Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS317F10f
(498 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0665 - 31003333-31003680,31003773-31003854,31004068-310041... 85 3e-17
05_06_0123 + 25817172-25817470,25818983-25819133,25819217-258193... 83 9e-17
05_06_0187 - 26212133-26212477,26212564-26212645,26213066-262131... 77 8e-15
01_06_0546 + 30124693-30124970,30125711-30125861,30125955-301261... 75 3e-14
01_01_0638 - 4819365-4819685,4819702-4819882,4820018-4820073,482... 73 1e-13
07_01_0702 + 5288588-5288889,5289257-5289407,5289543-5289725,529... 66 1e-11
07_03_0211 + 15239636-15241132 64 6e-11
01_07_0132 - 41298184-41298558,41298648-41298729,41298850-412989... 62 2e-10
05_01_0589 - 5281105-5281434,5281532-5281613,5281833-5281963,528... 56 2e-08
05_04_0096 - 17931061-17931435,17931539-17931620,17932319-179324... 51 4e-07
01_01_0384 - 2970369-2970726,2970812-2970882,2971428-2971509,297... 30 0.90
05_01_0453 - 3592555-3592897,3592997-3593067,3593372-3593465,359... 29 1.6
08_02_0644 - 19658270-19658626,19659142-19659218,19659256-196594... 29 2.7
08_02_1360 + 26391141-26391287,26392256-26392627,26393372-26393860 28 3.6
11_06_0701 + 26407055-26407597,26407794-26409644 27 8.4
>01_06_0665 -
31003333-31003680,31003773-31003854,31004068-31004198,
31004272-31004370,31004511-31004666,31004877-31004951,
31005554-31005736,31005833-31005983,31006732-31007027
Length = 506
Score = 85.0 bits (201), Expect = 3e-17
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Frame = +1
Query: 181 DLKKGLSRADHDKATVKCWITYIQDLPNGKERGKFLALDLGGTNFRVLIINLGENHFDMQ 360
++++GL RAD A +K I+Y+ +LP G E G F ALDLGGTNFRV+ + LG +
Sbjct: 73 EMERGL-RAD-PHAPLKMLISYVDNLPTGDEHGLFYALDLGGTNFRVIRVQLGGREKRVV 130
Query: 361 SKIY---AIPKHIMTGTGIALFDHIAEXLANFMKEHGVYEEDWH 483
S+ Y AIP H+M GT + LFD IA L +F+K G ED+H
Sbjct: 131 SQQYEEVAIPPHLMVGTSMELFDFIAAELESFVKTEG---EDFH 171
>05_06_0123 +
25817172-25817470,25818983-25819133,25819217-25819399,
25819740-25819814,25819985-25820140,25820275-25820373,
25820457-25820587,25821077-25821158,25821251-25821598
Length = 507
Score = 83.4 bits (197), Expect = 9e-17
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Frame = +1
Query: 181 DLKKGLSRADHDKATVKCWITYIQDLPNGKERGKFLALDLGGTNFRVLIINLG---ENHF 351
++++GL H A VK ITY+ +LP G E+G F ALDLGGTNFRVL + LG +
Sbjct: 74 EMERGLRGDSH--AMVKMLITYVDNLPTGNEQGLFYALDLGGTNFRVLRVQLGGKEKRVV 131
Query: 352 DMQSKIYAIPKHIMTGTGIALFDHIAEXLANFMKEHGVYEEDWH 483
Q + +IP H+M GT + LFD IA L+ F+ G +D+H
Sbjct: 132 QQQYEEVSIPPHLMVGTSMELFDFIASALSKFVDTEG---DDFH 172
>05_06_0187 -
26212133-26212477,26212564-26212645,26213066-26213196,
26213267-26213365,26213627-26213782,26213891-26213965,
26214156-26214338,26214431-26214581,26215456-26215718
Length = 494
Score = 77.0 bits (181), Expect = 8e-15
Identities = 49/131 (37%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Frame = +1
Query: 100 LQRIREECEVLKMTDKQIKEIMCRLHNDLKKGLSRADHDKATVKCWITYIQDLPNGKERG 279
L+ + E C +Q+ + M ++ GL+ K +K I+Y+ LP+G+E+G
Sbjct: 38 LRELEERCAAPPGRLRQVADAMAV---EMHAGLASEGGSK--LKMIISYVDALPSGEEKG 92
Query: 280 KFLALDLGGTNFRVLIINLGENH---FDMQSKIYAIPKHIMTGTGIALFDHIAEXLANFM 450
F ALDLGGTNFRVL + LG + +IP H+MTG LFD IA LA F+
Sbjct: 93 VFYALDLGGTNFRVLRVQLGGKEGRVIKQEHDEISIPPHLMTGGSNELFDFIASSLAKFV 152
Query: 451 KEHGVYEEDWH 483
G ED+H
Sbjct: 153 ASEG---EDFH 160
>01_06_0546 +
30124693-30124970,30125711-30125861,30125955-30126137,
30126333-30126407,30126535-30126690,30126909-30127007,
30127075-30127205,30127690-30127771,30127846-30128199
Length = 502
Score = 74.9 bits (176), Expect = 3e-14
Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
Frame = +1
Query: 100 LQRIREECEVLKMTDKQIKEIMCRLHNDLKKGLSRADHDKATVKCWITYIQDLPNGKERG 279
L+ ++E C +Q+ + M +++ GL A + ++ +TY+ LP+G E+G
Sbjct: 43 LRDLQERCAAPVELLRQVADAMAA---EMRAGL--AAEGGSDLQMLVTYVDSLPSGGEKG 97
Query: 280 KFLALDLGGTNFRVLIINLGENH---FDMQSKIYAIPKHIMTGTGIALFDHIAEXLANFM 450
F ALDLGGTNFRVL + LG S+ +IP+H+M+ + LFD +A LA F+
Sbjct: 98 MFYALDLGGTNFRVLRVQLGGKERRIIKQDSEGISIPQHLMSSSSHELFDFVAVALAKFV 157
Query: 451 KEHGVYEEDWH 483
G ED H
Sbjct: 158 ASEG---EDCH 165
>01_01_0638 -
4819365-4819685,4819702-4819882,4820018-4820073,
4820107-4820148,4820484-4820639,4820681-4820809,
4821072-4821254,4821374-4821524,4821670-4821848
Length = 465
Score = 73.3 bits (172), Expect = 1e-13
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Frame = +1
Query: 151 IKEIMCRLHNDLKKGLSRADHDKATVKCWITYIQDLPNGKERGKFLALDLGGTNFRVLII 330
++++ + ++ GL + + VK ++Y+ LP G+E G F LDLGGTNFRVL +
Sbjct: 24 LRDVAAAMAGEMGAGLEKEGGSR--VKMLLSYVDKLPTGREDGLFYGLDLGGTNFRVLKV 81
Query: 331 NLG--ENH-FDMQSKIYAIPKHIMTGTGIALFDHIAEXLANFMKE 456
+LG + H + +S+ +IP H+M+GT LF IA L F+ E
Sbjct: 82 HLGGSKKHVVNSESREVSIPPHLMSGTSSELFGFIAGELGKFVAE 126
>07_01_0702 +
5288588-5288889,5289257-5289407,5289543-5289725,
5290063-5290137,5290248-5290403,5290502-5290597,
5290855-5290985,5291057-5291138,5291237-5291586,
5293029-5293234,5293254-5293570
Length = 682
Score = 66.1 bits (154), Expect = 1e-11
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Frame = +1
Query: 151 IKEIMCRLHNDLKKGLSRADHDKATVKCWITYIQDLPNGKERGKFLALDLGGTNFRVLII 330
++ + + + ++ GL AD +K +++ LP G E G F ALDLGGTNFRVL +
Sbjct: 65 LRRVADAMASGMRAGL--ADDGAGELKMIPSHVYSLPTGNETGLFYALDLGGTNFRVLRV 122
Query: 331 NLG---ENHFDMQSKIYAIPKHIMTGTGIALFDHIAEXLANFMKEHG 462
LG + D + + +IP+ IM G LFD IA L+ F+ G
Sbjct: 123 QLGGKDKRIIDTEFEQVSIPREIMHGITEDLFDFIASGLSRFVATEG 169
>07_03_0211 + 15239636-15241132
Length = 498
Score = 64.1 bits (149), Expect = 6e-11
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Frame = +1
Query: 76 KMGIVVDNLQRIREECEVLKMTDKQIKEIMCRLHNDLKKGLSRADHDKATVKCWITYIQD 255
KM + +RE C ++ E+ + +++ GL+ + + +K ++Y+
Sbjct: 37 KMAAAQRVVAELREACAT---PAARLAEVAAAMAGEMEAGLA-VEGGSSEMKMIVSYVDS 92
Query: 256 LPNGKERGKFLALDLGGTNFRVLIINL-GENHFDMQSKIYAIPKHIMTGTGI---ALFDH 423
LP G E G + ALDLGGTNFRVL + L G + ++ IP +M+G G LF
Sbjct: 93 LPTGGEEGSYYALDLGGTNFRVLRVRLAGGGVAERVAREVPIPPGLMSGGGATSECLFGF 152
Query: 424 IAEXLANFMKE 456
IA LA F+ E
Sbjct: 153 IASALAEFVGE 163
>01_07_0132 -
41298184-41298558,41298648-41298729,41298850-41298977,
41299059-41299157,41299279-41299434,41300709-41300783,
41301962-41302137,41303210-41303252,41303336-41303503,
41303584-41303731,41306316-41306587
Length = 573
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Frame = +1
Query: 109 IREECEVLKMTDKQIKEIMCRLHNDLKKGLSRADHDKATVKCWITYIQDLPNGKERGKFL 288
+RE E ++++++ + ++ GL+ K +K +T++ LP+G E G +
Sbjct: 41 LREFEEGCATPPARLRQVVDAMVVEMHAGLASDGGSK--LKMLLTFVDALPSGSEEGVYY 98
Query: 289 ALDLGGTNFRVLIINLGENHFDMQSKI--YAIPKHIMTGTGIALFDHIAEXLANFMK 453
++DLGGTNFRVL + +G + K+ IP+ + GT LF+ +A L NF++
Sbjct: 99 SIDLGGTNFRVLRVQVGAGSVIVNQKVEQQPIPEELTKGTTEGLFNFVALALKNFLE 155
>05_01_0589 -
5281105-5281434,5281532-5281613,5281833-5281963,
5282029-5282169,5282274-5282429,5282522-5282596,
5282777-5282956,5283097-5283247,5283526-5283612,
5284239-5284349,5284447-5284634
Length = 543
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +1
Query: 271 ERGKFLALDLGGTNFRVLIINLG---ENHFDMQSKIYAIPKHIMTGTGIALFDHIAEXLA 441
E G F ALDLGGTNFRVL + L + +S+ +IP H+M+G LF IA LA
Sbjct: 131 EEGLFYALDLGGTNFRVLRVQLAGKEKRVVKRESREVSIPPHLMSGNSSELFGFIASALA 190
Query: 442 NFMKEHG 462
F+ + G
Sbjct: 191 KFVADEG 197
>05_04_0096 -
17931061-17931435,17931539-17931620,17932319-17932446,
17932523-17932621,17932739-17932894,17934120-17934194,
17934582-17934749,17934825-17934993,17936640-17936923
Length = 511
Score = 51.2 bits (117), Expect = 4e-07
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Frame = +1
Query: 226 VKCWITYIQDLPNGK-------ERGKFLALDLGGTNFRVLIINLGENHFDMQSKI--YAI 378
V+ +T + LP+G E G A+DLGGT+FRVL + LG + K+ I
Sbjct: 82 VRMLLTCVDALPDGSSHDMTRSEEGISYAIDLGGTSFRVLKVELGAGSTIINRKVEHQPI 141
Query: 379 PKHIMTGTGIALFDHIAEXLANFMKEHG 462
P+++ GT LF+ IA L NF++ G
Sbjct: 142 PENLTKGTSDDLFNFIASALKNFIEREG 169
>01_01_0384 -
2970369-2970726,2970812-2970882,2971428-2971509,
2971757-2971818,2972308-2972401,2972502-2972569,
2972681-2972747,2972830-2972960,2973093-2973200,
2973577-2973642,2973706-2973774,2973990-2974115,
2974167-2974284,2974741-2974847,2975889-2976009,
2976162-2976235,2976955-2977051,2977564-2977679,
2978218-2978313,2978426-2978635,2979101-2979253
Length = 797
Score = 30.3 bits (65), Expect = 0.90
Identities = 13/59 (22%), Positives = 29/59 (49%)
Frame = +1
Query: 79 MGIVVDNLQRIREECEVLKMTDKQIKEIMCRLHNDLKKGLSRADHDKATVKCWITYIQD 255
+ + L++ REE + + Q+ + N+L K ++ + + VK WI +++D
Sbjct: 456 LNAAIGRLKQTREERDQFDEANNQMIFSLKAKDNELSKSITSCNVEAGVVKTWINFLED 514
>05_01_0453 -
3592555-3592897,3592997-3593067,3593372-3593465,
3593547-3593614,3593694-3593760,3593924-3594054,
3594145-3594252,3594671-3594757,3594991-3595056,
3595564-3595630,3596116-3596192,3596358-3596417,
3597363-3597480,3597833-3597906,3598216-3598312,
3599328-3599380,3599535-3599630,3599768-3599965,
3600556-3600722,3600813-3600882,3601428-3601448,
3602851-3602982
Length = 754
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 100 LQRIREECEVLKMTDKQIKEIMCRLHNDLKKGLSRADHDKATVKCWITYIQD 255
L++ REE + + QI + +DL K ++ + + VK WI +++D
Sbjct: 473 LKKTREERDQFDEANNQIIFKLKTKEDDLSKSIASCNVEANVVKTWINFLED 524
>08_02_0644 -
19658270-19658626,19659142-19659218,19659256-19659430,
19659543-19659596,19659691-19659858,19660756-19660953,
19661546-19661632,19661739-19661827,19662499-19662955
Length = 553
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = -2
Query: 368 ILDCISKWFSPKF---IIKTLKF-VPPKSNAKNLPLSFPLGKSC 249
+ DC+ + P F ++K K +PP+S +K+L F L +SC
Sbjct: 188 VFDCVDIYRQPAFDHPLLKNHKLQIPPRSYSKSLITHFGLQESC 231
>08_02_1360 + 26391141-26391287,26392256-26392627,26393372-26393860
Length = 335
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 163 MCRLHNDLKKGLSRADHDKATV-KCWITYIQDLPNGKERGKF 285
+C LH + GL+ HD A V + W Y P + RG F
Sbjct: 284 VCTLHANCCTGLANKVHDLAAVLRDWRNYTAAPPAARRRGGF 325
>11_06_0701 + 26407055-26407597,26407794-26409644
Length = 797
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +1
Query: 82 GIVVDNLQRIREECEVLKMTDKQIKEIMCRLHNDLKKGLSRADHDKATVKCWITYIQD 255
GI+ + I E LK K++K+I C L + ++G+ + + V W+++++D
Sbjct: 18 GIITEEAILILGVEEELKKLQKRMKQIQCFLSDAERRGM-----EDSAVHNWVSWLKD 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,305,889
Number of Sequences: 37544
Number of extensions: 243234
Number of successful extensions: 546
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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