Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS318B04f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC188.02 |par1||protein phosphatase regulatory subunit Par1 |S... 113 2e-26
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 100 1e-22
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 30 0.24
SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit |Sch... 29 0.42
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 2.2
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 27 2.2
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 26 3.0
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 25 5.2
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 25 9.0
>SPCC188.02 |par1||protein phosphatase regulatory subunit Par1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 548
Score = 113 bits (271), Expect = 2e-26
Identities = 49/86 (56%), Positives = 68/86 (79%)
Frame = -1
Query: 521 LFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVIMPIMFPALYRISKEHWNQTI 342
LF ++A +SS +FQVAERALYF+NN+Y + L+EEN +I+PI++PAL+ ISK HWN+ I
Sbjct: 406 LFHKLATSISSQNFQVAERALYFFNNDYFVHLVEENVDIILPIIYPALFEISKSHWNRVI 465
Query: 341 VALVYNVLKTFMEMNSKLFDELTASY 264
++V NVLK FM++N LFDE+ A Y
Sbjct: 466 HSMVCNVLKLFMDINPSLFDEVDAEY 491
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 100 bits (240), Expect = 1e-22
Identities = 42/86 (48%), Positives = 63/86 (73%)
Frame = -1
Query: 521 LFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVIMPIMFPALYRISKEHWNQTI 342
LF+Q+A+ +SS HFQVAERAL W+NEY SL+ +N ++PI++P+LY+ + EHWN TI
Sbjct: 507 LFQQLARSISSMHFQVAERALCLWSNEYFTSLVSQNVVTLLPIIYPSLYKTANEHWNSTI 566
Query: 341 VALVYNVLKTFMEMNSKLFDELTASY 264
A+ NVL+ F++M++ F+ L Y
Sbjct: 567 QAIACNVLQIFVDMDADFFNGLVEDY 592
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 29.9 bits (64), Expect = 0.24
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 178 SDSNTRRRSPSDSLADRAPTRASI 107
SD+N +SPSDS DR P +SI
Sbjct: 911 SDANKHHQSPSDSETDRTPDSSSI 934
>SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 29.1 bits (62), Expect = 0.42
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 452 WNNEYIMSLMEENNHVIMPIMFPALYRISK 363
W +E IMS M EN MP+ Y I K
Sbjct: 103 WTDEKIMSFMNENYSWFMPVFHSYPYNIQK 132
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 26.6 bits (56), Expect = 2.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 408 MVVLFHQRHYILVIPEIQSPLSYL 479
MV+L + + + L +P+ SPLSY+
Sbjct: 113 MVILRYIQSWALAVPDTNSPLSYI 136
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 26.6 bits (56), Expect = 2.2
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 306 HECFEHIVDEGHDCLVPVLLADSVQRWEHYRHDHMVVLFHQRHYIL 443
HE ++ DE ++C + VL++ + +H R+D L H R+ ++
Sbjct: 247 HETYQLNGDE-NECRIDVLVSTPGRLVDHIRNDESFSLQHLRYMVI 291
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 350 GSSAPC*FGTTLGTL*A*SHGCSLPSTTLYTRYSRNTKPSQLPENEDWKHILQ 508
G PC + T +G SH L + +YT + RNT L + W++ ++
Sbjct: 79 GEKPPCSYATLIGLAILQSHNKQLTLSGIYT-WIRNTFRYYLNHDGGWQNSIR 130
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 25.4 bits (53), Expect = 5.2
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = -3
Query: 453 LE*RVYNVVDGREQPCD--HAYNVPSVVPNQQGALEPNNRGPRLQCAQNIHGNEFQ 292
+E V+ VV R P +V NQ P +G R+ CA+N EFQ
Sbjct: 408 MEGNVFGVVCPRNTPIPTIKKRTFTTVADNQTTVTFPVYQGERVNCAENEPLGEFQ 463
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
Frame = -3
Query: 402 HAYNVPSVVPNQ-----QGALEPNNRGPRLQCAQNIH 307
H Y+ PS Q QG +PN+R +C ++H
Sbjct: 675 HPYSRPSSTRPQCQLEDQGICDPNDRFVHFECGHSVH 711
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,726,379
Number of Sequences: 5004
Number of extensions: 29074
Number of successful extensions: 104
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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