Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS317D04f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical pr... 246 1e-65
U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical pr... 47 7e-06
L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical p... 41 6e-04
Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical pr... 33 0.12
AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical... 33 0.12
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 31 0.38
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 31 0.38
AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical ... 31 0.50
AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical ... 31 0.50
AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical ... 31 0.50
U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical p... 29 1.5
U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical p... 29 1.5
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 29 2.0
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC024818-1|AAK29945.2| 375|Caenorhabditis elegans Hypothetical ... 29 2.0
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 29 2.7
AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical ... 29 2.7
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 29 2.7
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z93393-2|CAB07689.2| 890|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical pr... 28 4.7
U97196-2|AAB52461.2| 268|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical ... 28 4.7
AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical ... 28 4.7
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 28 4.7
U97005-11|AAB52288.1| 891|Caenorhabditis elegans Hypothetical p... 27 6.2
U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated p... 27 6.2
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 27 6.2
AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical ... 27 6.2
AF106577-10|AAC78189.1| 796|Caenorhabditis elegans Hypothetical... 27 6.2
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c... 27 8.1
>Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical
protein W08E3.3 protein.
Length = 395
Score = 246 bits (601), Expect = 1e-65
Identities = 111/142 (78%), Positives = 130/142 (91%)
Frame = +3
Query: 69 LIGRVGTNLKVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYL 248
LIGR+GTNLKVGI+G+PNVGKSTFFNVLTKS+A AENFPFCTIDPNESRV V D+R+D+L
Sbjct: 14 LIGRLGTNLKVGILGLPNVGKSTFFNVLTKSEAQAENFPFCTIDPNESRVAVQDDRFDWL 73
Query: 249 CEYHKPASKVPAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDEDVIH 428
++KPASKVPAFLNV DIAGLV+GA+EGQGLGNAFLSH+ ACDA+F+LCRAFDD+DV H
Sbjct: 74 VNHYKPASKVPAFLNVTDIAGLVKGASEGQGLGNAFLSHVSACDALFHLCRAFDDDDVTH 133
Query: 429 VDGDVNPVRDLETIAEELRLKD 494
V+G+V+PVRDLE I+ EL KD
Sbjct: 134 VEGEVDPVRDLEIISNELFAKD 155
>U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical
protein C26E6.12 protein.
Length = 390
Score = 48.0 bits (109), Expect = 4e-06
Identities = 33/138 (23%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Frame = +3
Query: 99 VGIVGVPNVGKSTFFNVLTKSQAA-AENFPFCTIDPNESRVPVPDERYDYLCEYHKPASK 275
+G++G PN GKST L ++ ++ F T++P +V + ++ E
Sbjct: 164 IGLLGFPNAGKSTLLKALVPEKSVKIADYAFTTVNP---QVAFFKNKEEFSVE------- 213
Query: 276 VPAF-LNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNL--CRAFDDEDVIHVDGDVN 446
P+F L++ D+ G++ GA+ +G G FL H++ D + + C+ F ++ + N
Sbjct: 214 DPSFTLSIADLPGIIEGASMNRGKGYKFLKHLEYADIVVMVVDCQGFQLKNELDCPFR-N 272
Query: 447 PVRDLETIAEELRLKDEE 500
P+ + + E+ L +++
Sbjct: 273 PLESIALLNREVELYNQK 290
>Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical
protein M01E5.2 protein.
Length = 358
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/96 (28%), Positives = 50/96 (52%)
Frame = +3
Query: 102 GIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASKVP 281
G+VG PN GKS+ +++++ ++PF T+ P+ V D ++ +
Sbjct: 192 GLVGFPNAGKSSLLRAISRAKPKVASYPFTTLHPHIGVVFYED--FEQIA---------- 239
Query: 282 AFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIF 389
V DI GL+ + +GLG +FL HI+ C++++
Sbjct: 240 ----VADIPGLIEDSHLNKGLGISFLKHIERCESLW 271
>L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical
protein C02F5.3 protein.
Length = 366
Score = 40.7 bits (91), Expect = 6e-04
Identities = 28/103 (27%), Positives = 51/103 (49%)
Frame = +3
Query: 96 KVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASK 275
+V +VG P+VGKST + +T + + A + F T+ +P + Y+
Sbjct: 64 RVAMVGFPSVGKSTLLSSMTSTHSEAAGYEFTTL------TCIPG-----VISYN----- 107
Query: 276 VPAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRA 404
A + ++D+ G++ GA++G+G G +S K D I + A
Sbjct: 108 -GANIQLLDLPGIIEGASQGKGRGRQVISVAKTADLILMMLDA 149
>Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical
protein K01C8.9 protein.
Length = 556
Score = 36.3 bits (80), Expect = 0.013
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 81 VGTNLKVGIVGVPNVGKSTFFNVLTKSQAA-AENFPFCTIDPNE 209
+ T+++VG+VG PNVGKS+ N L + +A N P T + E
Sbjct: 256 IKTSIRVGVVGFPNVGKSSVINSLKRRKACNVGNLPGITKEIQE 299
>Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 33.1 bits (72), Expect = 0.12
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +3
Query: 96 KVGIVGVPNVGKSTFFNVLTK--SQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPA 269
++G VG P+VGKST L S+ AA F T P R +K A
Sbjct: 64 RIGFVGFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIR--------------YKGA 109
Query: 270 SKVPAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAI 386
+ ++D+ G++ GA +G+G G ++ + C I
Sbjct: 110 K-----IQLLDLPGIIEGAKDGKGRGKQVIAVARTCSLI 143
>AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 33.1 bits (72), Expect = 0.12
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +3
Query: 96 KVGIVGVPNVGKSTFFNVLTK--SQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPA 269
++G VG P+VGKST L S+ AA F T P R +K A
Sbjct: 64 RIGFVGFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIR--------------YKGA 109
Query: 270 SKVPAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAI 386
+ ++D+ G++ GA +G+G G ++ + C I
Sbjct: 110 K-----IQLLDLPGIIEGAKDGKGRGKQVIAVARTCSLI 143
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 105 IVGVPNVGKSTFFNVLTKSQAAAENFPFCT 194
+ G PNVGKS+F N +T++ + + F T
Sbjct: 174 LCGFPNVGKSSFINNVTRADVEVQPYAFTT 203
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 105 IVGVPNVGKSTFFNVLTKSQAAAENFPFCT 194
+ G PNVGKS+F N +T++ + + F T
Sbjct: 174 LCGFPNVGKSSFINNVTRADVEVQPYAFTT 203
>AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical
protein T19A6.2c protein.
Length = 610
Score = 31.1 bits (67), Expect = 0.50
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 93 LKVGIVGVPNVGKSTFFNVLTKSQ 164
+ VG +G PNVGKS+ N L K +
Sbjct: 326 ISVGFIGYPNVGKSSLVNTLRKKK 349
>AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical
protein T19A6.2b protein.
Length = 592
Score = 31.1 bits (67), Expect = 0.50
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 93 LKVGIVGVPNVGKSTFFNVLTKSQ 164
+ VG +G PNVGKS+ N L K +
Sbjct: 267 ISVGFIGYPNVGKSSLVNTLRKKK 290
>AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical
protein T19A6.2a protein.
Length = 651
Score = 31.1 bits (67), Expect = 0.50
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 93 LKVGIVGVPNVGKSTFFNVLTKSQ 164
+ VG +G PNVGKS+ N L K +
Sbjct: 326 ISVGFIGYPNVGKSSLVNTLRKKK 349
>U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical
protein T02G5.13b protein.
Length = 298
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 75 GRVGTNLKVGIVGVPNVGKSTFFNVL--TKSQAAAENFPFCTIDPNES 212
GR +VGI G P VGKS+F L ++ + TIDP +
Sbjct: 18 GRDSMIFRVGISGSPGVGKSSFIEALGAELTENRGKKVAVLTIDPTSA 65
>U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical
protein T02G5.13a protein.
Length = 399
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 75 GRVGTNLKVGIVGVPNVGKSTFFNVL--TKSQAAAENFPFCTIDPNES 212
GR +VGI G P VGKS+F L ++ + TIDP +
Sbjct: 119 GRDSMIFRVGISGSPGVGKSSFIEALGAELTENRGKKVAVLTIDPTSA 166
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 136 HSSMFLPRVKQQLKTFLSAPSTLMRVGYLYL---MKGMTTYANIINQQAKCQLSSTW 297
H +MF + ++ ++ P L V L L + GMT + + INQ+A +S W
Sbjct: 1102 HPAMFYDKDAEEHIEYVDEPDRLSAVKALLLTRDLNGMTPFQSAINQRAYGAATSIW 1158
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 136 HSSMFLPRVKQQLKTFLSAPSTLMRVGYLYL---MKGMTTYANIINQQAKCQLSSTW 297
H +MF + ++ ++ P L V L L + GMT + + INQ+A +S W
Sbjct: 1102 HPAMFYDKDAEEHIEYVDEPDRLSAVKALLLTRDLNGMTPFQSAINQRAYGAATSIW 1158
>AC024818-1|AAK29945.2| 375|Caenorhabditis elegans Hypothetical
protein Y54H5A.2 protein.
Length = 375
Score = 29.1 bits (62), Expect = 2.0
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +3
Query: 228 DERYDYLCEYHKPASKVPAFLNVVDIAGL-VRGAAEGQGLGNAFLSHIKACDAIFNLCRA 404
D +YLC P V L+ +IA L VR + ++ + K +A+F LC
Sbjct: 235 DTSDEYLCSILAPLMDVNDNLDEEEIAKLPVRLQYYEKERDSSDIVRQKLIEALFQLCAT 294
Query: 405 FDDEDVIHVDGDVNPVRDLETIAEELRLKDEEQLL 509
+V+ G +R+L+ E K ++ LL
Sbjct: 295 KHGREVLRAKGVYPAMRELDKGTETAEDKHKKTLL 329
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 93 LKVGIVGVPNVGKSTFFNVLTKSQAAAENFP 185
+++ +VG+ N GK+TF NV+ Q + P
Sbjct: 21 MELTLVGLQNSGKTTFVNVIASGQFTEDMIP 51
>AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical
protein Y67D2.4 protein.
Length = 313
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 81 VGTNLKVGIVGVPNVGKSTFFNVL 152
V T + +VG+PNVGKS+ N +
Sbjct: 112 VKTEYQAMVVGIPNVGKSSLINAI 135
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 93 LKVGIVGVPNVGKSTFFNVLTKSQAAAENFP 185
+++ +VG+ N GK+TF NV+ Q + P
Sbjct: 21 MELTLVGLQNSGKTTFVNVIASGQFTEDMIP 51
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 81 VGTNLKVGIVGVPNVGKST-FFNVLTKSQ 164
+G K+ +VG+ N GK+T +N +TK Q
Sbjct: 14 IGKKYKIIVVGLDNAGKTTILYNYVTKDQ 42
>Z93393-2|CAB07689.2| 890|Caenorhabditis elegans Hypothetical
protein Y48E1B.2a protein.
Length = 890
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 6/31 (19%)
Frame = +3
Query: 87 TNLKVG------IVGVPNVGKSTFFNVLTKS 161
TN+K+G +VG N GKST FN L +S
Sbjct: 497 TNVKLGMRGDIFLVGCTNAGKSTMFNALLQS 527
>Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical
protein E02H1.2 protein.
Length = 394
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 93 LKVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNES 212
L++ ++G PNVGKS N L + +A + T N S
Sbjct: 34 LQLAVIGAPNVGKSLLTNSLIRCPLSAVSSKMDTTTRNIS 73
>Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical
protein E02H1.2 protein.
Length = 394
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 93 LKVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNES 212
L++ ++G PNVGKS N L + +A + T N S
Sbjct: 34 LQLAVIGAPNVGKSLLTNSLIRCPLSAVSSKMDTTTRNIS 73
>U97196-2|AAB52461.2| 268|Caenorhabditis elegans Hypothetical
protein B0207.6 protein.
Length = 268
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 105 IVGVPNVGKSTFFNVLTKSQAAAENFPFCTI--DP-NESRVPVPD 230
++G P GKSTF LT + + PF TI DP N++ PD
Sbjct: 6 VIGAPGAGKSTFCAGLTDIFSQTKR-PFLTINLDPANDTMAYAPD 49
>AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical
protein C53H9.2c protein.
Length = 247
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 99 VGIVGVPNVGKSTFFNVL 152
VG+VG PNVGKS+ N L
Sbjct: 132 VGMVGYPNVGKSSTINKL 149
>AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical
protein C53H9.2b protein.
Length = 385
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 99 VGIVGVPNVGKSTFFNVL 152
VG+VG PNVGKS+ N L
Sbjct: 132 VGMVGYPNVGKSSTINKL 149
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 99 VGIVGVPNVGKSTFFNVL 152
VG+VG PNVGKS+ N L
Sbjct: 301 VGMVGYPNVGKSSTINKL 318
>U97005-11|AAB52288.1| 891|Caenorhabditis elegans Hypothetical
protein F19F10.10 protein.
Length = 891
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 357 LSHIK-ACDAIFNLCRAFDDEDVIHV-DGDVNPVRDLETIAEELRL 488
+SH+ ACD IF++ R ED++ V + D + TIA + RL
Sbjct: 757 ISHLTDACDEIFSIFRVRQPEDILDVKEIDTRVLGTAITIAGDKRL 802
>U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated
protein 2, isoform a protein.
Length = 1538
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 200 VDGAERKVFSCCLTLGKNIEECR 132
VD AERK CC ++GK I++ R
Sbjct: 357 VDEAERKKRGCCHSVGKFIKQLR 379
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 200 VDGAERKVFSCCLTLGKNIEECR 132
VD AERK CC ++GK I++ R
Sbjct: 357 VDEAERKKRGCCHSVGKFIKQLR 379
>AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical
protein C26G2.2 protein.
Length = 952
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 192 TIDPNESRVPVPDERYDYLCEYHKPASKVPAFLNVVDIAGLVRGAAE 332
+IDPN +V V ++RY Y + P S F N + L+ G+++
Sbjct: 185 SIDPNFQKVIVYNDRYSYCLDTKSPGSLHVTFGN--GLINLIGGSSD 229
>AF106577-10|AAC78189.1| 796|Caenorhabditis elegans Hypothetical
protein F46F5.11 protein.
Length = 796
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 339 GLGNAFLSHIKACDAIFNLCRAFDDEDVIHVDGDVN 446
GL N + A DAIFN+ + D V H+ G N
Sbjct: 572 GLSNVEGYFLMADDAIFNIWQRIDYSRVFHLHGSYN 607
>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical protein
C48B4.4c protein.
Length = 1704
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 102 GIVGVPNVGKSTFFNVLTKSQAAA 173
G++GV GK+T FN+LT A+
Sbjct: 1408 GLLGVNGAGKTTTFNILTGQSFAS 1431
>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical protein
C48B4.4b protein.
Length = 1691
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 102 GIVGVPNVGKSTFFNVLTKSQAAA 173
G++GV GK+T FN+LT A+
Sbjct: 1395 GLLGVNGAGKTTTFNILTGQSFAS 1418
>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical protein
C48B4.4a protein.
Length = 1689
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 102 GIVGVPNVGKSTFFNVLTKSQAAA 173
G++GV GK+T FN+LT A+
Sbjct: 1393 GLLGVNGAGKTTTFNILTGQSFAS 1416
>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
cassette transporter protein.
Length = 1704
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 102 GIVGVPNVGKSTFFNVLTKSQAAA 173
G++GV GK+T FN+LT A+
Sbjct: 1408 GLLGVNGAGKTTTFNILTGQSFAS 1431
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,088,843
Number of Sequences: 27780
Number of extensions: 201296
Number of successful extensions: 840
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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