Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS317F09f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118795-1|AAM50655.1|   85|Drosophila melanogaster GH16758p pro...    71   7e-13
AE014134-2805|AAF53585.1|   85|Drosophila melanogaster CG6115-PA...    71   7e-13
BT024338-1|ABC86400.1|  292|Drosophila melanogaster IP09923p pro...    28   6.7  
AE013599-3871|AAF47204.1|  280|Drosophila melanogaster CG15874-P...    28   6.7  

>AY118795-1|AAM50655.1|   85|Drosophila melanogaster GH16758p
           protein.
          Length = 85

 Score = 71.3 bits (167), Expect = 7e-13
 Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
 Frame = +2

Query: 125 LLYLXRDWP--QGFDLFRKRLHKVFSKNSEETDPQKIQIMVKHGEFVVKEIEALYKLKKY 298
           L YL R++P   G   FRK++H  F  + +E DP+KI  ++  G ++ KE+EALY LKKY
Sbjct: 15  LQYLGREYPGLNGPQKFRKQIHDAFMNHKDEQDPKKIVALLAQGRYLAKEVEALYSLKKY 74

Query: 299 RAMKRRY-YDD 328
           R++K+RY Y+D
Sbjct: 75  RSVKQRYSYND 85


>AE014134-2805|AAF53585.1|   85|Drosophila melanogaster CG6115-PA
           protein.
          Length = 85

 Score = 71.3 bits (167), Expect = 7e-13
 Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
 Frame = +2

Query: 125 LLYLXRDWP--QGFDLFRKRLHKVFSKNSEETDPQKIQIMVKHGEFVVKEIEALYKLKKY 298
           L YL R++P   G   FRK++H  F  + +E DP+KI  ++  G ++ KE+EALY LKKY
Sbjct: 15  LQYLGREYPGLNGPQKFRKQIHDAFMNHKDEQDPKKIVALLAQGRYLAKEVEALYSLKKY 74

Query: 299 RAMKRRY-YDD 328
           R++K+RY Y+D
Sbjct: 75  RSVKQRYSYND 85


>BT024338-1|ABC86400.1|  292|Drosophila melanogaster IP09923p
           protein.
          Length = 292

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 146 WPQGFDLFRKRLHKVFSKNSEETDPQKIQIMVKHGEF 256
           W   +DL + +L KV   N EE+   +  I+V+HGE+
Sbjct: 67  WRHHWDLDKPQLQKV--ANGEESSALRHIILVRHGEY 101


>AE013599-3871|AAF47204.1|  280|Drosophila melanogaster CG15874-PA
           protein.
          Length = 280

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 146 WPQGFDLFRKRLHKVFSKNSEETDPQKIQIMVKHGEF 256
           W   +DL + +L KV   N EE+   +  I+V+HGE+
Sbjct: 55  WRHHWDLDKPQLQKV--ANGEESSALRHIILVRHGEY 89


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,129,318
Number of Sequences: 53049
Number of extensions: 262286
Number of successful extensions: 542
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)