Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS317F08f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical pr... 35 0.031
Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical pr... 35 0.031
U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z75550-6|CAA99930.1| 591|Caenorhabditis elegans Hypothetical pr... 29 1.5
U53139-13|AAK18939.1| 334|Caenorhabditis elegans Hypothetical p... 29 2.0
AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical ... 29 2.0
AB275892-1|BAF34315.1| 334|Caenorhabditis elegans D-aspartate o... 29 2.0
AF067214-6|AAC17005.2| 457|Caenorhabditis elegans Hypothetical ... 29 2.7
Z73906-12|CAE17767.1| 170|Caenorhabditis elegans Hypothetical p... 28 3.5
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z36238-1|CAA85275.2| 400|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical ... 27 6.2
AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5 prot... 27 6.2
AC092690-3|AAK73857.1| 1145|Caenorhabditis elegans Hypothetical ... 27 6.2
>Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical
protein F40F9.6b protein.
Length = 910
Score = 35.1 bits (77), Expect = 0.031
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 342 LQSHTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPL--DGEDEAEVVEGRKK 500
L T+RV++ +E + YVP L LP EL+ +G+ EA+++ G KK
Sbjct: 81 LADSTVRVQI-DEPESAIRKRYVPNPALVSLPEELEFSSVENGDQEAKIIGGNKK 134
>Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical
protein F40F9.6a protein.
Length = 924
Score = 35.1 bits (77), Expect = 0.031
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 342 LQSHTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPL--DGEDEAEVVEGRKK 500
L T+RV++ +E + YVP L LP EL+ +G+ EA+++ G KK
Sbjct: 95 LADSTVRVQI-DEPESAIRKRYVPNPALVSLPEELEFSSVENGDQEAKIIGGNKK 148
>U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical
protein K02F3.6 protein.
Length = 404
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +3
Query: 93 ASATYPASKLVKNIYNECLSQYSVECVKPRTLQWISSVANDDEIKITEDLSIVKTGTVED 272
AS YP + +NI+N Q + P + W ++ D + L+ +K GT++
Sbjct: 318 ASFKYPIN-YYRNIFNAKKQQADLVLEMPTLIIWGTADGALDIEAAVDSLNTLKQGTMKK 376
Query: 273 DESADPRLAKDPAYEMFDKVDKFLQSH 353
E A + +D + + + KFL +
Sbjct: 377 IEGASHWVQQDEPEMVNEHIKKFLNKY 403
>Z75550-6|CAA99930.1| 591|Caenorhabditis elegans Hypothetical
protein T22C1.8 protein.
Length = 591
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 258 GTVEDDESADPRLAKDPAYEMFDKVDK 338
G +DD+ A RLAK P+ E D+ DK
Sbjct: 9 GNSQDDQQASRRLAKKPSDEKVDEKDK 35
>U53139-13|AAK18939.1| 334|Caenorhabditis elegans Hypothetical
protein F18E3.7a protein.
Length = 334
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -1
Query: 359 KSMTLEKLVHFVEHFVGRILGQSRVGRFIILNCSGLHDRKIFSD 228
K++ LE+ + F + V + + G +I+NC+GL+ K+ D
Sbjct: 151 KNLLLEQKIEFKQQEVTSLDAVADAGYDVIVNCAGLYGGKLAGD 194
>AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical
protein C45H4.13 protein.
Length = 349
Score = 29.1 bits (62), Expect = 2.0
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = -1
Query: 71 HYYSGHFHCCSLFPSC 24
+YYSG+++CC+ + SC
Sbjct: 318 NYYSGNYYCCNSYRSC 333
>AB275892-1|BAF34315.1| 334|Caenorhabditis elegans D-aspartate
oxidase protein.
Length = 334
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -1
Query: 359 KSMTLEKLVHFVEHFVGRILGQSRVGRFIILNCSGLHDRKIFSD 228
K++ LE+ + F + V + + G +I+NC+GL+ K+ D
Sbjct: 151 KNLLLEQKIEFKQQEVTSLDAVADAGYDVIVNCAGLYGGKLAGD 194
>AF067214-6|AAC17005.2| 457|Caenorhabditis elegans Hypothetical
protein F56C3.2 protein.
Length = 457
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 141 ECLSQYSVECVKPRTLQWISSVANDDEIKITEDLSIVK 254
EC + CVKPRTL+ I N DE + E IV+
Sbjct: 301 ECQMAEMLSCVKPRTLEKIVLQKNYDENQTIELKEIVQ 338
>Z73906-12|CAE17767.1| 170|Caenorhabditis elegans Hypothetical
protein D2030.12 protein.
Length = 170
Score = 28.3 bits (60), Expect = 3.5
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Frame = +3
Query: 147 LSQYSVECVKPRTLQWISSVANDDEIKI-----TEDLSIVKTGTVEDDESADPRLAK--D 305
LS + + C+ + WI S+ N ++ TED K+ V DE L K +
Sbjct: 71 LSAFGIRCLVFKARDWIHSIENKPSPQVILLMPTEDGKYRKSSKVYTDEQTRQILDKLRE 130
Query: 306 PAYEMFDKVDKFLQSHTLRVKVPEEITKSAASEYVP 413
+ E+F + + T R + P+ +S + VP
Sbjct: 131 DSIELFSESVRASSMETRRNRPPKLSERSFKNWKVP 166
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 27.5 bits (58), Expect = 6.2
Identities = 26/101 (25%), Positives = 40/101 (39%)
Frame = +3
Query: 207 ANDDEIKITEDLSIVKTGTVEDDESADPRLAKDPAYEMFDKVDKFLQSHTLRVKVPEEIT 386
A ++ +K E LS K DE D A D + + D+ R+ E +
Sbjct: 926 AEEEVMKENELLSSFKYANFAIDEEKDIAAATDEWAAIIPEEDRN------RILEEERMK 979
Query: 387 KSAASEYVPRSLLTDLPSELDMPLDGEDEAEVVEGRKKKIK 509
+ A PR +P ++ +DE E G+KKK K
Sbjct: 980 ELAEMNLAPRQRKQPIPQVVEDDDGDDDEEEDDTGKKKKKK 1020
>Z36238-1|CAA85275.2| 400|Caenorhabditis elegans Hypothetical
protein R74.2 protein.
Length = 400
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 384 TKSAASEYVPRSLLTDLPSELDMPLDGEDEAEVVEGRKKKIK 509
TKS SE V + P+E+ G+DE ++++ RKKK K
Sbjct: 280 TKSGTSEAVTSDDVDVEPTEIKKSKLGDDE-DLIDDRKKKAK 320
>AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical
protein Y66A7A.5 protein.
Length = 685
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 252 KTGTVEDDESADPRLAKDPAYEM 320
K+ +EDD+ PRLAK P EM
Sbjct: 647 KSPKLEDDDDPPPRLAKMPRLEM 669
>AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5
protein.
Length = 738
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 252 KTGTVEDDESADPRLAKDPAYEM 320
K+ +EDD+ PRLAK P EM
Sbjct: 700 KSPKLEDDDDPPPRLAKMPRLEM 722
>AC092690-3|AAK73857.1| 1145|Caenorhabditis elegans Hypothetical
protein BE0003N10.3 protein.
Length = 1145
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +3
Query: 123 VKNIYNECLSQYSVEC---VKPRTLQWISSVANDDEIKITEDLSIV 251
VK ++EC++ + K L+W+S + D++ I EDL ++
Sbjct: 98 VKKQFSECITPIVNQWKGRAKEMNLEWVSKASICDKLPIFEDLKVI 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,960,113
Number of Sequences: 27780
Number of extensions: 246938
Number of successful extensions: 844
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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