Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS318A05f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000104-1|AAH00104.1| 188|Homo sapiens transmembrane and coile... 214 2e-55
AY763589-1|AAV34755.1| 188|Homo sapiens xenogeneic cross-immune... 214 2e-55
AY359027-1|AAQ89386.1| 188|Homo sapiens STMF151 protein. 214 2e-55
AL451074-8|CAH74064.1| 188|Homo sapiens transmembrane and coile... 214 2e-55
AF070626-1|AAC25388.1| 230|Homo sapiens unknown protein. 214 2e-55
AB020980-1|BAA86974.1| 188|Homo sapiens membrane protein protein. 214 2e-55
AF277194-1|AAK07549.1| 149|Homo sapiens PNAS-136 protein. 175 8e-44
AF274935-1|AAK07514.1| 130|Homo sapiens PNAS-10 protein. 161 1e-39
BC131628-1|AAI31629.1| 828|Homo sapiens KIAA1553 protein. 29 9.9
AL355586-3|CAI16110.1| 828|Homo sapiens RP11-59I9.2 protein. 29 9.9
>BC000104-1|AAH00104.1| 188|Homo sapiens transmembrane and
coiled-coil domains 1 protein.
Length = 188
Score = 214 bits (522), Expect = 2e-55
Identities = 105/158 (66%), Positives = 120/158 (75%), Gaps = 1/158 (0%)
Frame = +2
Query: 2 SICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKK*-KRKEAHGDSLDXXXXXXXXXXXX 178
S+CTA L EG+TWVLVYRT+KY++LK EVE+QSKK K+KE +S
Sbjct: 15 SVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGRQQKKKIERQEE 74
Query: 179 XXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLP 358
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S+IQGLSHRNL
Sbjct: 75 KLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLSYIQGLSHRNLL 134
Query: 359 GDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRGGAR 472
GDD TDCSFIFLYILCTMSIRQNIQK+LG APSR +
Sbjct: 135 GDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATK 172
>AY763589-1|AAV34755.1| 188|Homo sapiens xenogeneic cross-immune
protein protein.
Length = 188
Score = 214 bits (522), Expect = 2e-55
Identities = 105/158 (66%), Positives = 120/158 (75%), Gaps = 1/158 (0%)
Frame = +2
Query: 2 SICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKK*-KRKEAHGDSLDXXXXXXXXXXXX 178
S+CTA L EG+TWVLVYRT+KY++LK EVE+QSKK K+KE +S
Sbjct: 15 SVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGRQQKKKIERQEE 74
Query: 179 XXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLP 358
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S+IQGLSHRNL
Sbjct: 75 KLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLSYIQGLSHRNLL 134
Query: 359 GDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRGGAR 472
GDD TDCSFIFLYILCTMSIRQNIQK+LG APSR +
Sbjct: 135 GDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATK 172
>AY359027-1|AAQ89386.1| 188|Homo sapiens STMF151 protein.
Length = 188
Score = 214 bits (522), Expect = 2e-55
Identities = 105/158 (66%), Positives = 120/158 (75%), Gaps = 1/158 (0%)
Frame = +2
Query: 2 SICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKK*-KRKEAHGDSLDXXXXXXXXXXXX 178
S+CTA L EG+TWVLVYRT+KY++LK EVE+QSKK K+KE +S
Sbjct: 15 SVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGRQQKKKIERQEE 74
Query: 179 XXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLP 358
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S+IQGLSHRNL
Sbjct: 75 KLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLSYIQGLSHRNLL 134
Query: 359 GDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRGGAR 472
GDD TDCSFIFLYILCTMSIRQNIQK+LG APSR +
Sbjct: 135 GDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATK 172
>AL451074-8|CAH74064.1| 188|Homo sapiens transmembrane and
coiled-coil domains 1 protein.
Length = 188
Score = 214 bits (522), Expect = 2e-55
Identities = 105/158 (66%), Positives = 120/158 (75%), Gaps = 1/158 (0%)
Frame = +2
Query: 2 SICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKK*-KRKEAHGDSLDXXXXXXXXXXXX 178
S+CTA L EG+TWVLVYRT+KY++LK EVE+QSKK K+KE +S
Sbjct: 15 SVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGRQQKKKIERQEE 74
Query: 179 XXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLP 358
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S+IQGLSHRNL
Sbjct: 75 KLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLSYIQGLSHRNLL 134
Query: 359 GDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRGGAR 472
GDD TDCSFIFLYILCTMSIRQNIQK+LG APSR +
Sbjct: 135 GDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATK 172
>AF070626-1|AAC25388.1| 230|Homo sapiens unknown protein.
Length = 230
Score = 214 bits (522), Expect = 2e-55
Identities = 105/158 (66%), Positives = 120/158 (75%), Gaps = 1/158 (0%)
Frame = +2
Query: 2 SICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKK*-KRKEAHGDSLDXXXXXXXXXXXX 178
S+CTA L EG+TWVLVYRT+KY++LK EVE+QSKK K+KE +S
Sbjct: 57 SVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGRQQKKKIERQEE 116
Query: 179 XXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLP 358
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S+IQGLSHRNL
Sbjct: 117 KLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLSYIQGLSHRNLL 176
Query: 359 GDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRGGAR 472
GDD TDCSFIFLYILCTMSIRQNIQK+LG APSR +
Sbjct: 177 GDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATK 214
>AB020980-1|BAA86974.1| 188|Homo sapiens membrane protein protein.
Length = 188
Score = 214 bits (522), Expect = 2e-55
Identities = 105/158 (66%), Positives = 120/158 (75%), Gaps = 1/158 (0%)
Frame = +2
Query: 2 SICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKK*-KRKEAHGDSLDXXXXXXXXXXXX 178
S+CTA L EG+TWVLVYRT+KY++LK EVE+QSKK K+KE +S
Sbjct: 15 SVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGRQQKKKIERQEE 74
Query: 179 XXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLP 358
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S+IQGLSHRNL
Sbjct: 75 KLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLSYIQGLSHRNLL 134
Query: 359 GDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRGGAR 472
GDD TDCSFIFLYILCTMSIRQNIQK+LG APSR +
Sbjct: 135 GDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATK 172
>AF277194-1|AAK07549.1| 149|Homo sapiens PNAS-136 protein.
Length = 149
Score = 175 bits (426), Expect = 8e-44
Identities = 87/135 (64%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
Frame = +2
Query: 2 SICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKK*-KRKEAHGDSLDXXXXXXXXXXXX 178
S+CTA L EG+TWVLVYRT+KY++LK EVE+QSKK K+KE +S
Sbjct: 15 SVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGRQQKKKIERQEE 74
Query: 179 XXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLP 358
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S+IQGL HRNL
Sbjct: 75 KLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLSYIQGLPHRNLL 134
Query: 359 GDDYTDCSFIFLYIL 403
GDD TDCSFIFLYIL
Sbjct: 135 GDDTTDCSFIFLYIL 149
>AF274935-1|AAK07514.1| 130|Homo sapiens PNAS-10 protein.
Length = 130
Score = 161 bits (391), Expect = 1e-39
Identities = 86/135 (63%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Frame = +2
Query: 2 SICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKK*-KRKEAHGDSLDXXXXXXXXXXXX 178
S+CTA L EG+TWVLVYRT+KY++LK EVE+QSKK K+KE +S
Sbjct: 15 SVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR----------- 63
Query: 179 XXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLP 358
LS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S+IQGL HRNL
Sbjct: 64 --------LSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLSYIQGLPHRNLL 115
Query: 359 GDDYTDCSFIFLYIL 403
GDD TDCSFIFLYIL
Sbjct: 116 GDDTTDCSFIFLYIL 130
>BC131628-1|AAI31629.1| 828|Homo sapiens KIAA1553 protein.
Length = 828
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +1
Query: 304 TSILSYFMDSRSEP*EFTW**LHRLFFHIFVHSVYNE 414
T L+ F+D S P EF LHRLF +F H E
Sbjct: 394 TQDLTEFLDEASSPGEFAVFLLHRLFPELFDHRKLGE 430
>AL355586-3|CAI16110.1| 828|Homo sapiens RP11-59I9.2 protein.
Length = 828
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +1
Query: 304 TSILSYFMDSRSEP*EFTW**LHRLFFHIFVHSVYNE 414
T L+ F+D S P EF LHRLF +F H E
Sbjct: 394 TQDLTEFLDEASSPGEFAVFLLHRLFPELFDHRKLGE 430
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,787,962
Number of Sequences: 237096
Number of extensions: 1243662
Number of successful extensions: 2343
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2336
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -