Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS317G04f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   5.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   5.8  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   5.8  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   5.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.7  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 327 KLCCHSQFRM*TKIIRYLLQNK 392
           K C   Q  +  K+I++L++NK
Sbjct: 77  KKCTDKQREVIKKVIKFLVENK 98


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 280 PMPSASTQAKSSIKLQNCVATVSLGC 357
           P+P  + + K+ +KL +   T+  GC
Sbjct: 413 PVPLIAREIKTDLKLASGDYTIPAGC 438


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 327 KLCCHSQFRM*TKIIRYLLQNK 392
           K C   Q  +  K+I++L++NK
Sbjct: 77  KKCTDKQREVIKKVIKFLVENK 98


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 327 KLCCHSQFRM*TKIIRYLLQNK 392
           K C   Q  +  K+I++L++NK
Sbjct: 77  KKCTDKQREVIKKVIKFLVENK 98


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 259 NSMTALTPMPSASTQAKSSIKLQNCVATVSLG 354
           N    L P P+A+ +         CVA+ S+G
Sbjct: 84  NGTLVLLPFPAAAFRQDVHSAAYRCVASNSVG 115


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 259 NSMTALTPMPSASTQAKSSIKLQNCVATVSLG 354
           N    L P P+A+ +         CVA+ S+G
Sbjct: 84  NGTLVLLPFPAAAFRQDVHSAAYRCVASNSVG 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,490
Number of Sequences: 438
Number of extensions: 2213
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)