRDIKEAFDLFDTENTGKIDTKELKVAIRALGFEPXXXXXXXXXXXXXXGDGKVSF 411
++EQ ++KEAF L+D + G I T + +R+LG GD +
Sbjct: 4 SKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGIN--VTDAELAKLSNELGDA-IDE 60
Query: 412 DDFMELMSVKMAEKDTREEIMKAFKLFDDDETGKI 516
FM +S K+ E ++ EE +KAF++FD D +G I
Sbjct: 61 KKFMSFVSNKLRETESEEEYIKAFRVFDKDNSGYI 95
Score = 28.7 bits (61), Expect = 0.56
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 220 KFELTEEQKRDIKEAFDLFDTENTGKIDTKELKVAIRALG 339
K TE ++ IK AF +FD +N+G I+T + ++ LG
Sbjct: 70 KLRETESEEEYIK-AFRVFDKDNSGYIETAKFADYMKTLG 108
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 47.2 bits (107), Expect = 1e-06
Identities = 27/105 (25%), Positives = 49/105 (46%)
Frame = +1
Query: 202 RKKSGPKFELTEEQKRDIKEAFDLFDTENTGKIDTKELKVAIRALGFEPXXXXXXXXXXX 381
R SG +LT Q +++KEAF L D + G I +++K + +L +
Sbjct: 33 RASSGAFAQLTSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFES 92
Query: 382 XXXGDGKVSFDDFMELMSVKMAEKDTREEIMKAFKLFDDDETGKI 516
+ ++ F+ M + R ++++AF FDD ++GKI
Sbjct: 93 I---NPPINLAAFLTAMGSMLCRISPRNDLLEAFSTFDDTQSGKI 134
Score = 28.3 bits (60), Expect = 0.73
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 244 KRDIKEAFDLFDTENTGKIDTKELKVAIRALG 339
+ D+ EAF FD +GKI ++ A+ ++G
Sbjct: 116 RNDLLEAFSTFDDTQSGKIPISTMRDALSSMG 147
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 37.5 bits (83), Expect = 0.001
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +1
Query: 256 KEAFDLFDTENTGKIDTKELKVAIRALGFEPXXXXXXXXXXXXXXGDGKVSFDDFMELMS 435
K+AF LFD TG+I + +RA G P +V + F+++++
Sbjct: 9 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTL---PAEVDMEQFLQVLN 65
Query: 436 VK--MAEKDTREEIMKAFKLFDDDETGKI 516
EE +K F++FD D TG I
Sbjct: 66 RPNGFDMPGDPEEFVKGFQVFDKDATGMI 94
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 35.9 bits (79), Expect = 0.004
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +1
Query: 238 EQKRDIKEAFDLFDTENTGKIDTKELKVAIRALGFEPXXXXXXXXXXXXXXGDGKVSFDD 417
E + +EAFDLFD + G ID ++L+ + LG E +GKVS ++
Sbjct: 9 EMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLG-ENLTKEQLQLMLDLAGTNGKVSREE 67
Query: 418 FMEL 429
F EL
Sbjct: 68 FAEL 71
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.9 bits (59), Expect = 0.97
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -3
Query: 96 EAFIAALYNAKLYLQLNA--LIYKNKQHFKLFYF 1
++FIA L+ Y+QLN ++Y+ H ++ YF
Sbjct: 213 QSFIAPLFQGFYYMQLNVYYVLYEKMSHCEIQYF 246
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = -1
Query: 500 SSSNSLNAFMISSLVSFSAIFTDM---SSIKSSNDTF 399
+S NSLN+++ SSL+S +IF +SI SS +F
Sbjct: 17 ASKNSLNSYLASSLMSHDSIFDGPGLGTSIPSSVSSF 53
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 1.7
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 4/44 (9%)
Frame = -1
Query: 512 LPVSSSSN-SLNAFMISSLVSFSAI---FTDMSSIKSSNDTFPS 393
+P SSSS+ S + ISS +S S+I F+ +SSI SS+ + PS
Sbjct: 545 IPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSSTSSPS 588
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 248 ETSKKHLIYLIQKILEKSTPK 310
+TS +HLI L KIL K P+
Sbjct: 25 QTSDEHLINLFAKILSKHVPE 45
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 248 ETSKKHLIYLIQKILEKSTPK 310
+TS +HLI L KIL K P+
Sbjct: 25 QTSDEHLINLFAKILSKHVPE 45
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 248 ETSKKHLIYLIQKILEKSTPK 310
+TS +HLI L KIL K P+
Sbjct: 25 QTSDEHLINLFAKILSKHVPE 45
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 248 ETSKKHLIYLIQKILEKSTPK 310
+TS +HLI L KIL K P+
Sbjct: 25 QTSDEHLINLFAKILSKHVPE 45
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 248 ETSKKHLIYLIQKILEKSTPK 310
+TS +HLI L KIL K P+
Sbjct: 25 QTSDEHLINLFAKILSKHVPE 45
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 248 ETSKKHLIYLIQKILEKSTPK 310
+TS +HLI L KIL K P+
Sbjct: 25 QTSDEHLINLFAKILSKHVPE 45
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 248 ETSKKHLIYLIQKILEKSTPK 310
+TS +HLI L KIL K P+
Sbjct: 25 QTSDEHLINLFAKILSKHVPE 45
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 248 ETSKKHLIYLIQKILEKSTPK 310
+TS +HLI L KIL K P+
Sbjct: 25 QTSDEHLINLFAKILSKHVPE 45
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 248 ETSKKHLIYLIQKILEKSTPK 310
+TS +HLI L KIL K P+
Sbjct: 25 QTSDEHLINLFAKILSKHVPE 45
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 248 ETSKKHLIYLIQKILEKSTPK 310
+TS +HLI L KIL K P+
Sbjct: 25 QTSDEHLINLFAKILSKHVPE 45
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 248 ETSKKHLIYLIQKILEKSTPK 310
+TS +HLI L KIL K P+
Sbjct: 25 QTSDEHLINLFAKILSKHVPE 45
>SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 141 CHDLFMNICWFIKDQEAFIAALYNAKLYLQLNALIYKNKQH 19
C DL+ W I++ F Y KL+ L + YKN+ H
Sbjct: 334 CRDLWK---WTIENPFGFQIDNYKWKLFNTLGIMDYKNRLH 371
>SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 707
Score = 24.6 bits (51), Expect = 9.0
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 196 GVRKKSGPKFELTEEQKRDIKEAFDLFDTENTGKIDTKELKVAIRALGFE 345
G+R+K K E KRD+++ ++E+T D A GFE
Sbjct: 31 GIRQKHSKKEGKDETLKRDVEKFIQNVNSEDTPSEDDSMSMDAFLEGGFE 80
>SPAC26A3.14c ||SPAC23A6.14c|DUF1748 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 73
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 196 GVRKKSGPKFELTEEQKRDIKEAFDLF 276
G+R+ SG FE+ + D+K A + +
Sbjct: 23 GIRRSSGISFEVEKIHNEDVKTAVEKY 49
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,092,390
Number of Sequences: 5004
Number of extensions: 39891
Number of successful extensions: 158
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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