Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS317G02f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0483 - 8804021-8804485 46 2e-05
03_02_0484 + 8805053-8805538 45 3e-05
03_02_0478 + 8775892-8776377 45 4e-05
03_02_0485 - 8808139-8808618 44 7e-05
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 43 1e-04
01_01_0229 - 1943473-1943922 43 1e-04
01_01_0231 + 1951047-1951499 42 2e-04
01_01_0227 + 1933247-1933699 40 0.002
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 39 0.003
02_02_0077 - 6586638-6587165 38 0.006
02_01_0222 + 1450233-1450766 35 0.034
06_01_1017 - 7951985-7952425 33 0.11
03_05_0543 - 25404630-25405408,25405461-25405605 32 0.32
11_02_0041 - 7669692-7670312 31 0.42
02_01_0760 - 5639315-5639685,5640072-5640360 30 0.98
03_02_0320 + 7437528-7437623,7437725-7437772,7438885-7438994,743... 29 1.7
12_02_1174 - 26696869-26698191 29 3.0
12_01_0946 + 9376037-9376318 29 3.0
03_06_0123 - 31821915-31822094,31822187-31822324,31822413-318228... 28 4.0
12_02_0634 + 21416205-21416954 27 6.9
10_07_0141 + 13347648-13348331 27 6.9
01_07_0096 - 41059668-41059886,41059978-41060154,41060575-410607... 27 6.9
03_03_0217 + 15500943-15502196 27 9.1
01_01_0893 + 7043130-7043182,7043309-7043335,7043461-7043560,704... 27 9.1
>03_02_0483 - 8804021-8804485
Length = 154
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 407
DV EE+ V+ DG V+ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 408 TVESRLSSDGVLTVIAPRTPAATKNERAXPIT 503
+++ + +GVLTV P+ + ++ IT
Sbjct: 123 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQIT 153
>03_02_0484 + 8805053-8805538
Length = 161
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 407
DV EE+ V+ DG V+ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 408 TVESRLSSDGVLTVIAPRTPAATKNERAXPIT 503
+++ + +GVLTV P+ + ++ +T
Sbjct: 130 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQVT 160
>03_02_0478 + 8775892-8776377
Length = 161
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 407
DV EE+ V+ DG ++ + G+ EE+ D+ + R +F RR+ LP+N P+
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 408 TVESRLSSDGVLTVIAPRTPAATKNERAXPIT 503
+++ + +GVLTV P+ A + ++ I+
Sbjct: 130 QIKASM-ENGVLTVTVPKEEAKKPDVKSIQIS 160
>03_02_0485 - 8808139-8808618
Length = 159
Score = 44.0 bits (99), Expect = 7e-05
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Frame = +3
Query: 252 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 407
DV EE+ V+ DG ++ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 408 TVESRLSSDGVLTVIAPR 461
+++ + +GVLTV P+
Sbjct: 128 QIKASM-ENGVLTVTVPK 144
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Frame = +3
Query: 186 AMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHG 350
A AN + T F+ D+ EE+ V+ +G V+V + E++ D+
Sbjct: 39 AFANARIDWKETPESHVFKA--DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 96
Query: 351 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAXPIT 503
+ R QF RR+ LPEN D V++ L +GVLTV P+ +A I+
Sbjct: 97 RVERSSGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVPKAEVKKPEVKAIEIS 149
>01_01_0229 - 1943473-1943922
Length = 149
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Frame = +3
Query: 186 AMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHG 350
A AN V T F+ D+ EE+ V+ +G V+V + E++ D+
Sbjct: 38 AFANARVDWKETPESHVFKA--DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 95
Query: 351 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAXPIT 503
+ R QF RR+ LPEN D V++ + +GVLTV P+ +A I+
Sbjct: 96 RVERSSGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVPKAEVKKPEVKAIEIS 148
>01_01_0231 + 1951047-1951499
Length = 150
Score = 42.3 bits (95), Expect = 2e-04
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Frame = +3
Query: 186 AMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHG 350
A AN + T F+ D+ EE+ V+ +G V+V + E++ D+
Sbjct: 39 AFANARIDWKETPESHVFKA--DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 96
Query: 351 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAXPIT 503
+ R QF RR+ LPEN D V++ + +GVLTV P+ +A I+
Sbjct: 97 RVERSSGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVPKAEVKKPEVKAIEIS 149
>01_01_0227 + 1933247-1933699
Length = 150
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +3
Query: 312 VEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERA 491
V+GK++ER S +F RR+ LP D V + + +GVLTV P+ +A
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKEETKKPQLKA 145
Query: 492 XPIT 503
PI+
Sbjct: 146 IPIS 149
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Frame = +3
Query: 171 PWKQMAMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDE-- 344
P + +A + + + + ++ D+ S EE+ V D +++ G+H++ + E
Sbjct: 122 PRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGA 181
Query: 345 ----HGYISRQ----FTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATK 479
G+ + + R ALP+ C+ V + L +GVL V P+T K
Sbjct: 182 EGSGDGWWKERSVSSYDMRLALPDECDKSKVRAEL-KNGVLLVTVPKTEVERK 233
>02_02_0077 - 6586638-6587165
Length = 175
Score = 37.5 bits (83), Expect = 0.006
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 14/147 (9%)
Frame = +3
Query: 114 PDDLLTAVITPTMSRDYYRPWKQMAMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKT 293
PD+L + PT R Y R + MA DV S + +D+ +P ++ V+
Sbjct: 25 PDELERQLNPPT--RAYVRDRRAMANTPMDVKELRASGA--LVLAVDMPGVAPADVRVEV 80
Query: 294 ADGYVIVEGKHEERQ----DEHG----YISRQ-----FTRRYALPENCNPDTVESRLSSD 434
DG V+ R D+ G Y+ + F RR+ LPE+ + D V + D
Sbjct: 81 EDGNVLAISGERRRPAGDGDDGGEGVKYLRMERRMGKFMRRFPLPESADLDGVRAEY-KD 139
Query: 435 GVLTV-IAPRTPAATKNERAXPITQTG 512
GVLTV + + P K R + G
Sbjct: 140 GVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>02_01_0222 + 1450233-1450766
Length = 177
Score = 35.1 bits (77), Expect = 0.034
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Frame = +3
Query: 273 EEISVKTADGYVI-VEGKHEERQDEHGY-------ISRQFTRRYALPENCNPDTVESRLS 428
EE+ V+ + V+ + G+ +E G S +F R LP N N D V + L
Sbjct: 93 EEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALD 152
Query: 429 SDGVLTVIAPRTPAATKNERAXPIT 503
+ GVLT+ P+ + R PIT
Sbjct: 153 N-GVLTITIPKDNDRKPHARIIPIT 176
>06_01_1017 - 7951985-7952425
Length = 146
Score = 33.5 bits (73), Expect = 0.11
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +3
Query: 279 ISVKTADGYVIVEGKHEERQDEHGYISR----QFTRRYALPENCNPDTVESRLSSDGVLT 446
++V+ A + E + E +D +++ +F R ALP + + + + + GVLT
Sbjct: 65 LTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDN-GVLT 123
Query: 447 VIAPRTPAATKNERAXPI 500
V+ P+ PA + R PI
Sbjct: 124 VVVPKEPAPAR-PRTRPI 140
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 31.9 bits (69), Expect = 0.32
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +3
Query: 231 DKFQVNLDVQHFSPEEISVKTAD-GYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPD 407
+ ++LD F EEI V + G++ G ER SR F + + LP +CN D
Sbjct: 39 NSIHLSLDQLGFKREEIRVLVDNHGHLRTRG---ERPVAGNRWSR-FQKDFQLPADCNVD 94
Query: 408 TVESRLSSDGVLTVIAPRTPA-ATKNERAXPIT 503
+ ++ ++ + + +TP+ T + P+T
Sbjct: 95 GIRAKFENEALTITLPKKTPSPLTPSPTPSPVT 127
>11_02_0041 - 7669692-7670312
Length = 206
Score = 31.5 bits (68), Expect = 0.42
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 363 QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTP 467
+F RR+ +P + V +RL DGVLTV P+ P
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVPKVP 174
>02_01_0760 - 5639315-5639685,5640072-5640360
Length = 219
Score = 30.3 bits (65), Expect = 0.98
Identities = 21/98 (21%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Frame = +3
Query: 198 RDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGK-----HEER-QDEHG--Y 353
R + + +++++++ +V +++ V DG + + G+ E+R +D G +
Sbjct: 111 RPLTGKVREDEERYRLRFEVPGLGKDDVRVYVDDGVLAIHGEKRDVVEEDRGRDGDGECW 170
Query: 354 ISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTP 467
+ + LPE+ + + + + DGVL V PR+P
Sbjct: 171 AAATYHAGLLLPEDAVAEGITAEVR-DGVLHVTVPRSP 207
>03_02_0320 +
7437528-7437623,7437725-7437772,7438885-7438994,
7439651-7439735,7439839-7440115,7440296-7440454,
7440563-7440666,7440930-7441168,7441265-7441583,
7441665-7442069,7442157-7442294,7442376-7442555
Length = 719
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 165 YRPWKQMAMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADG 302
Y+ W++ AMA + + ++ VN D + SP + T DG
Sbjct: 214 YKKWERAAMAGVSLVADAAEELERNTVNADARMLSPSSSNACTVDG 259
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 3.0
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +3
Query: 243 VNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESR 422
V + + F E++ V+ D + ++ E G +F + LP+NC+ D V +R
Sbjct: 26 VEIALPGFRKEQVRVQV-DNHGMLRATGERPPAARGGRWVRFKKDLRLPDNCDADAVRAR 84
Query: 423 LSSDGVLTVIAPRTPAA 473
D L + P AA
Sbjct: 85 F-DDHKLIITLPLVAAA 100
>12_01_0946 + 9376037-9376318
Length = 93
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 135 VITPTMSRDYYRPWKQMAMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGY 305
++T T S RPWK N D T T + + + +++ +P +I + GY
Sbjct: 2 IVTTTSSTTTTRPWKTPTRENHDNQHTPTRSHN---IQANIRQDTPPDIDFRDRHGY 55
>03_06_0123 -
31821915-31822094,31822187-31822324,31822413-31822817,
31822897-31823212,31823305-31823543,31823800-31823903,
31823987-31824145,31824326-31824510,31825318-31825427,
31826900-31826947,31827047-31827241,31827354-31827422,
31829521-31829620,31829879-31829940
Length = 769
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 165 YRPWKQMAMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTAD 299
Y+ W++ AMA + + ++ VN+D + SP +V T D
Sbjct: 265 YKKWERDAMAGVSLVADAAEELERNTVNVDARTLSPSSNNVCTVD 309
>12_02_0634 + 21416205-21416954
Length = 249
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 489 LARSSWQPESWERSRSARRQRTTEIRQCQG 400
LAR QPE R R R T R+C G
Sbjct: 62 LARLPGQPEEMSTRRKVRPARATVFRRCSG 91
>10_07_0141 + 13347648-13348331
Length = 227
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 348 GYISRQFTRRYALPENCNPDTVESRLSSD-GVLTVIAPRTPAATKNERA 491
G+I+ +F RRY + ++ P+ E+ L+ D +L ++ A N RA
Sbjct: 31 GFITNKFGRRYGVGDHGTPE--EAALAHDRAILAILGAHASPAALNFRA 77
>01_07_0096 -
41059668-41059886,41059978-41060154,41060575-41060778,
41060874-41061089,41061698-41061961,41062413-41062654,
41062728-41062851,41062852-41062991,41063349-41063397,
41063735-41063891,41063982-41064130,41064267-41064299,
41064497-41064575,41064961-41065040,41065438-41065560
Length = 751
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +3
Query: 159 DYYRPWKQMAMAN---RDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHE 329
D+Y PW + A +DV ++S K ++V+ F +EI+ DG+V ++ E
Sbjct: 43 DWY-PWGEEAFEKARRKDVPIFLSSMKCHV---MEVESFENDEIAKILNDGFVSIKVDRE 98
Query: 330 ERQD 341
ER D
Sbjct: 99 ERPD 102
>03_03_0217 + 15500943-15502196
Length = 417
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 245 DLEFVLIRGDGGTDVSIGHRHLL 177
D+E V++ GD GTDV + H L
Sbjct: 354 DVEVVVVHGDAGTDVEKYYAHSL 376
>01_01_0893 +
7043130-7043182,7043309-7043335,7043461-7043560,
7045110-7045256,7045342-7045422,7045509-7045654,
7046030-7046099
Length = 207
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 46 CCHSSWDTNLTAFAIRTSGWRLLLTIS*RPSSRQRCPEITTG 171
CC +D N+T R + WR I PS + P + G
Sbjct: 83 CCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLG 124
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,301,374
Number of Sequences: 37544
Number of extensions: 266930
Number of successful extensions: 998
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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