Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS317G04f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.08 |tbp1|tdf1, tbp, SPAC30.12|TATA-binding protein |Sch... 75 9e-15
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 36 0.004
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 33 0.034
SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces... 31 0.079
SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 31 0.10
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 30 0.24
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.42
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 29 0.56
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 27 1.3
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 27 1.3
SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synth... 27 2.2
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 26 3.0
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 26 3.0
SPAC22E12.14c |sck2||serine/threonine protein kinase Sck2|Schizo... 26 3.9
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 25 5.2
SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe... 25 6.8
SPAC14C4.06c |||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 6.8
SPBP18G5.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 9.0
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 25 9.0
SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|c... 25 9.0
>SPAC29E6.08 |tbp1|tdf1, tbp, SPAC30.12|TATA-binding protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 74.5 bits (175), Expect = 9e-15
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +1
Query: 322 LQNCVATVSLGCELKLLDIYCRTRYSEYNPARFQGVVMKILDPRATALVFRSGKIVCTGT 501
LQN VATV+L C L L I R +EYNP RF V+M+I +P++TAL+F SGK+V G
Sbjct: 58 LQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKSTALIFASGKMVVLGG 117
Query: 502 RNEHDS 519
++E DS
Sbjct: 118 KSEDDS 123
Score = 46.0 bits (104), Expect = 3e-06
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 310 SSIKLQNCVATVSLGCELKLLDI-YCRTRYSEYNPARFQGVVMKILDPRATALVFRSGKI 486
+ K+QN V + + ++L + Y +S Y P F G++ +++ P+ L+F SGKI
Sbjct: 144 TDFKIQNIVGSCDVKFPIRLEGLAYSHGTFSSYEPELFPGLIYRMVKPKVVLLIFVSGKI 203
Query: 487 VCTGTR 504
V TG +
Sbjct: 204 VLTGAK 209
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 35.9 bits (79), Expect = 0.004
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +1
Query: 109 STPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMP 288
STP T I N S S +SS +++ + T T++ + P N+ + +P
Sbjct: 538 STPSTTIPTSNSSVSLQTSSSLIISSPIISSSLTATSTSTPALTHSITPSNTSYTSSLIP 597
Query: 289 SASTQAKSSI 318
S+ST SS+
Sbjct: 598 SSSTDYSSSL 607
Score = 28.7 bits (61), Expect = 0.56
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 91 SISEMYSTPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQPLNPHNSMT 270
S ++ S + + +NF+ + +S TN S + + +NSS + L +S+
Sbjct: 504 SFTKFSSLSSSQLSTENFTSASSSLSLTNAKSSLSTPSTTIPTSNSSVS---LQTSSSLI 560
Query: 271 ALTPMPSASTQAKSS 315
+P+ S+S A S+
Sbjct: 561 ISSPIISSSLTATST 575
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 32.7 bits (71), Expect = 0.034
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 55 SQENRVEKEHEGSISEMYSTPKTPIKAQNFSKEDA-GVSGTNLSSQVVNGDVALTPTNSS 231
SQ++ S +T +T AQ + E+ SG NL++ + ++ T ++SS
Sbjct: 256 SQQSTESTSSSASAYSYITTLQTATTAQQTTSENTYSTSGPNLTTSNTSPQISSTISSSS 315
Query: 232 FTPQPLNPHNSMTALTPMPSASTQAKSSI 318
F + + S ++ T + +AST A ++I
Sbjct: 316 FIVESPSVALSTSSTTTITNASTPAANTI 344
Score = 26.6 bits (56), Expect = 2.2
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Frame = +1
Query: 109 STPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVA--LTPTNSSFTPQPLNPHNSMTAL-- 276
STP T N S S N S+ + + V TP SS P S+TAL
Sbjct: 2517 STPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSLTALNS 2576
Query: 277 -TPMPSASTQAKSSIKLQNCVATVS 348
TP+ S+S S+ + V S
Sbjct: 2577 STPITSSSVLNSSTPITSSTVVNTS 2601
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSIKLQNCVA 339
SS VVN +T + + T P+ + + + TP+ S ST SS + + A
Sbjct: 3374 SSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS-STVVNSSTPITSSTA 3425
Score = 26.6 bits (56), Expect = 2.2
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +1
Query: 109 STPKTPIKAQNFSKEDAGVSGTN-----LSSQVVNGDVALTPTNSSFTPQPLNPHNSMTA 273
STP T A N S S N SS VVN +T + + T P+ + +
Sbjct: 3381 STPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSTVVNS 3440
Query: 274 LTPMPSASTQAKSS 315
TP+ S+S S+
Sbjct: 3441 STPITSSSVLNSST 3454
Score = 25.8 bits (54), Expect = 3.9
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +1
Query: 109 STPKTPIKAQNFSKEDAGVSGTN-----LSSQVVNGDVALTPTNSSFTPQPLNPHNSMTA 273
STP T + A N S S N SS VVN +T + + P+ ++
Sbjct: 2565 STPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNT 2624
Query: 274 LTPMPSASTQAKSS 315
TP+ S+S S+
Sbjct: 2625 STPITSSSVLNSST 2638
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSS 315
SS VVN +T + + T P+ + + TP+ S+S S+
Sbjct: 3026 SSTVVNSSTPITSSTALNTSTPITSSTVLNSSTPITSSSVLNSST 3070
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSIKLQNCVATVS 348
SS VVN +T + T P+ + + + TP+ S+S S+ + V S
Sbjct: 1514 SSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTS 1569
Score = 25.4 bits (53), Expect = 5.2
Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Frame = +1
Query: 109 STPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVA--LTPTNSSFTPQPLNPHNSMTAL-- 276
STP T A N S S N S+ + + V TP SS P S T L
Sbjct: 2469 STPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNS 2528
Query: 277 -TPMPSASTQAKSSIKLQNCVATVS 348
TP+ S+S S+ + V S
Sbjct: 2529 STPITSSSVLNSSTPITSSTVVNTS 2553
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSS 315
SS VVN +T + + T P+ + + + TP+ S ST SS
Sbjct: 1058 SSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS-STVLNSS 1101
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSAS 297
SS VVN +T + + T P+ + + + TP+ S++
Sbjct: 1574 SSSVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSST 1612
Score = 25.0 bits (52), Expect = 6.8
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +1
Query: 109 STPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVA--LTPTNSSFTPQPLNPHNSMTAL-- 276
STP T A N S S N S+ + + V TP SS P S T L
Sbjct: 2769 STPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNS 2828
Query: 277 -TPMPSASTQAKSS 315
TP+ S+S S+
Sbjct: 2829 STPITSSSVLNSST 2842
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSAS 297
SS VVN +T + + T P+ + + + TP+ S++
Sbjct: 494 SSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSST 532
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSIKLQNCVATVS 348
SS VVN +T ++ + P+ ++ TP+ S+S S+ + V S
Sbjct: 842 SSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTS 897
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSAS 297
SS VVN +T + + T P+ + + + TP+ S++
Sbjct: 902 SSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSST 940
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSAS 297
SS VVN +T + T P+ + + + TP+ S+S
Sbjct: 1202 SSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSS 1240
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSAS 297
SS VVN +T + + T P+ + + + TP+ S++
Sbjct: 1682 SSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSST 1720
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSAS 297
SS VVN +T + + T P+ + + + TP+ S++
Sbjct: 1742 SSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSST 1780
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSAS 297
SS VVN +T + + T P+ + + + TP+ S++
Sbjct: 1838 SSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSST 1876
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSAS 297
SS VVN +T + + T P+ + + + TP+ S++
Sbjct: 2030 SSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSST 2068
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSAS 297
SS VVN +T + + T P+ + + + TP+ S++
Sbjct: 2294 SSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSST 2332
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSIKLQNCVATVS 348
SS VVN +T ++ + P+ ++ TP+ S+S S+ + V S
Sbjct: 2450 SSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTS 2505
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSAS 297
SS VVN +T + + T P+ + + + TP+ S++
Sbjct: 2606 SSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSST 2644
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSAS 297
SS VVN +T + + T P+ + + + TP+ S++
Sbjct: 2702 SSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSST 2740
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 181 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSAS 297
SS VVN +T + + T P+ + + + TP+ S++
Sbjct: 2930 SSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSST 2968
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/65 (21%), Positives = 29/65 (44%)
Frame = +1
Query: 121 TPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSAST 300
TPI + + ++ SS +VN +T ++ + P+ ++ TP+ S+S
Sbjct: 3166 TPITSSSVLNSSTAIT----SSSIVNSSTPITSSSVLNSSTPITSSTTLNTSTPITSSSV 3221
Query: 301 QAKSS 315
S+
Sbjct: 3222 LNSST 3226
>SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 369
Score = 31.5 bits (68), Expect = 0.079
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +1
Query: 139 NFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSI 318
+F+ EDA S + +NG L +N+ F+ +P P N+++ + S+ + S +
Sbjct: 171 DFATEDALKLALQCSEKALNGRNILIKSNTDFSGRPSKPANTLSKTASIQSSKKEPSSIL 230
Query: 319 KLQN 330
+ N
Sbjct: 231 FVGN 234
>SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 398
Score = 31.1 bits (67), Expect = 0.10
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 373 DIYCRTRYSEYNPARFQGVVMKILDPRATALVFRSGKIVCTGTRNEHDS 519
DI RY N A FQ + + AL F S V +GT + HDS
Sbjct: 193 DIMAAIRYCRTNMAEFQKKHLADIQKTMIALFFCSRNEVLSGTNDSHDS 241
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 29.9 bits (64), Expect = 0.24
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 55 SQENRVEKEHEGSISEMYSTPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNS-S 231
+ N + G S+ S+P+TP+ + SK+ N +S+ NG+ TP S
Sbjct: 504 NDNNDASLQSAGVASDGESSPETPLTKASKSKKAKASKLANDTSKNANGETKSTPKKSKK 563
Query: 232 FTPQPLNPHNSMTA 273
T + NS TA
Sbjct: 564 KTSKAQQEANSTTA 577
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.1 bits (62), Expect = 0.42
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 112 TPKTPIKAQNFS-KEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQP-LNPHNSMTALTPM 285
T +P+ + S + T S+ V V T T+S+ TP P + ++ T+ +P+
Sbjct: 273 TNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPL 332
Query: 286 PSASTQAKSSIKL 324
PS ST +S +
Sbjct: 333 PSTSTSCTTSTSI 345
Score = 27.1 bits (57), Expect = 1.7
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +1
Query: 109 STPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTP--QPLNPHNSMTALTP 282
STP P + + + T+ S ++ PT +S TP + P ++ + TP
Sbjct: 314 STPPPPASTSSTGTSSSPLPSTSTSCTT---STSIPPTGNSTTPVTPTVPPTSTSSTSTP 370
Query: 283 MPSASTQA 306
P AST +
Sbjct: 371 PPPASTSS 378
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 28.7 bits (61), Expect = 0.56
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 115 PKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNSS 231
P+TP+ F AG + +N+SS V +G+ N S
Sbjct: 951 PETPLDTAYFDSRGAGAAESNMSSSVNSGEEVSKDNNVS 989
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 94 ISEMYSTPKTPIKAQNFSKEDAGVSGTNLSSQV 192
+S+MY + + ++FSK D G+S NLS +
Sbjct: 272 VSDMYLSADERNRLEDFSKGDRGLSFVNLSPNI 304
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.5 bits (58), Expect = 1.3
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 157 AGVSGTNLSSQVVNGDV-ALTPTN-SSFTPQPLNPHNSMTALTPMPSASTQAKSSI 318
A V+ T+ SS ++T TN +S P P HNS T P P+ S +++
Sbjct: 42 ANVTTTSFSSASTETSTHSVTSTNITSIVPPPSTSHNSTTTTVP-PTTSMNTTTTV 96
>SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synthase
Ade3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1323
Score = 26.6 bits (56), Expect = 2.2
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +1
Query: 160 GVSGTNLSSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSIKLQNCVA 339
G SGT + VNG ++ F + + HN TA++P P A+T + I+ + V
Sbjct: 272 GNSGTLFAP--VNGIWSMKDEPVEFLGK-VETHNHPTAVSPFPGAATGSGGEIRDEGAVG 328
Query: 340 TVSL 351
SL
Sbjct: 329 QGSL 332
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.2 bits (55), Expect = 3.0
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 262 SMTALTPMPSASTQAKSSIKLQNCVATVSLGCELKL--LDIYCRTRY 396
S L P P ST A S L N A SLG E+K +D++C Y
Sbjct: 203 SFAGLLPSPYLSTYAGSKAFLSNWSA--SLGEEVKKQGIDVWCFNSY 247
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 26.2 bits (55), Expect = 3.0
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 70 VEKEHEGSISEMYSTPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQPL 249
V K + +Y +P++ + + + D N NG + S FT Q
Sbjct: 322 VSKPPSSATGPLYHSPQSSLTNSSVASADVQERTHN-----TNGASPIQDQISEFTDQHQ 376
Query: 250 NPHNSMTALTP--MPSASTQAKSSIK 321
NP N+ A T + +A TQ +S K
Sbjct: 377 NPSNNDAASTQSILKTAPTQLSASAK 402
>SPAC22E12.14c |sck2||serine/threonine protein kinase
Sck2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 646
Score = 25.8 bits (54), Expect = 3.9
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 136 QNFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSS 315
++FS D + LSS V NG T ++S + HNS + + + S +K +
Sbjct: 568 RDFSSTDEMSTSAPLSSTVQNGFKGFTYIDASAMDEAFGYHNSNDSASSISSQDDYSKDN 627
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 25.4 bits (53), Expect = 5.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 122 VFGVEYISLIEPSCSFSTLF 63
VF +Y++L+ CSF+ F
Sbjct: 9 VFSAQYVALVHTICSFAAFF 28
>SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 972
Score = 25.0 bits (52), Expect = 6.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 261 FYDCFNTYAKCIHSSKKQYQATKLC 335
F DC N ++KC K++ K C
Sbjct: 288 FNDCLNMFSKCFKFLKQKLSDRKSC 312
>SPAC14C4.06c |||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 25.0 bits (52), Expect = 6.8
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = +1
Query: 70 VEKEHEGSISEMYSTPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVA----LTPTNSSFT 237
+EKE + +S P+T I+ Q S + ++ ++ G V LT F
Sbjct: 98 IEKESTDKSQQSFSVPETSIQPQ--SSQTPNITSLREEKELPTGRVGQKLKLTSQKQRFN 155
Query: 238 PQPLNPHNSMTALTPMPSASTQAK 309
P + + S + + A TQ +
Sbjct: 156 PMAASFNYSKSVMPAAKRALTQTQ 179
>SPBP18G5.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 430
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +1
Query: 319 KLQNCVATVSLGCELKLLDIYCRTRYSEYNPARFQGVVMKI 441
K +NC A GC L +L + SE FQ +K+
Sbjct: 51 KAENCSAVACRGCNLCILAVQGNIEISEEPQKLFQEENVKV 91
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 244 PLNPHNSMTALTPMPSASTQAKSSIK 321
P HN + A PS STQ KS+++
Sbjct: 31 PNRHHNLVDAFMQSPSYSTQPKSAVE 56
>SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1315
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 429 CHENIRSSSYRLSIQIWENSLYWDKK 506
CH+ + SS R+ +W+N + KK
Sbjct: 628 CHDGLASSISRIIRNVWKNHVIIAKK 653
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,928,520
Number of Sequences: 5004
Number of extensions: 36311
Number of successful extensions: 219
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -